RNA–Protein interactions for RNA: ENST00000549101.1

USP15-211, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-211ENST00000549101 CADPS2Q86UW7 1296 aa14.78□□□□□ -0.04
USP15-211ENST00000549101 TSHZ2Q9NRE2 1034 aa14.76□□□□□ -0.05
USP15-211ENST00000549101 C2orf72A6NCS6 295 aa14.73□□□□□ -0.05
USP15-211ENST00000549101 TMC2Q8TDI7 906 aa14.73□□□□□ -0.05
USP15-211ENST00000549101 KIF3CO14782 793 aa14.72□□□□□ -0.05
USP15-211ENST00000549101 GPHNQ9NQX3 736 aaPredicted RBP14.71□□□□□ -0.05
USP15-211ENST00000549101 NCKAP5LQ9HCH0 1330 aa14.7□□□□□ -0.06
USP15-211ENST00000549101 CRISPLD2Q9H0B8 497 aa14.7□□□□□ -0.06
USP15-211ENST00000549101 PDE4AP27815 886 aa14.69□□□□□ -0.06
USP15-211ENST00000549101 HAP1P54257 671 aaPredicted RBP14.67□□□□□ -0.06
USP15-211ENST00000549101 LARP6Q9BRS8 491 aaKnown RBP14.65□□□□□ -0.06
USP15-211ENST00000549101 FOXK1P85037 733 aa14.62□□□□□ -0.07
USP15-211ENST00000549101 DSG2Q14126 1118 aa14.62□□□□□ -0.07
USP15-211ENST00000549101 PLPP6Q8IY26 295 aa14.58□□□□□ -0.08
USP15-211ENST00000549101 SNPHO15079 494 aa14.57□□□□□ -0.08
USP15-211ENST00000549101 MFSD10Q14728 455 aa14.57□□□□□ -0.08
USP15-211ENST00000549101 DDX27Q96GQ7 796 aaKnown RBP14.57□□□□□ -0.08
USP15-211ENST00000549101 PPP1R15BQ5SWA1 713 aa14.56□□□□□ -0.08
USP15-211ENST00000549101 HOXB3P14651 431 aaPredicted RBP14.55□□□□□ -0.08
USP15-211ENST00000549101 DOK7Q18PE1 504 aa14.5□□□□□ -0.09
USP15-211ENST00000549101 FAM163AQ96GL9 167 aaPredicted RBP14.5□□□□□ -0.09
USP15-211ENST00000549101 WDR70Q9NW82 654 aa14.5□□□□□ -0.09
USP15-211ENST00000549101 SLC34A2O95436 690 aa14.46□□□□□ -0.09
USP15-211ENST00000549101 KDM2AQ9Y2K7 1162 aa14.46□□□□□ -0.09
USP15-211ENST00000549101 ZNF710Q8N1W2 664 aa14.45□□□□□ -0.1
USP15-211ENST00000549101 RIMBP2O15034 1052 aa14.43□□□□□ -0.1
USP15-211ENST00000549101 ST18O60284 1047 aa14.43□□□□□ -0.1
USP15-211ENST00000549101 VSIG10Q8N0Z9 540 aa14.43□□□□□ -0.1
USP15-211ENST00000549101 CAMK2BQ13554 666 aa14.41□□□□□ -0.1
USP15-211ENST00000549101 PTCD2Q8WV60 388 aaKnown RBP14.41□□□□□ -0.1
USP15-211ENST00000549101 ZSWIM6Q9HCJ5 1215 aa14.4□□□□□ -0.1
USP15-211ENST00000549101 E2F4Q16254 413 aa14.39□□□□□ -0.11
USP15-211ENST00000549101 LCE2DQ5TA82 110 aaPredicted RBP14.39□□□□□ -0.11
USP15-211ENST00000549101 GPR153Q6NV75 609 aa14.39□□□□□ -0.11
USP15-211ENST00000549101 EMILIN3Q9NT22 766 aa14.39□□□□□ -0.11
USP15-211ENST00000549101 ARSIQ5FYB1 569 aa14.38□□□□□ -0.11
USP15-211ENST00000549101 UPF1Q92900 1129 aaKnown RBP eCLIP14.38□□□□□ -0.11
USP15-211ENST00000549101 PCDHGA4Q9Y5G9 962 aa14.38□□□□□ -0.11
USP15-211ENST00000549101 OXER1Q8TDS5 423 aa14.37□□□□□ -0.11
USP15-211ENST00000549101 HOXB1P14653 301 aaPredicted RBP14.35□□□□□ -0.11
USP15-211ENST00000549101 KHSRPQ92945 711 aaKnown RBP eCLIP14.35□□□□□ -0.11
USP15-211ENST00000549101 TBC1D12O60347 775 aa14.33□□□□□ -0.12
USP15-211ENST00000549101 MAP3K9P80192 1104 aa14.3□□□□□ -0.12
USP15-211ENST00000549101 MARVELD3Q96A59 401 aa14.29□□□□□ -0.12
USP15-211ENST00000549101 SLC24A1O60721 1099 aa14.28□□□□□ -0.12
USP15-211ENST00000549101 NUDT7P0C024 238 aa14.28□□□□□ -0.12
USP15-211ENST00000549101 DPYSL4O14531 572 aa14.27□□□□□ -0.13
USP15-211ENST00000549101 KCNV2Q8TDN2 545 aa14.27□□□□□ -0.13
USP15-211ENST00000549101 KDM4FA0A1W2PPD8 638 aa14.26□□□□□ -0.13
USP15-211ENST00000549101 ARIH1Q9Y4X5 557 aaPredicted RBP14.24□□□□□ -0.13
USP15-211ENST00000549101 EMP3P54852 163 aa14.23□□□□□ -0.13
USP15-211ENST00000549101 EVI5O60447 810 aa14.21□□□□□ -0.13
USP15-211ENST00000549101 P3H3Q8IVL6 736 aa14.21□□□□□ -0.13
USP15-211ENST00000549101 ARHGEF1Q92888 912 aaKnown RBP14.21□□□□□ -0.13
USP15-211ENST00000549101 ANO8Q9HCE9 1232 aaPredicted RBP14.19□□□□□ -0.14
USP15-211ENST00000549101 LHX6Q9UPM6 363 aa14.19□□□□□ -0.14
USP15-211ENST00000549101 ERBB3P21860 1342 aa14.17□□□□□ -0.14
USP15-211ENST00000549101 FAM205CA6NFA0 338 aa14.17□□□□□ -0.14
USP15-211ENST00000549101 ZNF316A6NFI3 1004 aaPredicted RBP14.17□□□□□ -0.14
USP15-211ENST00000549101 POTEMA6NI47 508 aa14.16□□□□□ -0.14
USP15-211ENST00000549101 POTEGQ6S5H5 508 aa14.16□□□□□ -0.14
USP15-211ENST00000549101 PDIA6Q15084 440 aa14.14□□□□□ -0.15
USP15-211ENST00000549101 POTEB3A0JP26 581 aa14.13□□□□□ -0.15
USP15-211ENST00000549101 SPDYE16A6NNV3 312 aaPredicted RBP14.13□□□□□ -0.15
USP15-211ENST00000549101 POTEBQ6S5H4 581 aa14.13□□□□□ -0.15
USP15-211ENST00000549101 VARS2Q5ST30 1063 aaKnown RBP14.12□□□□□ -0.15
USP15-211ENST00000549101 HS3ST6Q96QI5 342 aa14.11□□□□□ -0.15
USP15-211ENST00000549101 PSDA5PKW4 1024 aaPredicted RBP14.06□□□□□ -0.16
USP15-211ENST00000549101 PTGER2P43116 358 aa14.06□□□□□ -0.16
USP15-211ENST00000549101 ZNF454Q8N9F8 522 aa14.05□□□□□ -0.16
USP15-211ENST00000549101 FOSBP53539 338 aa14.04□□□□□ -0.16
USP15-211ENST00000549101 DDX12PQ92771 950 aa14.04□□□□□ -0.16
USP15-211ENST00000549101 JPH4Q96JJ6 628 aa14.03□□□□□ -0.16
USP15-211ENST00000549101 PCDHGA10Q9Y5H3 936 aa14.02□□□□□ -0.17
USP15-211ENST00000549101 SEMA3EO15041 775 aa14.01□□□□□ -0.17
USP15-211ENST00000549101 PPP4R3BQ5MIZ7 849 aa14.01□□□□□ -0.17
USP15-211ENST00000549101 ZNF687Q8N1G0 1237 aa14.01□□□□□ -0.17
USP15-211ENST00000549101 GRXCR2A6NFK2 248 aa14□□□□□ -0.17
USP15-211ENST00000549101 PHF14O94880 888 aa14□□□□□ -0.17
USP15-211ENST00000549101 MLLT3P42568 568 aaPredicted RBP13.98□□□□□ -0.17
USP15-211ENST00000549101 CDAN1Q8IWY9 1227 aa13.97□□□□□ -0.17
USP15-211ENST00000549101 ZDHHC16Q969W1 377 aa13.97□□□□□ -0.17
USP15-211ENST00000549101 TYW1BQ6NUM6 668 aa13.95□□□□□ -0.18
USP15-211ENST00000549101 EPAS1Q99814 870 aa13.95□□□□□ -0.18
USP15-211ENST00000549101 NBR1Q14596 966 aa13.94□□□□□ -0.18
USP15-211ENST00000549101 POTEEQ6S8J3 1075 aa13.93□□□□□ -0.18
USP15-211ENST00000549101 FBXW7Q969H0 707 aa13.93□□□□□ -0.18
USP15-211ENST00000549101 ADAM33Q9BZ11 813 aa13.93□□□□□ -0.18
USP15-211ENST00000549101 TESPA1A2RU30 521 aaPredicted RBP13.92□□□□□ -0.18
USP15-211ENST00000549101 OSBPP22059 807 aa13.92□□□□□ -0.18
USP15-211ENST00000549101 BCL2L12Q9HB09 334 aa13.91□□□□□ -0.18
USP15-211ENST00000549101 AXIN2Q9Y2T1 843 aa13.91□□□□□ -0.18
USP15-211ENST00000549101 RBM33Q96EV2 1170 aaKnown RBP13.9□□□□□ -0.18
USP15-211ENST00000549101 PLSCR2Q9NRY7 297 aa13.9□□□□□ -0.18
USP15-211ENST00000549101 PRIM1P49642 420 aaKnown RBP13.89□□□□□ -0.19
USP15-211ENST00000549101 ARHGAP33O14559 1287 aa13.88□□□□□ -0.19
USP15-211ENST00000549101 PCDH10Q9P2E7 1040 aa13.88□□□□□ -0.19
USP15-211ENST00000549101 PBX2P40425 430 aa13.87□□□□□ -0.19
USP15-211ENST00000549101 KRTAP3-3Q9BYR6 98 aa13.87□□□□□ -0.19
USP15-211ENST00000549101 KRTAP3-2Q9BYR7 98 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms