RNA–Protein interactions for RNA: ENST00000550600.5

KRT18-207, Transcript of keratin 18, humanhuman

TSL 1 (best) BASIC

Gene KRT18, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-207ENST00000550600 ZCCHC11Q5TAX3 1644 aaKnown RBP28.69■■■□□ 2.18
KRT18-207ENST00000550600 GCC2Q8IWJ2 1684 aa28.66■■■□□ 2.18
KRT18-207ENST00000550600 ABCC5O15440 1437 aa28.65■■■□□ 2.18
KRT18-207ENST00000550600 ZNF644Q9H582 1327 aaPredicted RBP28.62■■■□□ 2.17
KRT18-207ENST00000550600 CHIC2Q9UKJ5 165 aa28.6■■■□□ 2.17
KRT18-207ENST00000550600 PREX2Q70Z35 1606 aa28.6■■■□□ 2.17
KRT18-207ENST00000550600 ZNF777Q9ULD5 760 aaPredicted RBP28.59■■■□□ 2.17
KRT18-207ENST00000550600 RSPH4AQ5TD94 716 aa28.57■■■□□ 2.16
KRT18-207ENST00000550600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.56■■■□□ 2.166e-6■■■■□ 21.5
KRT18-207ENST00000550600 RRP7BPQ9NSQ0 103 aa28.56■■■□□ 2.16
KRT18-207ENST00000550600 CDC42BPBQ9Y5S2 1711 aa28.54■■■□□ 2.16
KRT18-207ENST00000550600 CROCC2H7BZ55 1655 aa28.53■■■□□ 2.16
KRT18-207ENST00000550600 ADGBQ8N7X0 1667 aa28.53■■■□□ 2.16
KRT18-207ENST00000550600 MAPKBP1O60336 1514 aa28.53■■■□□ 2.16
KRT18-207ENST00000550600 MYO5CQ9NQX4 1742 aa28.52■■■□□ 2.16
KRT18-207ENST00000550600 ADGRL2O95490 1459 aa28.52■■■□□ 2.16
KRT18-207ENST00000550600 SHANK2Q9UPX8 1470 aa28.52■■■□□ 2.16
KRT18-207ENST00000550600 ARHGEF5Q12774 1597 aa28.52■■■□□ 2.16
KRT18-207ENST00000550600 TTC37Q6PGP7 1564 aa28.51■■■□□ 2.15
KRT18-207ENST00000550600 PLEKHH2Q8IVE3 1493 aa28.5■■■□□ 2.15
KRT18-207ENST00000550600 KCNH8Q96L42 1107 aa28.48■■■□□ 2.15
KRT18-207ENST00000550600 ANKRD30AQ9BXX3 1397 aa28.48■■■□□ 2.15
KRT18-207ENST00000550600 TSPY4P0CV99 314 aa28.48■■■□□ 2.15
KRT18-207ENST00000550600 TSPY10P0CW01 314 aa28.48■■■□□ 2.15
KRT18-207ENST00000550600 WDR7Q9Y4E6 1490 aa28.47■■■□□ 2.15
KRT18-207ENST00000550600 NPM1P06748 294 aaKnown RBP eCLIP28.47■■■□□ 2.15
KRT18-207ENST00000550600 ARHGAP5Q13017 1502 aa28.47■■■□□ 2.15
KRT18-207ENST00000550600 NCOA1Q15788 1441 aa28.46■■■□□ 2.15
KRT18-207ENST00000550600 TIMELESSQ9UNS1 1208 aa28.46■■■□□ 2.15
KRT18-207ENST00000550600 PLCH2O75038 1416 aa28.46■■■□□ 2.15
KRT18-207ENST00000550600 SAMD9LQ8IVG5 1584 aa28.44■■■□□ 2.14
KRT18-207ENST00000550600 ARAP3Q8WWN8 1544 aa28.43■■■□□ 2.14
KRT18-207ENST00000550600 KIAA1107Q9UPP5 1409 aa28.43■■■□□ 2.14
KRT18-207ENST00000550600 MBD5Q9P267 1494 aa28.42■■■□□ 2.14
KRT18-207ENST00000550600 CCDC141Q6ZP82 1450 aa28.41■■■□□ 2.14
KRT18-207ENST00000550600 EFCAB2Q5VUJ9 269 aa28.41■■■□□ 2.14
KRT18-207ENST00000550600 C9orf84Q5VXU9 1444 aa28.4■■■□□ 2.14
KRT18-207ENST00000550600 HNRNPMP52272 730 aaKnown RBP eCLIP28.36■■■□□ 2.13
KRT18-207ENST00000550600 TRIM52Q96A61 297 aa28.36■■■□□ 2.13
KRT18-207ENST00000550600 ASXL2Q76L83 1435 aa28.35■■■□□ 2.13
KRT18-207ENST00000550600 KDM6BO15054 1643 aa28.35■■■□□ 2.13
KRT18-207ENST00000550600 ABCA9Q8IUA7 1624 aa28.33■■■□□ 2.13
KRT18-207ENST00000550600 MAST1Q9Y2H9 1570 aa28.32■■■□□ 2.12
KRT18-207ENST00000550600 SYCP2Q9BX26 1530 aa28.3■■■□□ 2.12
KRT18-207ENST00000550600 ANKRD50Q9ULJ7 1429 aa28.28■■■□□ 2.12
KRT18-207ENST00000550600 MPHOSPH9Q99550 1183 aa28.28■■■□□ 2.12
KRT18-207ENST00000550600 ZNF316A6NFI3 1004 aaPredicted RBP28.26■■■□□ 2.12
KRT18-207ENST00000550600 ABCC1P33527 1531 aa28.24■■■□□ 2.11
KRT18-207ENST00000550600 KIF15Q9NS87 1388 aa28.23■■■□□ 2.11
KRT18-207ENST00000550600 SIN3AQ96ST3 1273 aa28.23■■■□□ 2.11
KRT18-207ENST00000550600 NEUROD1Q13562 356 aa28.23■■■□□ 2.11
KRT18-207ENST00000550600 PLXNC1O60486 1568 aa28.19■■■□□ 2.1
KRT18-207ENST00000550600 FANCAO15360 1455 aa28.17■■■□□ 2.1
KRT18-207ENST00000550600 ARHGEF12Q9NZN5 1544 aa28.17■■■□□ 2.1
KRT18-207ENST00000550600 SLC4A1APQ9BWU0 796 aaKnown RBP28.16■■■□□ 2.1
KRT18-207ENST00000550600 DENND4BO75064 1496 aaPredicted RBP28.16■■■□□ 2.1
KRT18-207ENST00000550600 RIMBP3CA6NJZ7 1639 aa28.15■■■□□ 2.1
KRT18-207ENST00000550600 RIMBP3BA6NNM3 1639 aa28.15■■■□□ 2.1
KRT18-207ENST00000550600 RIMBP3Q9UFD9 1639 aa28.15■■■□□ 2.1
KRT18-207ENST00000550600 TONSLQ96HA7 1378 aa28.15■■■□□ 2.1
KRT18-207ENST00000550600 RTEL1-TNFRSF6BF6WH68 1400 aa28.13■■■□□ 2.09
KRT18-207ENST00000550600 KDM5DQ9BY66 1539 aa28.12■■■□□ 2.09
KRT18-207ENST00000550600 PZPP20742 1482 aa28.11■■■□□ 2.09
KRT18-207ENST00000550600 CFAP74Q9C0B2 1584 aa28.11■■■□□ 2.09
KRT18-207ENST00000550600 DUOX2Q9NRD8 1548 aa28.1■■■□□ 2.09
KRT18-207ENST00000550600 PPP1R15AO75807 674 aaPredicted RBP28.09■■■□□ 2.09
KRT18-207ENST00000550600 CYB5RLQ6IPT4 315 aa28.08■■■□□ 2.09
KRT18-207ENST00000550600 ANKRD30BQ9BXX2 1392 aa28.08■■■□□ 2.09
KRT18-207ENST00000550600 CD109Q6YHK3 1445 aa28.07■■■□□ 2.08
KRT18-207ENST00000550600 TRAPPC8Q9Y2L5 1435 aa28.07■■■□□ 2.08
KRT18-207ENST00000550600 NUP155O75694 1391 aa28.06■■■□□ 2.08
KRT18-207ENST00000550600 SPAG9O60271 1321 aaKnown RBP28.06■■■□□ 2.08
KRT18-207ENST00000550600 ADGRL1O94910 1474 aa28.06■■■□□ 2.08
KRT18-207ENST00000550600 ERBINQ96RT1 1412 aa28.05■■■□□ 2.08
KRT18-207ENST00000550600 SCAPERQ9BY12 1400 aa28.01■■■□□ 2.07
KRT18-207ENST00000550600 DIEXFQ68CQ4 756 aaKnown RBP28■■■□□ 2.07
KRT18-207ENST00000550600 UNC13BO14795 1591 aa27.98■■■□□ 2.07
KRT18-207ENST00000550600 RPRD2Q5VT52 1461 aaKnown RBP27.98■■■□□ 2.07
KRT18-207ENST00000550600 PKD2Q13563 968 aa27.97■■■□□ 2.07
KRT18-207ENST00000550600 AFAP1Q8N556 730 aa27.97■■■□□ 2.07
KRT18-207ENST00000550600 ZFYVE16Q7Z3T8 1539 aa27.96■■■□□ 2.07
KRT18-207ENST00000550600 GLI2P10070 1586 aa27.96■■■□□ 2.07
KRT18-207ENST00000550600 NEO1Q92859 1461 aa27.95■■■□□ 2.07
KRT18-207ENST00000550600 ZNF518AQ6AHZ1 1483 aa27.94■■■□□ 2.06
KRT18-207ENST00000550600 FOXD1Q16676 465 aa27.94■■■□□ 2.06
KRT18-207ENST00000550600 INO80Q9ULG1 1556 aaPredicted RBP27.93■■■□□ 2.06
KRT18-207ENST00000550600 ATP7AQ04656 1500 aa27.93■■■□□ 2.06
KRT18-207ENST00000550600 FAM135AQ9P2D6 1515 aa27.91■■■□□ 2.06
KRT18-207ENST00000550600 MAGI2Q86UL8 1455 aa27.89■■■□□ 2.06
KRT18-207ENST00000550600 IQGAP3Q86VI3 1631 aa27.88■■■□□ 2.05
KRT18-207ENST00000550600 MAP3K4Q9Y6R4 1608 aa27.87■■■□□ 2.05
KRT18-207ENST00000550600 POGZQ7Z3K3 1410 aa27.84■■■□□ 2.05
KRT18-207ENST00000550600 MYT1LQ9UL68 1186 aa27.83■■■□□ 2.05
KRT18-207ENST00000550600 DHX29Q7Z478 1369 aaKnown RBP27.82■■■□□ 2.04
KRT18-207ENST00000550600 KDM5CP41229 1560 aa27.82■■■□□ 2.04
KRT18-207ENST00000550600 L3MBTL2Q969R5 705 aa27.81■■■□□ 2.04
KRT18-207ENST00000550600 EIF2AK4Q9P2K8 1649 aaKnown RBP27.81■■■□□ 2.04
KRT18-207ENST00000550600 MLH3Q9UHC1 1453 aa27.81■■■□□ 2.04
KRT18-207ENST00000550600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.79■■■□□ 2.041e-7■■□□□ 12.3
KRT18-207ENST00000550600 KIDINS220Q9ULH0 1771 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms