RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 KDM5BQ9UGL1 1544 aa29.07■■■□□ 2.24
SSH1-209ENST00000551165 CLSPNQ9HAW4 1339 aa29.07■■■□□ 2.24
SSH1-209ENST00000551165 DNMT1P26358 1616 aaKnown RBP29.06■■■□□ 2.24
SSH1-209ENST00000551165 MAPKBP1O60336 1514 aa29.06■■■□□ 2.24
SSH1-209ENST00000551165 KCNH8Q96L42 1107 aa29.04■■■□□ 2.24
SSH1-209ENST00000551165 TTC37Q6PGP7 1564 aa29■■■□□ 2.23
SSH1-209ENST00000551165 KDM6BO15054 1643 aa29■■■□□ 2.23
SSH1-209ENST00000551165 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29■■■□□ 2.23
SSH1-209ENST00000551165 GCC2Q8IWJ2 1684 aa28.97■■■□□ 2.23
SSH1-209ENST00000551165 CDC42BPBQ9Y5S2 1711 aa28.97■■■□□ 2.23
SSH1-209ENST00000551165 AKNAQ7Z591 1439 aa28.95■■■□□ 2.23
SSH1-209ENST00000551165 PREX2Q70Z35 1606 aa28.93■■■□□ 2.22
SSH1-209ENST00000551165 ROCK1Q13464 1354 aa28.91■■■□□ 2.22
SSH1-209ENST00000551165 HNRNPMP52272 730 aaKnown RBP eCLIP28.9■■■□□ 2.227e-6■■□□□ 14.2
SSH1-209ENST00000551165 SAMD9LQ8IVG5 1584 aa28.89■■■□□ 2.22
SSH1-209ENST00000551165 SIN3AQ96ST3 1273 aa28.88■■■□□ 2.21
SSH1-209ENST00000551165 CROCC2H7BZ55 1655 aa28.87■■■□□ 2.21
SSH1-209ENST00000551165 ARHGAP5Q13017 1502 aa28.85■■■□□ 2.21
SSH1-209ENST00000551165 NCOA1Q15788 1441 aa28.84■■■□□ 2.21
SSH1-209ENST00000551165 MBD5Q9P267 1494 aa28.84■■■□□ 2.21
SSH1-209ENST00000551165 MYO5CQ9NQX4 1742 aa28.83■■■□□ 2.21
SSH1-209ENST00000551165 TRIM52Q96A61 297 aa28.81■■■□□ 2.2
SSH1-209ENST00000551165 WDR7Q9Y4E6 1490 aa28.8■■■□□ 2.2
SSH1-209ENST00000551165 NEUROD1Q13562 356 aa28.8■■■□□ 2.2
SSH1-209ENST00000551165 ADGBQ8N7X0 1667 aa28.8■■■□□ 2.2
SSH1-209ENST00000551165 ADGRL2O95490 1459 aa28.79■■■□□ 2.2
SSH1-209ENST00000551165 PLCH2O75038 1416 aa28.77■■■□□ 2.2
SSH1-209ENST00000551165 C9orf84Q5VXU9 1444 aa28.77■■■□□ 2.2
SSH1-209ENST00000551165 DENND4BO75064 1496 aaPredicted RBP28.77■■■□□ 2.2
SSH1-209ENST00000551165 ASXL2Q76L83 1435 aa28.77■■■□□ 2.2
SSH1-209ENST00000551165 SYCP2Q9BX26 1530 aa28.77■■■□□ 2.2
SSH1-209ENST00000551165 ARHGEF5Q12774 1597 aa28.76■■■□□ 2.19
SSH1-209ENST00000551165 ANKRD30AQ9BXX3 1397 aa28.74■■■□□ 2.19
SSH1-209ENST00000551165 SHANK2Q9UPX8 1470 aa28.73■■■□□ 2.19
SSH1-209ENST00000551165 TSPY4P0CV99 314 aa28.73■■■□□ 2.19
SSH1-209ENST00000551165 TSPY10P0CW01 314 aa28.73■■■□□ 2.19
SSH1-209ENST00000551165 CCDC141Q6ZP82 1450 aa28.72■■■□□ 2.19
SSH1-209ENST00000551165 ARHGEF12Q9NZN5 1544 aa28.71■■■□□ 2.19
SSH1-209ENST00000551165 MPHOSPH9Q99550 1183 aa28.69■■■□□ 2.18
SSH1-209ENST00000551165 NPM1P06748 294 aaKnown RBP eCLIP28.69■■■□□ 2.18
SSH1-209ENST00000551165 EFCAB2Q5VUJ9 269 aa28.67■■■□□ 2.18
SSH1-209ENST00000551165 FOXD1Q16676 465 aa28.66■■■□□ 2.18
SSH1-209ENST00000551165 ANKRD50Q9ULJ7 1429 aa28.64■■■□□ 2.18
SSH1-209ENST00000551165 KIAA1107Q9UPP5 1409 aa28.64■■■□□ 2.18
SSH1-209ENST00000551165 CYB5RLQ6IPT4 315 aa28.64■■■□□ 2.18
SSH1-209ENST00000551165 ZNF316A6NFI3 1004 aaPredicted RBP28.64■■■□□ 2.17
SSH1-209ENST00000551165 RSPH4AQ5TD94 716 aa28.63■■■□□ 2.17
SSH1-209ENST00000551165 ABCA9Q8IUA7 1624 aa28.63■■■□□ 2.17
SSH1-209ENST00000551165 KIF15Q9NS87 1388 aa28.62■■■□□ 2.17
SSH1-209ENST00000551165 PLEKHH2Q8IVE3 1493 aa28.61■■■□□ 2.17
SSH1-209ENST00000551165 RIMBP3CA6NJZ7 1639 aa28.6■■■□□ 2.17
SSH1-209ENST00000551165 RIMBP3BA6NNM3 1639 aa28.6■■■□□ 2.17
SSH1-209ENST00000551165 RIMBP3Q9UFD9 1639 aa28.6■■■□□ 2.17
SSH1-209ENST00000551165 ABCC1P33527 1531 aa28.6■■■□□ 2.17
SSH1-209ENST00000551165 TRAPPC8Q9Y2L5 1435 aa28.58■■■□□ 2.17
SSH1-209ENST00000551165 PZPP20742 1482 aa28.57■■■□□ 2.16
SSH1-209ENST00000551165 SLC4A1APQ9BWU0 796 aaKnown RBP28.57■■■□□ 2.16
SSH1-209ENST00000551165 ARAP3Q8WWN8 1544 aa28.56■■■□□ 2.16
SSH1-209ENST00000551165 MAST1Q9Y2H9 1570 aa28.54■■■□□ 2.16
SSH1-209ENST00000551165 FANCAO15360 1455 aa28.54■■■□□ 2.16
SSH1-209ENST00000551165 AFAP1Q8N556 730 aa28.52■■■□□ 2.16
SSH1-209ENST00000551165 TIMELESSQ9UNS1 1208 aa28.49■■■□□ 2.15
SSH1-209ENST00000551165 ACIN1Q9UKV3 1341 aaKnown RBP28.48■■■□□ 2.15
SSH1-209ENST00000551165 TONSLQ96HA7 1378 aa28.47■■■□□ 2.15
SSH1-209ENST00000551165 PPP1R15AO75807 674 aaPredicted RBP28.47■■■□□ 2.15
SSH1-209ENST00000551165 ANKRD30BQ9BXX2 1392 aa28.46■■■□□ 2.15
SSH1-209ENST00000551165 NUP155O75694 1391 aa28.46■■■□□ 2.15
SSH1-209ENST00000551165 PLXNC1O60486 1568 aa28.44■■■□□ 2.14
SSH1-209ENST00000551165 DIEXFQ68CQ4 756 aaKnown RBP28.44■■■□□ 2.14
SSH1-209ENST00000551165 CD109Q6YHK3 1445 aa28.42■■■□□ 2.14
SSH1-209ENST00000551165 PKD2Q13563 968 aa28.42■■■□□ 2.14
SSH1-209ENST00000551165 ADGRL1O94910 1474 aa28.42■■■□□ 2.14
SSH1-209ENST00000551165 SCAPERQ9BY12 1400 aa28.42■■■□□ 2.14
SSH1-209ENST00000551165 SPAG9O60271 1321 aaKnown RBP28.4■■■□□ 2.14
SSH1-209ENST00000551165 KDM5DQ9BY66 1539 aa28.36■■■□□ 2.13
SSH1-209ENST00000551165 ZFYVE16Q7Z3T8 1539 aa28.36■■■□□ 2.13
SSH1-209ENST00000551165 DUOX2Q9NRD8 1548 aa28.35■■■□□ 2.13
SSH1-209ENST00000551165 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.33■■■□□ 2.13
SSH1-209ENST00000551165 RPRD2Q5VT52 1461 aaKnown RBP28.32■■■□□ 2.12
SSH1-209ENST00000551165 RTEL1-TNFRSF6BF6WH68 1400 aa28.31■■■□□ 2.12
SSH1-209ENST00000551165 L3MBTL2Q969R5 705 aa28.3■■■□□ 2.12
SSH1-209ENST00000551165 FAM135AQ9P2D6 1515 aa28.29■■■□□ 2.12
SSH1-209ENST00000551165 UNC13BO14795 1591 aa28.28■■■□□ 2.12
SSH1-209ENST00000551165 INO80Q9ULG1 1556 aaPredicted RBP28.28■■■□□ 2.12
SSH1-209ENST00000551165 ATP7AQ04656 1500 aa28.28■■■□□ 2.12
SSH1-209ENST00000551165 ERBINQ96RT1 1412 aa28.28■■■□□ 2.12
SSH1-209ENST00000551165 MYT1LQ9UL68 1186 aa28.26■■■□□ 2.12
SSH1-209ENST00000551165 TEX14Q8IWB6 1497 aa28.21■■■□□ 2.11
SSH1-209ENST00000551165 HIRIP3Q9BW71 556 aaPredicted RBP28.21■■■□□ 2.11
SSH1-209ENST00000551165 CFAP74Q9C0B2 1584 aa28.21■■■□□ 2.11
SSH1-209ENST00000551165 MAP3K4Q9Y6R4 1608 aa28.2■■■□□ 2.11
SSH1-209ENST00000551165 ZNF518AQ6AHZ1 1483 aa28.2■■■□□ 2.1
SSH1-209ENST00000551165 KIDINS220Q9ULH0 1771 aa28.19■■■□□ 2.1
SSH1-209ENST00000551165 MAGI2Q86UL8 1455 aa28.19■■■□□ 2.1
SSH1-209ENST00000551165 POGZQ7Z3K3 1410 aa28.18■■■□□ 2.1
SSH1-209ENST00000551165 IQGAP3Q86VI3 1631 aa28.18■■■□□ 2.1
SSH1-209ENST00000551165 FAM69CQ0P6D2 419 aa28.18■■■□□ 2.1
SSH1-209ENST00000551165 RAPGEF3O95398 923 aa28.16■■■□□ 2.1
SSH1-209ENST00000551165 GLI2P10070 1586 aa28.15■■■□□ 2.1
SSH1-209ENST00000551165 NEO1Q92859 1461 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms