RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 KCNH8Q96L42 1107 aa30.3■■■□□ 2.44
PRDM4-205ENST00000550376 ABCC10Q5T3U5 1492 aa30.27■■■□□ 2.44
PRDM4-205ENST00000550376 MIER1Q8N108 512 aa30.27■■■□□ 2.44
PRDM4-205ENST00000550376 DNMT1P26358 1616 aaKnown RBP30.27■■■□□ 2.44
PRDM4-205ENST00000550376 ADCY10Q96PN6 1610 aa30.27■■■□□ 2.44
PRDM4-205ENST00000550376 HNRNPMP52272 730 aaKnown RBP eCLIP30.25■■■□□ 2.43
PRDM4-205ENST00000550376 MPHOSPH9Q99550 1183 aa30.25■■■□□ 2.43
PRDM4-205ENST00000550376 CLASP1Q7Z460 1538 aa30.25■■■□□ 2.43
PRDM4-205ENST00000550376 GCC2Q8IWJ2 1684 aa30.22■■■□□ 2.43
PRDM4-205ENST00000550376 AKNAQ7Z591 1439 aa30.22■■■□□ 2.43
PRDM4-205ENST00000550376 DENND4BO75064 1496 aaPredicted RBP30.21■■■□□ 2.43
PRDM4-205ENST00000550376 PPP1R15AO75807 674 aaPredicted RBP30.21■■■□□ 2.43
PRDM4-205ENST00000550376 ITSN2Q9NZM3 1697 aa30.2■■■□□ 2.43
PRDM4-205ENST00000550376 HIRIP3Q9BW71 556 aaPredicted RBP30.2■■■□□ 2.43
PRDM4-205ENST00000550376 ROCK1Q13464 1354 aa30.2■■■□□ 2.43
PRDM4-205ENST00000550376 CDC42BPAQ5VT25 1732 aa30.19■■■□□ 2.42
PRDM4-205ENST00000550376 TONSLQ96HA7 1378 aa30.18■■■□□ 2.42
PRDM4-205ENST00000550376 NCOA1Q15788 1441 aa30.15■■■□□ 2.42
PRDM4-205ENST00000550376 ABCC2Q92887 1545 aa30.14■■■□□ 2.42
PRDM4-205ENST00000550376 TIMELESSQ9UNS1 1208 aa30.12■■■□□ 2.41
PRDM4-205ENST00000550376 SLC4A1APQ9BWU0 796 aaKnown RBP30.11■■■□□ 2.41
PRDM4-205ENST00000550376 TSPY4P0CV99 314 aa30.08■■■□□ 2.41
PRDM4-205ENST00000550376 TSPY10P0CW01 314 aa30.08■■■□□ 2.41
PRDM4-205ENST00000550376 ANKRD30AQ9BXX3 1397 aa30.05■■■□□ 2.4
PRDM4-205ENST00000550376 YTHDC1Q96MU7 727 aaKnown RBP30.05■■■□□ 2.4
PRDM4-205ENST00000550376 TTC37Q6PGP7 1564 aa30.03■■■□□ 2.4
PRDM4-205ENST00000550376 C9orf84Q5VXU9 1444 aa30.02■■■□□ 2.4
PRDM4-205ENST00000550376 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.02■■■□□ 2.4
PRDM4-205ENST00000550376 CDC42BPBQ9Y5S2 1711 aa30■■■□□ 2.39
PRDM4-205ENST00000550376 OSCARQ8IYS5 282 aa30■■■□□ 2.39
PRDM4-205ENST00000550376 MBD5Q9P267 1494 aa29.99■■■□□ 2.39
PRDM4-205ENST00000550376 ANKRD50Q9ULJ7 1429 aa29.97■■■□□ 2.39
PRDM4-205ENST00000550376 SAMD9LQ8IVG5 1584 aa29.97■■■□□ 2.39
PRDM4-205ENST00000550376 ARHGAP5Q13017 1502 aa29.97■■■□□ 2.39
PRDM4-205ENST00000550376 ZCCHC11Q5TAX3 1644 aaKnown RBP29.96■■■□□ 2.39
PRDM4-205ENST00000550376 ADGRL2O95490 1459 aa29.96■■■□□ 2.39
PRDM4-205ENST00000550376 CROCC2H7BZ55 1655 aa29.96■■■□□ 2.39
PRDM4-205ENST00000550376 L3MBTL2Q969R5 705 aa29.94■■■□□ 2.38
PRDM4-205ENST00000550376 ANKRD30BQ9BXX2 1392 aa29.93■■■□□ 2.38
PRDM4-205ENST00000550376 KDM5BQ9UGL1 1544 aa29.93■■■□□ 2.38
PRDM4-205ENST00000550376 ADGBQ8N7X0 1667 aa29.93■■■□□ 2.38
PRDM4-205ENST00000550376 PREX2Q70Z35 1606 aa29.92■■■□□ 2.38
PRDM4-205ENST00000550376 PZPP20742 1482 aa29.92■■■□□ 2.38
PRDM4-205ENST00000550376 PKD2Q13563 968 aa29.92■■■□□ 2.38
PRDM4-205ENST00000550376 KIF15Q9NS87 1388 aa29.91■■■□□ 2.38
PRDM4-205ENST00000550376 UHRF1BP1LA0JNW5 1464 aa29.91■■■□□ 2.38
PRDM4-205ENST00000550376 DDX10Q13206 875 aaKnown RBP29.9■■■□□ 2.38
PRDM4-205ENST00000550376 SYCP2Q9BX26 1530 aa29.89■■■□□ 2.38
PRDM4-205ENST00000550376 NUP155O75694 1391 aa29.88■■■□□ 2.37
PRDM4-205ENST00000550376 CCDC141Q6ZP82 1450 aa29.86■■■□□ 2.37
PRDM4-205ENST00000550376 SHANK2Q9UPX8 1470 aa29.85■■■□□ 2.37
PRDM4-205ENST00000550376 ARHGEF12Q9NZN5 1544 aa29.81■■■□□ 2.36
PRDM4-205ENST00000550376 ARHGEF5Q12774 1597 aa29.81■■■□□ 2.36
PRDM4-205ENST00000550376 EFCAB2Q5VUJ9 269 aa29.81■■■□□ 2.36
PRDM4-205ENST00000550376 PLCH2O75038 1416 aa29.8■■■□□ 2.36
PRDM4-205ENST00000550376 RSPH4AQ5TD94 716 aa29.8■■■□□ 2.36
PRDM4-205ENST00000550376 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.79■■■□□ 2.36
PRDM4-205ENST00000550376 MYO5CQ9NQX4 1742 aa29.78■■■□□ 2.36
PRDM4-205ENST00000550376 ACIN1Q9UKV3 1341 aaKnown RBP29.77■■■□□ 2.36
PRDM4-205ENST00000550376 NBPF8Q3BBV2 869 aa29.76■■■□□ 2.36
PRDM4-205ENST00000550376 RPRD2Q5VT52 1461 aaKnown RBP29.76■■■□□ 2.35
PRDM4-205ENST00000550376 AFAP1Q8N556 730 aa29.75■■■□□ 2.35
PRDM4-205ENST00000550376 KIAA1107Q9UPP5 1409 aa29.74■■■□□ 2.35
PRDM4-205ENST00000550376 TRAPPC8Q9Y2L5 1435 aa29.7■■■□□ 2.35
PRDM4-205ENST00000550376 WDR7Q9Y4E6 1490 aa29.7■■■□□ 2.34
PRDM4-205ENST00000550376 ZNF326Q5BKZ1 582 aaKnown RBP29.69■■■□□ 2.34
PRDM4-205ENST00000550376 HSPA5P11021 654 aaKnown RBP29.69■■■□□ 2.34
PRDM4-205ENST00000550376 SCAF1Q9H7N4 1312 aaKnown RBP29.69■■■□□ 2.34
PRDM4-205ENST00000550376 CENPBP07199 599 aaPredicted RBP29.68■■■□□ 2.34
PRDM4-205ENST00000550376 ASXL2Q76L83 1435 aa29.67■■■□□ 2.34
PRDM4-205ENST00000550376 NPM1P06748 294 aaKnown RBP eCLIP29.65■■■□□ 2.34
PRDM4-205ENST00000550376 TEX14Q8IWB6 1497 aa29.64■■■□□ 2.34
PRDM4-205ENST00000550376 PLEKHH2Q8IVE3 1493 aa29.64■■■□□ 2.34
PRDM4-205ENST00000550376 MYT1LQ9UL68 1186 aa29.59■■■□□ 2.33
PRDM4-205ENST00000550376 SPAG9O60271 1321 aaKnown RBP29.58■■■□□ 2.33
PRDM4-205ENST00000550376 EIF4G2P78344 907 aaKnown RBP eCLIP29.58■■■□□ 2.33
PRDM4-205ENST00000550376 ABCC1P33527 1531 aa29.57■■■□□ 2.32
PRDM4-205ENST00000550376 KDM2AQ9Y2K7 1162 aa29.57■■■□□ 2.32
PRDM4-205ENST00000550376 FANCAO15360 1455 aa29.55■■■□□ 2.32
PRDM4-205ENST00000550376 FAM135AQ9P2D6 1515 aa29.54■■■□□ 2.32
PRDM4-205ENST00000550376 MAST1Q9Y2H9 1570 aa29.54■■■□□ 2.32
PRDM4-205ENST00000550376 C11orf95C9JLR9 678 aaPredicted RBP29.52■■■□□ 2.32
PRDM4-205ENST00000550376 KDM5DQ9BY66 1539 aa29.51■■■□□ 2.31
PRDM4-205ENST00000550376 WASHC2AQ641Q2 1341 aa29.51■■■□□ 2.31
PRDM4-205ENST00000550376 CYB5RLQ6IPT4 315 aa29.5■■■□□ 2.31
PRDM4-205ENST00000550376 RGL3Q3MIN7 710 aa29.48■■■□□ 2.31
PRDM4-205ENST00000550376 SCAPERQ9BY12 1400 aa29.47■■■□□ 2.31
PRDM4-205ENST00000550376 DCAF11Q8TEB1 546 aa29.47■■■□□ 2.31
PRDM4-205ENST00000550376 PLXNC1O60486 1568 aa29.45■■■□□ 2.3
PRDM4-205ENST00000550376 DUOX2Q9NRD8 1548 aa29.45■■■□□ 2.3
PRDM4-205ENST00000550376 ABCA9Q8IUA7 1624 aa29.44■■■□□ 2.3
PRDM4-205ENST00000550376 ADGRL1O94910 1474 aa29.43■■■□□ 2.3
PRDM4-205ENST00000550376 GTF3C3Q9Y5Q9 886 aa29.43■■■□□ 2.3
PRDM4-205ENST00000550376 ARAP3Q8WWN8 1544 aa29.39■■■□□ 2.3
PRDM4-205ENST00000550376 PLA2R1Q13018 1463 aa29.39■■■□□ 2.29
PRDM4-205ENST00000550376 ANP32CO43423 234 aa29.39■■■□□ 2.29
PRDM4-205ENST00000550376 ERBINQ96RT1 1412 aa29.38■■■□□ 2.29
PRDM4-205ENST00000550376 UNC13BO14795 1591 aa29.37■■■□□ 2.29
PRDM4-205ENST00000550376 CD109Q6YHK3 1445 aa29.36■■■□□ 2.29
PRDM4-205ENST00000550376 ZFYVE16Q7Z3T8 1539 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms