RNA–Protein interactions for RNA: ENST00000550846.5

PFDN5-211, Transcript of prefoldin subunit 5, humanhuman

TSL 2 BASIC

Gene PFDN5, Length 392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-211ENST00000550846 POGZQ7Z3K3 1410 aa13.27□□□□□ -0.29
PFDN5-211ENST00000550846 ARHGAP35Q9NRY4 1499 aa13.27□□□□□ -0.29
PFDN5-211ENST00000550846 PLCH2O75038 1416 aa13.26□□□□□ -0.29
PFDN5-211ENST00000550846 KIF14Q15058 1648 aa13.26□□□□□ -0.29
PFDN5-211ENST00000550846 FBXO41Q8TF61 875 aa13.26□□□□□ -0.29
PFDN5-211ENST00000550846 FMN1Q68DA7 1419 aa13.25□□□□□ -0.29
PFDN5-211ENST00000550846 CHIC1Q5VXU3 224 aa13.24□□□□□ -0.29
PFDN5-211ENST00000550846 MYT1LQ9UL68 1186 aa13.24□□□□□ -0.29
PFDN5-211ENST00000550846 EFCAB2Q5VUJ9 269 aa13.22□□□□□ -0.29
PFDN5-211ENST00000550846 ARHGAP5Q13017 1502 aa13.22□□□□□ -0.29
PFDN5-211ENST00000550846 FER1L4A9Z1Z3 1794 aa13.22□□□□□ -0.29
PFDN5-211ENST00000550846 MAGI2Q86UL8 1455 aa13.22□□□□□ -0.29
PFDN5-211ENST00000550846 MYO5CQ9NQX4 1742 aa13.22□□□□□ -0.29
PFDN5-211ENST00000550846 CDK11AQ9UQ88 783 aaPredicted RBP13.21□□□□□ -0.29
PFDN5-211ENST00000550846 CEBPAP49715 358 aaPredicted RBP13.2□□□□□ -0.3
PFDN5-211ENST00000550846 AFAP1Q8N556 730 aa13.2□□□□□ -0.3
PFDN5-211ENST00000550846 ATP10AO60312 1499 aa13.2□□□□□ -0.3
PFDN5-211ENST00000550846 TROQ12816 1431 aaPredicted RBP13.2□□□□□ -0.3
PFDN5-211ENST00000550846 CLIP1P30622 1438 aa13.19□□□□□ -0.3
PFDN5-211ENST00000550846 C9orf84Q5VXU9 1444 aa13.19□□□□□ -0.3
PFDN5-211ENST00000550846 LRRIQ1Q96JM4 1722 aa13.19□□□□□ -0.3
PFDN5-211ENST00000550846 ARHGEF12Q9NZN5 1544 aa13.17□□□□□ -0.3
PFDN5-211ENST00000550846 ZNF518AQ6AHZ1 1483 aa13.16□□□□□ -0.3
PFDN5-211ENST00000550846 KDM5CP41229 1560 aa13.13□□□□□ -0.31
PFDN5-211ENST00000550846 DIP2CQ9Y2E4 1556 aa13.13□□□□□ -0.31
PFDN5-211ENST00000550846 TRAPPC8Q9Y2L5 1435 aa13.13□□□□□ -0.31
PFDN5-211ENST00000550846 ABCA6Q8N139 1617 aa13.12□□□□□ -0.31
PFDN5-211ENST00000550846 CDC42BPBQ9Y5S2 1711 aa13.11□□□□□ -0.31
PFDN5-211ENST00000550846 ZNF777Q9ULD5 760 aaPredicted RBP13.11□□□□□ -0.31
PFDN5-211ENST00000550846 CASKIN1Q8WXD9 1431 aa13.11□□□□□ -0.31
PFDN5-211ENST00000550846 PREX2Q70Z35 1606 aa13.1□□□□□ -0.31
PFDN5-211ENST00000550846 ABCC1P33527 1531 aa13.1□□□□□ -0.31
PFDN5-211ENST00000550846 PREX1Q8TCU6 1659 aa13.1□□□□□ -0.31
PFDN5-211ENST00000550846 CERKQ8TCT0 537 aa13.1□□□□□ -0.31
PFDN5-211ENST00000550846 CCDC18Q5T9S5 1454 aa13.1□□□□□ -0.31
PFDN5-211ENST00000550846 ESF1Q9H501 851 aaKnown RBP13.08□□□□□ -0.32
PFDN5-211ENST00000550846 ITSN2Q9NZM3 1697 aa13.08□□□□□ -0.32
PFDN5-211ENST00000550846 UHRF1BP1Q6BDS2 1440 aa13.07□□□□□ -0.32
PFDN5-211ENST00000550846 MLH3Q9UHC1 1453 aa13.06□□□□□ -0.32
PFDN5-211ENST00000550846 FYCO1Q9BQS8 1478 aa13.05□□□□□ -0.32
PFDN5-211ENST00000550846 CDC42BPAQ5VT25 1732 aa13.05□□□□□ -0.32
PFDN5-211ENST00000550846 SYCP2Q9BX26 1530 aa13.04□□□□□ -0.32
PFDN5-211ENST00000550846 HNRNPMP52272 730 aaKnown RBP eCLIP13.04□□□□□ -0.32
PFDN5-211ENST00000550846 C3P01024 1663 aa13.04□□□□□ -0.32
PFDN5-211ENST00000550846 REREQ9P2R6 1566 aa13.03□□□□□ -0.32
PFDN5-211ENST00000550846 STRCQ7RTU9 1775 aa13.03□□□□□ -0.32
PFDN5-211ENST00000550846 KIDINS220Q9ULH0 1771 aa13.03□□□□□ -0.32
PFDN5-211ENST00000550846 SAMD9LQ8IVG5 1584 aa13.03□□□□□ -0.32
PFDN5-211ENST00000550846 SPAG9O60271 1321 aaKnown RBP13.01□□□□□ -0.33
PFDN5-211ENST00000550846 AGLP35573 1532 aa13.01□□□□□ -0.33
PFDN5-211ENST00000550846 GPATCH8Q9UKJ3 1502 aaKnown RBP13.01□□□□□ -0.33
PFDN5-211ENST00000550846 CFDP1Q9UEE9 299 aaPredicted RBP12.99□□□□□ -0.33
PFDN5-211ENST00000550846 DMRT2Q9Y5R5 561 aa12.99□□□□□ -0.33
PFDN5-211ENST00000550846 SUPT6HQ7KZ85 1726 aaKnown RBP12.99□□□□□ -0.33
PFDN5-211ENST00000550846 CCNB3Q8WWL7 1395 aa12.98□□□□□ -0.33
PFDN5-211ENST00000550846 MTUS2Q5JR59 1369 aa12.97□□□□□ -0.33
PFDN5-211ENST00000550846 ATP7AQ04656 1500 aa12.97□□□□□ -0.33
PFDN5-211ENST00000550846 CNTLNQ9NXG0 1405 aa12.96□□□□□ -0.33
PFDN5-211ENST00000550846 ZNF644Q9H582 1327 aaPredicted RBP12.96□□□□□ -0.33
PFDN5-211ENST00000550846 GGT6Q6P531 493 aa12.95□□□□□ -0.34
PFDN5-211ENST00000550846 ZMYM3Q14202 1370 aa12.94□□□□□ -0.34
PFDN5-211ENST00000550846 CLTCQ00610 1675 aaKnown RBP12.94□□□□□ -0.34
PFDN5-211ENST00000550846 A2MP01023 1474 aa12.94□□□□□ -0.34
PFDN5-211ENST00000550846 CAMSAP1Q5T5Y3 1602 aa12.94□□□□□ -0.34
PFDN5-211ENST00000550846 PTPRTO14522 1441 aa12.94□□□□□ -0.34
PFDN5-211ENST00000550846 NCOA1Q15788 1441 aa12.94□□□□□ -0.34
PFDN5-211ENST00000550846 INO80Q9ULG1 1556 aaPredicted RBP12.94□□□□□ -0.34
PFDN5-211ENST00000550846 DISP3Q9P2K9 1392 aa12.94□□□□□ -0.34
PFDN5-211ENST00000550846 NCKAP5LQ9HCH0 1330 aa12.93□□□□□ -0.34
PFDN5-211ENST00000550846 SETD1BQ9UPS6 1966 aaKnown RBP12.93□□□□□ -0.34
PFDN5-211ENST00000550846 PLEKHH2Q8IVE3 1493 aa12.92□□□□□ -0.34
PFDN5-211ENST00000550846 TIAM1Q13009 1591 aa12.92□□□□□ -0.34
PFDN5-211ENST00000550846 PLXNC1O60486 1568 aa12.91□□□□□ -0.34
PFDN5-211ENST00000550846 KIAA1107Q9UPP5 1409 aa12.91□□□□□ -0.34
PFDN5-211ENST00000550846 MROH2AA6NES4 1674 aa12.9□□□□□ -0.34
PFDN5-211ENST00000550846 NPATQ14207 1427 aa12.9□□□□□ -0.34
PFDN5-211ENST00000550846 LTBP4Q8N2S1 1624 aa12.9□□□□□ -0.34
PFDN5-211ENST00000550846 ZNF335Q9H4Z2 1342 aaPredicted RBP12.89□□□□□ -0.35
PFDN5-211ENST00000550846 EHBP1L1Q8N3D4 1523 aa12.89□□□□□ -0.35
PFDN5-211ENST00000550846 MYO3AQ8NEV4 1616 aa12.89□□□□□ -0.35
PFDN5-211ENST00000550846 CEP162Q5TB80 1403 aa12.88□□□□□ -0.35
PFDN5-211ENST00000550846 ILDR2Q71H61 639 aa12.88□□□□□ -0.35
PFDN5-211ENST00000550846 PTPRKQ15262 1439 aa12.88□□□□□ -0.35
PFDN5-211ENST00000550846 CEP170BQ9Y4F5 1589 aaPredicted RBP12.86□□□□□ -0.35
PFDN5-211ENST00000550846 ADGBQ8N7X0 1667 aa12.86□□□□□ -0.35
PFDN5-211ENST00000550846 MBD5Q9P267 1494 aa12.85□□□□□ -0.35
PFDN5-211ENST00000550846 ZNF142P52746 1687 aaPredicted RBP12.84□□□□□ -0.35
PFDN5-211ENST00000550846 KIF3BO15066 747 aa12.84□□□□□ -0.35
PFDN5-211ENST00000550846 CAMSAP2Q08AD1 1489 aa12.84□□□□□ -0.35
PFDN5-211ENST00000550846 NCOA2Q15596 1464 aa12.84□□□□□ -0.35
PFDN5-211ENST00000550846 SPATA31D1Q6ZQQ2 1576 aa12.83□□□□□ -0.36
PFDN5-211ENST00000550846 FBXO31Q5XUX0 539 aaPredicted RBP12.83□□□□□ -0.36
PFDN5-211ENST00000550846 UBAP1LF5GYI3 381 aa12.82□□□□□ -0.36
PFDN5-211ENST00000550846 CCDC141Q6ZP82 1450 aa12.82□□□□□ -0.36
PFDN5-211ENST00000550846 DHX29Q7Z478 1369 aaKnown RBP12.81□□□□□ -0.36
PFDN5-211ENST00000550846 PLA2R1Q13018 1463 aa12.81□□□□□ -0.36
PFDN5-211ENST00000550846 TCOF1Q13428 1488 aaKnown RBP12.81□□□□□ -0.36
PFDN5-211ENST00000550846 PKD2Q13563 968 aa12.81□□□□□ -0.36
PFDN5-211ENST00000550846 PPP6R1Q9UPN7 881 aa12.81□□□□□ -0.36
PFDN5-211ENST00000550846 A2ML1A8K2U0 1454 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms