RNA–Protein interactions for RNA: ENST00000549237.5

USP15-212, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 791 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-212ENST00000549237 CABP2Q9NPB3 220 aa11.7□□□□□ -0.54
USP15-212ENST00000549237 THOC2Q8NI27 1593 aaKnown RBP11.7□□□□□ -0.54
USP15-212ENST00000549237 G3V3G9 751 aa11.69□□□□□ -0.54
USP15-212ENST00000549237 EMP3P54852 163 aa11.67□□□□□ -0.54
USP15-212ENST00000549237 ILDR1Q86SU0 546 aaPredicted RBP11.67□□□□□ -0.54
USP15-212ENST00000549237 CCDC88BA6NC98 1476 aa11.67□□□□□ -0.54
USP15-212ENST00000549237 CFTRP13569 1480 aa11.65□□□□□ -0.54
USP15-212ENST00000549237 CUX2O14529 1486 aa11.64□□□□□ -0.55
USP15-212ENST00000549237 PDS5BQ9NTI5 1447 aa11.64□□□□□ -0.55
USP15-212ENST00000549237 DPY19L2Q6NUT2 758 aa11.63□□□□□ -0.55
USP15-212ENST00000549237 BOLA1Q9Y3E2 137 aa11.63□□□□□ -0.55
USP15-212ENST00000549237 PRDM2Q13029 1718 aa11.61□□□□□ -0.55
USP15-212ENST00000549237 SPNS2Q8IVW8 549 aa11.61□□□□□ -0.55
USP15-212ENST00000549237 TRIM41Q8WV44 630 aa11.61□□□□□ -0.55
USP15-212ENST00000549237 MMRN1Q13201 1228 aa11.6□□□□□ -0.55
USP15-212ENST00000549237 FANCD2Q9BXW9 1451 aa11.58□□□□□ -0.56
USP15-212ENST00000549237 MRC2Q9UBG0 1479 aa11.57□□□□□ -0.56
USP15-212ENST00000549237 HS3ST6Q96QI5 342 aa11.56□□□□□ -0.56
USP15-212ENST00000549237 CEP164Q9UPV0 1460 aa11.56□□□□□ -0.56
USP15-212ENST00000549237 WDR62O43379 1518 aa11.55□□□□□ -0.56
USP15-212ENST00000549237 FAM205CA6NFA0 338 aa11.55□□□□□ -0.56
USP15-212ENST00000549237 URB2Q14146 1524 aaKnown RBP11.52□□□□□ -0.57
USP15-212ENST00000549237 SUPT5HO00267 1087 aaKnown RBP11.52□□□□□ -0.57
USP15-212ENST00000549237 EFCAB3Q8N7B9 438 aa11.52□□□□□ -0.57
USP15-212ENST00000549237 ZNF710Q8N1W2 664 aa11.51□□□□□ -0.57
USP15-212ENST00000549237 HOXB3P14651 431 aaPredicted RBP11.5□□□□□ -0.57
USP15-212ENST00000549237 DOK7Q18PE1 504 aa11.49□□□□□ -0.57
USP15-212ENST00000549237 POTEB3A0JP26 581 aa11.48□□□□□ -0.57
USP15-212ENST00000549237 POTEBQ6S5H4 581 aa11.48□□□□□ -0.57
USP15-212ENST00000549237 KRTAP3-3Q9BYR6 98 aa11.48□□□□□ -0.57
USP15-212ENST00000549237 KRTAP3-2Q9BYR7 98 aa11.48□□□□□ -0.57
USP15-212ENST00000549237 RIOK3O14730 519 aaKnown RBP11.45□□□□□ -0.58
USP15-212ENST00000549237 RIMBP2O15034 1052 aa11.45□□□□□ -0.58
USP15-212ENST00000549237 HOXB1P14653 301 aaPredicted RBP11.44□□□□□ -0.58
USP15-212ENST00000549237 MICALL2Q8IY33 904 aa11.42□□□□□ -0.58
USP15-212ENST00000549237 ERBB3P21860 1342 aa11.41□□□□□ -0.58
USP15-212ENST00000549237 TOPBP1Q92547 1522 aa11.41□□□□□ -0.58
USP15-212ENST00000549237 SOX12O15370 315 aa11.41□□□□□ -0.58
USP15-212ENST00000549237 VGFO15240 615 aaPredicted RBP11.4□□□□□ -0.58
USP15-212ENST00000549237 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.39□□□□□ -0.59
USP15-212ENST00000549237 DNMBPQ6XZF7 1577 aa11.39□□□□□ -0.59
USP15-212ENST00000549237 RNF25Q96BH1 459 aaPredicted RBP11.39□□□□□ -0.59
USP15-212ENST00000549237 ZFP91Q96JP5 570 aaPredicted RBP11.39□□□□□ -0.59
USP15-212ENST00000549237 DNAJC5Q9H3Z4 198 aa11.39□□□□□ -0.59
USP15-212ENST00000549237 ZNF608Q9ULD9 1512 aaPredicted RBP11.35□□□□□ -0.59
USP15-212ENST00000549237 ABCC8Q09428 1581 aa11.34□□□□□ -0.59
USP15-212ENST00000549237 TMEM92Q6UXU6 159 aa11.34□□□□□ -0.59
USP15-212ENST00000549237 MS4A4AQ96JQ5 239 aa11.34□□□□□ -0.59
USP15-212ENST00000549237 ZSWIM6Q9HCJ5 1215 aa11.34□□□□□ -0.59
USP15-212ENST00000549237 PHF8Q9UPP1 1060 aa11.34□□□□□ -0.59
USP15-212ENST00000549237 VARS2Q5ST30 1063 aaKnown RBP11.33□□□□□ -0.6
USP15-212ENST00000549237 TARBP1Q13395 1621 aaKnown RBP11.33□□□□□ -0.6
USP15-212ENST00000549237 CUX1P39880 1505 aa11.33□□□□□ -0.6
USP15-212ENST00000549237 POLA1P09884 1462 aaPredicted RBP11.32□□□□□ -0.6
USP15-212ENST00000549237 IFT140Q96RY7 1462 aa11.32□□□□□ -0.6
USP15-212ENST00000549237 TAOK2Q9UL54 1235 aa11.31□□□□□ -0.6
USP15-212ENST00000549237 RAD54L2Q9Y4B4 1467 aa11.29□□□□□ -0.6
USP15-212ENST00000549237 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
USP15-212ENST00000549237 NLRP6P59044 892 aa11.28□□□□□ -0.6
USP15-212ENST00000549237 FGD5Q6ZNL6 1462 aa11.27□□□□□ -0.6
USP15-212ENST00000549237 BCL11BQ9C0K0 894 aaPredicted RBP11.26□□□□□ -0.61
USP15-212ENST00000549237 AQRO60306 1485 aaKnown RBP eCLIP11.25□□□□□ -0.612e-8■■■■□ 20.3
USP15-212ENST00000549237 WDR97A6NE52 1622 aa11.24□□□□□ -0.61
USP15-212ENST00000549237 GPR153Q6NV75 609 aa11.24□□□□□ -0.61
USP15-212ENST00000549237 RNF166Q96A37 237 aaPredicted RBP11.24□□□□□ -0.61
USP15-212ENST00000549237 SOGA1O94964 1423 aa11.24□□□□□ -0.61
USP15-212ENST00000549237 ZNF687Q8N1G0 1237 aa11.23□□□□□ -0.61
USP15-212ENST00000549237 STK24Q9Y6E0 443 aa11.23□□□□□ -0.61
USP15-212ENST00000549237 SYNJ1O43426 1573 aa11.23□□□□□ -0.61
USP15-212ENST00000549237 BIVM-ERCC5R4GMW8 1640 aa11.22□□□□□ -0.61
USP15-212ENST00000549237 TDRD9Q8NDG6 1382 aaKnown RBP11.21□□□□□ -0.61
USP15-212ENST00000549237 FBXO22Q8NEZ5 403 aa11.21□□□□□ -0.61
USP15-212ENST00000549237 TOP2BQ02880 1626 aa11.2□□□□□ -0.62
USP15-212ENST00000549237 ARSIQ5FYB1 569 aa11.19□□□□□ -0.62
USP15-212ENST00000549237 MYT1LQ9UL68 1186 aa11.19□□□□□ -0.62
USP15-212ENST00000549237 WRNQ14191 1432 aaPredicted RBP eCLIP11.18□□□□□ -0.62
USP15-212ENST00000549237 CHD1O14646 1710 aa11.18□□□□□ -0.62
USP15-212ENST00000549237 STK25O00506 426 aa11.18□□□□□ -0.62
USP15-212ENST00000549237 MFRPQ9BY79 579 aa11.16□□□□□ -0.62
USP15-212ENST00000549237 ABCA10Q8WWZ4 1543 aa11.15□□□□□ -0.62
USP15-212ENST00000549237 PBRM1Q86U86 1689 aa11.15□□□□□ -0.62
USP15-212ENST00000549237 PTGER2P43116 358 aa11.15□□□□□ -0.62
USP15-212ENST00000549237 ABCA5Q8WWZ7 1642 aa11.15□□□□□ -0.62
USP15-212ENST00000549237 ECM2O94769 699 aaPredicted RBP11.14□□□□□ -0.63
USP15-212ENST00000549237 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
USP15-212ENST00000549237 KHSRPQ92945 711 aaKnown RBP eCLIP11.13□□□□□ -0.634e-7■■■□□ 18.6
USP15-212ENST00000549237 SNAPC4Q5SXM2 1469 aa11.12□□□□□ -0.63
USP15-212ENST00000549237 GAPVD1Q14C86 1478 aa11.11□□□□□ -0.63
USP15-212ENST00000549237 C2orf72A6NCS6 295 aa11.1□□□□□ -0.63
USP15-212ENST00000549237 ANKRD13DQ6ZTN6 518 aa11.1□□□□□ -0.63
USP15-212ENST00000549237 GRIN2BQ13224 1484 aa11.1□□□□□ -0.63
USP15-212ENST00000549237 KIF3CO14782 793 aa11.08□□□□□ -0.64
USP15-212ENST00000549237 MAGI1Q96QZ7 1491 aaPredicted RBP11.07□□□□□ -0.64
USP15-212ENST00000549237 LSM11P83369 360 aaKnown RBP eCLIP11.06□□□□□ -0.64
USP15-212ENST00000549237 TMC2Q8TDI7 906 aa11.06□□□□□ -0.64
USP15-212ENST00000549237 RIMBP3CA6NJZ7 1639 aa11.06□□□□□ -0.64
USP15-212ENST00000549237 RIMBP3BA6NNM3 1639 aa11.06□□□□□ -0.64
USP15-212ENST00000549237 RIMBP3Q9UFD9 1639 aa11.06□□□□□ -0.64
USP15-212ENST00000549237 NUDT7P0C024 238 aa11.05□□□□□ -0.64
USP15-212ENST00000549237 SYNJ2O15056 1496 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms