RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 POGZQ7Z3K3 1410 aa17.97■□□□□ 0.47
PFDN5-210ENST00000550513 ARID4BQ4LE39 1312 aaPredicted RBP17.97■□□□□ 0.47
PFDN5-210ENST00000550513 MAGI2Q86UL8 1455 aa17.96■□□□□ 0.47
PFDN5-210ENST00000550513 PREX2Q70Z35 1606 aa17.95■□□□□ 0.46
PFDN5-210ENST00000550513 YEATS2Q9ULM3 1422 aa17.95■□□□□ 0.46
PFDN5-210ENST00000550513 ILDR1Q86SU0 546 aaPredicted RBP17.94■□□□□ 0.46
PFDN5-210ENST00000550513 ARHGAP5Q13017 1502 aa17.93■□□□□ 0.46
PFDN5-210ENST00000550513 ATP1B4Q9UN42 357 aaPredicted RBP17.93■□□□□ 0.46
PFDN5-210ENST00000550513 CLIP1P30622 1438 aa17.92■□□□□ 0.46
PFDN5-210ENST00000550513 TROQ12816 1431 aaPredicted RBP17.92■□□□□ 0.46
PFDN5-210ENST00000550513 SCAPERQ9BY12 1400 aa17.92■□□□□ 0.46
PFDN5-210ENST00000550513 LMTK3Q96Q04 1460 aa17.92■□□□□ 0.46
PFDN5-210ENST00000550513 CDC42BPAQ5VT25 1732 aa17.92■□□□□ 0.46
PFDN5-210ENST00000550513 KDM5CP41229 1560 aa17.91■□□□□ 0.46
PFDN5-210ENST00000550513 ITSN2Q9NZM3 1697 aa17.91■□□□□ 0.46
PFDN5-210ENST00000550513 CCDC18Q5T9S5 1454 aa17.9■□□□□ 0.46
PFDN5-210ENST00000550513 CDK11AQ9UQ88 783 aaPredicted RBP17.89■□□□□ 0.45
PFDN5-210ENST00000550513 ZNF518AQ6AHZ1 1483 aa17.88■□□□□ 0.45
PFDN5-210ENST00000550513 PREX1Q8TCU6 1659 aa17.87■□□□□ 0.45
PFDN5-210ENST00000550513 C9orf84Q5VXU9 1444 aa17.87■□□□□ 0.45
PFDN5-210ENST00000550513 ABCA6Q8N139 1617 aa17.87■□□□□ 0.45
PFDN5-210ENST00000550513 ABCC1P33527 1531 aa17.86■□□□□ 0.45
PFDN5-210ENST00000550513 DIP2CQ9Y2E4 1556 aa17.86■□□□□ 0.45
PFDN5-210ENST00000550513 CASKIN1Q8WXD9 1431 aa17.85■□□□□ 0.45
PFDN5-210ENST00000550513 ARHGEF12Q9NZN5 1544 aa17.85■□□□□ 0.45
PFDN5-210ENST00000550513 ATP10AO60312 1499 aa17.84■□□□□ 0.45
PFDN5-210ENST00000550513 FYCO1Q9BQS8 1478 aa17.84■□□□□ 0.45
PFDN5-210ENST00000550513 REREQ9P2R6 1566 aa17.83■□□□□ 0.45
PFDN5-210ENST00000550513 EFCAB2Q5VUJ9 269 aa17.83■□□□□ 0.44
PFDN5-210ENST00000550513 KIDINS220Q9ULH0 1771 aa17.79■□□□□ 0.44
PFDN5-210ENST00000550513 C3P01024 1663 aa17.78■□□□□ 0.44
PFDN5-210ENST00000550513 MLECQ14165 292 aa17.77■□□□□ 0.44
PFDN5-210ENST00000550513 SAMD9LQ8IVG5 1584 aa17.76■□□□□ 0.43
PFDN5-210ENST00000550513 PLPPR3Q6T4P5 718 aa17.76■□□□□ 0.43
PFDN5-210ENST00000550513 MLH3Q9UHC1 1453 aa17.75■□□□□ 0.43
PFDN5-210ENST00000550513 SYCP2Q9BX26 1530 aa17.72■□□□□ 0.43
PFDN5-210ENST00000550513 SETD1BQ9UPS6 1966 aaKnown RBP17.71■□□□□ 0.43
PFDN5-210ENST00000550513 AFAP1Q8N556 730 aa17.71■□□□□ 0.43
PFDN5-210ENST00000550513 AGLP35573 1532 aa17.71■□□□□ 0.43
PFDN5-210ENST00000550513 TRAPPC8Q9Y2L5 1435 aa17.71■□□□□ 0.43
PFDN5-210ENST00000550513 SUPT6HQ7KZ85 1726 aaKnown RBP17.7■□□□□ 0.42
PFDN5-210ENST00000550513 MYT1LQ9UL68 1186 aa17.7■□□□□ 0.42
PFDN5-210ENST00000550513 STRCQ7RTU9 1775 aa17.7■□□□□ 0.42
PFDN5-210ENST00000550513 MROH2AA6NES4 1674 aa17.7■□□□□ 0.42
PFDN5-210ENST00000550513 HSPA2P54652 639 aa17.69■□□□□ 0.42
PFDN5-210ENST00000550513 INO80Q9ULG1 1556 aaPredicted RBP17.69■□□□□ 0.42
PFDN5-210ENST00000550513 FBXO41Q8TF61 875 aa17.68■□□□□ 0.42
PFDN5-210ENST00000550513 ATP7AQ04656 1500 aa17.66■□□□□ 0.42
PFDN5-210ENST00000550513 ADGBQ8N7X0 1667 aa17.65■□□□□ 0.42
PFDN5-210ENST00000550513 EHBP1L1Q8N3D4 1523 aa17.65■□□□□ 0.42
PFDN5-210ENST00000550513 GPATCH8Q9UKJ3 1502 aaKnown RBP17.65■□□□□ 0.42
PFDN5-210ENST00000550513 TIAM1Q13009 1591 aa17.64■□□□□ 0.41
PFDN5-210ENST00000550513 UHRF1BP1Q6BDS2 1440 aa17.64■□□□□ 0.41
PFDN5-210ENST00000550513 PLXNC1O60486 1568 aa17.63■□□□□ 0.41
PFDN5-210ENST00000550513 CLTCQ00610 1675 aaKnown RBP17.63■□□□□ 0.41
PFDN5-210ENST00000550513 PLEKHH2Q8IVE3 1493 aa17.62■□□□□ 0.41
PFDN5-210ENST00000550513 CEBPAP49715 358 aaPredicted RBP17.6■□□□□ 0.41
PFDN5-210ENST00000550513 CNTLNQ9NXG0 1405 aa17.59■□□□□ 0.41
PFDN5-210ENST00000550513 MTUS2Q5JR59 1369 aa17.58■□□□□ 0.4
PFDN5-210ENST00000550513 ZNF777Q9ULD5 760 aaPredicted RBP17.58■□□□□ 0.4
PFDN5-210ENST00000550513 ZNF142P52746 1687 aaPredicted RBP17.58■□□□□ 0.4
PFDN5-210ENST00000550513 CCNB3Q8WWL7 1395 aa17.57■□□□□ 0.4
PFDN5-210ENST00000550513 MYO3AQ8NEV4 1616 aa17.57■□□□□ 0.4
PFDN5-210ENST00000550513 KIAA1107Q9UPP5 1409 aa17.56■□□□□ 0.4
PFDN5-210ENST00000550513 ESF1Q9H501 851 aaKnown RBP17.56■□□□□ 0.4
PFDN5-210ENST00000550513 CEP162Q5TB80 1403 aa17.55■□□□□ 0.4
PFDN5-210ENST00000550513 SPAG9O60271 1321 aaKnown RBP17.54■□□□□ 0.4
PFDN5-210ENST00000550513 A2MP01023 1474 aa17.53■□□□□ 0.4
PFDN5-210ENST00000550513 CFDP1Q9UEE9 299 aaPredicted RBP17.52■□□□□ 0.4
PFDN5-210ENST00000550513 HNRNPMP52272 730 aaKnown RBP eCLIP17.51■□□□□ 0.39
PFDN5-210ENST00000550513 NPATQ14207 1427 aa17.5■□□□□ 0.39
PFDN5-210ENST00000550513 CERKQ8TCT0 537 aa17.49■□□□□ 0.39
PFDN5-210ENST00000550513 CAMSAP1Q5T5Y3 1602 aa17.49■□□□□ 0.39
PFDN5-210ENST00000550513 CEP170BQ9Y4F5 1589 aaPredicted RBP17.48■□□□□ 0.39
PFDN5-210ENST00000550513 PTPRTO14522 1441 aa17.47■□□□□ 0.39
PFDN5-210ENST00000550513 NCOA1Q15788 1441 aa17.47■□□□□ 0.39
PFDN5-210ENST00000550513 CAMSAP2Q08AD1 1489 aa17.46■□□□□ 0.39
PFDN5-210ENST00000550513 MBD5Q9P267 1494 aa17.46■□□□□ 0.39
PFDN5-210ENST00000550513 DMRT2Q9Y5R5 561 aa17.46■□□□□ 0.39
PFDN5-210ENST00000550513 NCOA2Q15596 1464 aa17.45■□□□□ 0.38
PFDN5-210ENST00000550513 POLR1AO95602 1720 aaPredicted RBP17.45■□□□□ 0.38
PFDN5-210ENST00000550513 CCDC141Q6ZP82 1450 aa17.44■□□□□ 0.38
PFDN5-210ENST00000550513 ZMYM3Q14202 1370 aa17.43■□□□□ 0.38
PFDN5-210ENST00000550513 ARHGEF5Q12774 1597 aa17.43■□□□□ 0.38
PFDN5-210ENST00000550513 RTEL1-TNFRSF6BF6WH68 1400 aa17.42■□□□□ 0.38
PFDN5-210ENST00000550513 LTBP4Q8N2S1 1624 aa17.42■□□□□ 0.38
PFDN5-210ENST00000550513 ZNF644Q9H582 1327 aaPredicted RBP17.42■□□□□ 0.38
PFDN5-210ENST00000550513 FAM135AQ9P2D6 1515 aa17.42■□□□□ 0.38
PFDN5-210ENST00000550513 KDM5DQ9BY66 1539 aa17.4■□□□□ 0.38
PFDN5-210ENST00000550513 PTPRKQ15262 1439 aa17.39■□□□□ 0.38
PFDN5-210ENST00000550513 PLA2R1Q13018 1463 aa17.38■□□□□ 0.37
PFDN5-210ENST00000550513 ZC3H13Q5T200 1668 aaKnown RBP17.38■□□□□ 0.37
PFDN5-210ENST00000550513 VPS8Q8N3P4 1428 aa17.38■□□□□ 0.37
PFDN5-210ENST00000550513 DNMT1P26358 1616 aaKnown RBP17.37■□□□□ 0.37
PFDN5-210ENST00000550513 GGT6Q6P531 493 aa17.37■□□□□ 0.37
PFDN5-210ENST00000550513 IQSEC2Q5JU85 1478 aa17.37■□□□□ 0.37
PFDN5-210ENST00000550513 MAST1Q9Y2H9 1570 aa17.36■□□□□ 0.37
PFDN5-210ENST00000550513 RNF17Q9BXT8 1623 aaKnown RBP17.36■□□□□ 0.37
PFDN5-210ENST00000550513 LRRC9Q6ZRR7 1453 aa17.36■□□□□ 0.37
PFDN5-210ENST00000550513 EIF2AK4Q9P2K8 1649 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms