RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 ANKRD30BQ9BXX2 1392 aa32.7■■■□□ 2.82
NPAS3-211ENST00000551634 DNMT1P26358 1616 aaKnown RBP32.68■■■□□ 2.82
NPAS3-211ENST00000551634 CCDC7Q96M83 1385 aa32.68■■■□□ 2.82
NPAS3-211ENST00000551634 ABCC5O15440 1437 aa32.62■■■□□ 2.81
NPAS3-211ENST00000551634 TEX14Q8IWB6 1497 aa32.62■■■□□ 2.81
NPAS3-211ENST00000551634 PRKRIP1Q9H875 184 aaPredicted RBP32.61■■■□□ 2.81
NPAS3-211ENST00000551634 MRC2Q9UBG0 1479 aa32.59■■■□□ 2.81
NPAS3-211ENST00000551634 POLR1AO95602 1720 aaPredicted RBP32.58■■■□□ 2.81
NPAS3-211ENST00000551634 KIAA0586Q9BVV6 1533 aa32.58■■■□□ 2.81
NPAS3-211ENST00000551634 KIAA0556O60303 1618 aa32.57■■■□□ 2.81
NPAS3-211ENST00000551634 SPATA31E1Q6ZUB1 1445 aa32.56■■■□□ 2.8
NPAS3-211ENST00000551634 C11orf95C9JLR9 678 aaPredicted RBP32.56■■■□□ 2.8
NPAS3-211ENST00000551634 FOXD1Q16676 465 aa32.56■■■□□ 2.8
NPAS3-211ENST00000551634 DISP1Q96F81 1524 aa32.54■■■□□ 2.8
NPAS3-211ENST00000551634 NBPF8Q3BBV2 869 aa32.54■■■□□ 2.8
NPAS3-211ENST00000551634 NUP153P49790 1475 aaKnown RBP32.53■■■□□ 2.8
NPAS3-211ENST00000551634 CDK11AQ9UQ88 783 aaPredicted RBP32.53■■■□□ 2.8
NPAS3-211ENST00000551634 RAPGEF6Q8TEU7 1601 aa32.51■■■□□ 2.79
NPAS3-211ENST00000551634 CCDC184Q52MB2 194 aa32.5■■■□□ 2.79
NPAS3-211ENST00000551634 IFT140Q96RY7 1462 aa32.5■■■□□ 2.79
NPAS3-211ENST00000551634 SLC4A1APQ9BWU0 796 aaKnown RBP32.5■■■□□ 2.79
NPAS3-211ENST00000551634 ARID3CA6NKF2 412 aa32.48■■■□□ 2.79
NPAS3-211ENST00000551634 ZBED9Q6R2W3 1325 aa32.48■■■□□ 2.79
NPAS3-211ENST00000551634 MRS2Q9HD23 443 aa32.45■■■□□ 2.79
NPAS3-211ENST00000551634 PPP4R2Q9NY27 417 aa32.45■■■□□ 2.79
NPAS3-211ENST00000551634 KIF7Q2M1P5 1343 aa32.45■■■□□ 2.78
NPAS3-211ENST00000551634 ZNF644Q9H582 1327 aaPredicted RBP32.43■■■□□ 2.78
NPAS3-211ENST00000551634 FANCIQ9NVI1 1328 aa32.43■■■□□ 2.78
NPAS3-211ENST00000551634 PZPP20742 1482 aa32.41■■■□□ 2.78
NPAS3-211ENST00000551634 IRX6P78412 446 aaPredicted RBP32.41■■■□□ 2.78
NPAS3-211ENST00000551634 TROQ12816 1431 aaPredicted RBP32.4■■■□□ 2.78
NPAS3-211ENST00000551634 ITSN2Q9NZM3 1697 aa32.39■■■□□ 2.78
NPAS3-211ENST00000551634 ADGBQ8N7X0 1667 aa32.39■■■□□ 2.78
NPAS3-211ENST00000551634 FAM9BQ8IZU0 186 aa32.39■■■□□ 2.78
NPAS3-211ENST00000551634 ZNF608Q9ULD9 1512 aaPredicted RBP32.37■■■□□ 2.77
NPAS3-211ENST00000551634 CAMSAP2Q08AD1 1489 aa32.36■■■□□ 2.77
NPAS3-211ENST00000551634 ADGRL2O95490 1459 aa32.36■■■□□ 2.77
NPAS3-211ENST00000551634 GRIN2AQ12879 1464 aa32.36■■■□□ 2.77
NPAS3-211ENST00000551634 MBD5Q9P267 1494 aa32.36■■■□□ 2.77
NPAS3-211ENST00000551634 KIAA1107Q9UPP5 1409 aa32.32■■■□□ 2.76
NPAS3-211ENST00000551634 ADCY10Q96PN6 1610 aa32.31■■■□□ 2.76
NPAS3-211ENST00000551634 CFDP1Q9UEE9 299 aaPredicted RBP32.3■■■□□ 2.76
NPAS3-211ENST00000551634 ARID4BQ4LE39 1312 aaPredicted RBP32.29■■■□□ 2.76
NPAS3-211ENST00000551634 GPATCH8Q9UKJ3 1502 aaKnown RBP32.29■■■□□ 2.76
NPAS3-211ENST00000551634 PRG4Q92954 1404 aaPredicted RBP32.29■■■□□ 2.76
NPAS3-211ENST00000551634 CROCC2H7BZ55 1655 aa32.28■■■□□ 2.76
NPAS3-211ENST00000551634 MSH5O43196 834 aa32.27■■■□□ 2.76
NPAS3-211ENST00000551634 DHX29Q7Z478 1369 aaKnown RBP32.25■■■□□ 2.75
NPAS3-211ENST00000551634 KIF14Q15058 1648 aa32.25■■■□□ 2.75
NPAS3-211ENST00000551634 ANKRD30AQ9BXX3 1397 aa32.22■■■□□ 2.75
NPAS3-211ENST00000551634 USP47Q96K76 1375 aa32.22■■■□□ 2.75
NPAS3-211ENST00000551634 EIF4G3O43432 1585 aaKnown RBP32.21■■■□□ 2.75
NPAS3-211ENST00000551634 SMG6Q86US8 1419 aaKnown RBP32.19■■■□□ 2.74
NPAS3-211ENST00000551634 BCORL1Q5H9F3 1711 aa32.18■■■□□ 2.74
NPAS3-211ENST00000551634 KDM5CP41229 1560 aa32.18■■■□□ 2.74
NPAS3-211ENST00000551634 MAGI1Q96QZ7 1491 aaPredicted RBP32.17■■■□□ 2.74
NPAS3-211ENST00000551634 UHRF1BP1Q6BDS2 1440 aa32.17■■■□□ 2.74
NPAS3-211ENST00000551634 PLB1Q6P1J6 1458 aa32.15■■■□□ 2.74
NPAS3-211ENST00000551634 PKD2Q13563 968 aa32.15■■■□□ 2.74
NPAS3-211ENST00000551634 ROCK2O75116 1388 aaKnown RBP32.14■■■□□ 2.74
NPAS3-211ENST00000551634 ANKRD50Q9ULJ7 1429 aa32.14■■■□□ 2.74
NPAS3-211ENST00000551634 SHANK2Q9UPX8 1470 aa32.11■■■□□ 2.73
NPAS3-211ENST00000551634 RALGAPBQ86X10 1494 aa32.11■■■□□ 2.73
NPAS3-211ENST00000551634 CARMIL2Q6F5E8 1435 aa32.1■■■□□ 2.73
NPAS3-211ENST00000551634 ARHGEF12Q9NZN5 1544 aa32.1■■■□□ 2.73
NPAS3-211ENST00000551634 CEP170Q5SW79 1584 aa32.1■■■□□ 2.73
NPAS3-211ENST00000551634 B4GALNT3Q6L9W6 998 aa32.09■■■□□ 2.73
NPAS3-211ENST00000551634 ZNF777Q9ULD5 760 aaPredicted RBP32.08■■■□□ 2.73
NPAS3-211ENST00000551634 SYNJ2O15056 1496 aa32.08■■■□□ 2.73
NPAS3-211ENST00000551634 NUDCQ9Y266 331 aa32.06■■■□□ 2.72
NPAS3-211ENST00000551634 RNF123Q5XPI4 1314 aa32.06■■■□□ 2.72
NPAS3-211ENST00000551634 FBLN2P98095 1184 aa32.06■■■□□ 2.72
NPAS3-211ENST00000551634 KDM5DQ9BY66 1539 aa32.06■■■□□ 2.72
NPAS3-211ENST00000551634 ERICH6Q7L0X2 663 aa32.04■■■□□ 2.72
NPAS3-211ENST00000551634 CHMP7Q8WUX9 453 aaPredicted RBP32.03■■■□□ 2.72
NPAS3-211ENST00000551634 ZNF326Q5BKZ1 582 aaKnown RBP32.02■■■□□ 2.72
NPAS3-211ENST00000551634 CDC42BPAQ5VT25 1732 aa32.02■■■□□ 2.72
NPAS3-211ENST00000551634 ABCC10Q5T3U5 1492 aa32■■■□□ 2.71
NPAS3-211ENST00000551634 C9orf84Q5VXU9 1444 aa32■■■□□ 2.71
NPAS3-211ENST00000551634 NUP155O75694 1391 aa31.99■■■□□ 2.71
NPAS3-211ENST00000551634 NUP160Q12769 1436 aa31.98■■■□□ 2.71
NPAS3-211ENST00000551634 PLEKHD1A6NEE1 506 aa31.98■■■□□ 2.71
NPAS3-211ENST00000551634 KTN1Q86UP2 1357 aaKnown RBP31.98■■■□□ 2.71
NPAS3-211ENST00000551634 PNISRQ8TF01 805 aaKnown RBP31.98■■■□□ 2.71
NPAS3-211ENST00000551634 KIF15Q9NS87 1388 aa31.96■■■□□ 2.71
NPAS3-211ENST00000551634 JPH4Q96JJ6 628 aa31.96■■■□□ 2.71
NPAS3-211ENST00000551634 POLR3GLQ9BT43 218 aa31.96■■■□□ 2.71
NPAS3-211ENST00000551634 ABCA8O94911 1581 aa31.96■■■□□ 2.71
NPAS3-211ENST00000551634 CARD11Q9BXL7 1154 aa31.95■■■□□ 2.7
NPAS3-211ENST00000551634 PTPRGP23470 1445 aa31.94■■■□□ 2.7
NPAS3-211ENST00000551634 TMC1Q8TDI8 760 aa31.91■■■□□ 2.7
NPAS3-211ENST00000551634 TSPY4P0CV99 314 aa31.91■■■□□ 2.7
NPAS3-211ENST00000551634 TSPY10P0CW01 314 aa31.91■■■□□ 2.7
NPAS3-211ENST00000551634 ARHGEF5Q12774 1597 aa31.9■■■□□ 2.7
NPAS3-211ENST00000551634 ATP10BO94823 1461 aa31.89■■■□□ 2.7
NPAS3-211ENST00000551634 BRD4O60885 1362 aaPredicted RBP31.88■■■□□ 2.69
NPAS3-211ENST00000551634 LRPPRCP42704 1394 aaKnown RBP31.88■■■□□ 2.69
NPAS3-211ENST00000551634 RALBP1Q15311 655 aa31.86■■■□□ 2.69
NPAS3-211ENST00000551634 MYT1LQ9UL68 1186 aa31.86■■■□□ 2.69
NPAS3-211ENST00000551634 BCL11AQ9H165 835 aa31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms