RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 KCNH8Q96L42 1107 aa20.47■□□□□ 0.87
LETMD1-209ENST00000547318 TRIM52Q96A61 297 aa20.46■□□□□ 0.87
LETMD1-209ENST00000547318 ADGRL2O95490 1459 aa20.45■□□□□ 0.86
LETMD1-209ENST00000547318 CARMIL2Q6F5E8 1435 aa20.44■□□□□ 0.86
LETMD1-209ENST00000547318 CROCC2H7BZ55 1655 aa20.44■□□□□ 0.86
LETMD1-209ENST00000547318 POLR1AO95602 1720 aaPredicted RBP20.43■□□□□ 0.86
LETMD1-209ENST00000547318 ANKRD30BQ9BXX2 1392 aa20.43■□□□□ 0.86
LETMD1-209ENST00000547318 EIF4G2P78344 907 aaKnown RBP eCLIP20.43■□□□□ 0.86
LETMD1-209ENST00000547318 CHIC2Q9UKJ5 165 aa20.43■□□□□ 0.86
LETMD1-209ENST00000547318 CEP170Q5SW79 1584 aa20.42■□□□□ 0.86
LETMD1-209ENST00000547318 NUP160Q12769 1436 aa20.41■□□□□ 0.86
LETMD1-209ENST00000547318 CAMSAP2Q08AD1 1489 aa20.4■□□□□ 0.86
LETMD1-209ENST00000547318 TEX14Q8IWB6 1497 aa20.4■□□□□ 0.86
LETMD1-209ENST00000547318 NEFLP07196 543 aa20.4■□□□□ 0.86
LETMD1-209ENST00000547318 CNTLNQ9NXG0 1405 aa20.39■□□□□ 0.85
LETMD1-209ENST00000547318 HIRIP3Q9BW71 556 aaPredicted RBP20.37■□□□□ 0.85
LETMD1-209ENST00000547318 ERCC6Q03468 1493 aa20.37■□□□□ 0.85
LETMD1-209ENST00000547318 NCOA1Q15788 1441 aa20.37■□□□□ 0.85
LETMD1-209ENST00000547318 HSPA5P11021 654 aaKnown RBP20.37■□□□□ 0.85
LETMD1-209ENST00000547318 SHANK2Q9UPX8 1470 aa20.36■□□□□ 0.85
LETMD1-209ENST00000547318 GPATCH8Q9UKJ3 1502 aaKnown RBP20.36■□□□□ 0.85
LETMD1-209ENST00000547318 WASHC2AQ641Q2 1341 aa20.34■□□□□ 0.85
LETMD1-209ENST00000547318 L3MBTL2Q969R5 705 aa20.33■□□□□ 0.85
LETMD1-209ENST00000547318 ABCA8O94911 1581 aa20.33■□□□□ 0.84
LETMD1-209ENST00000547318 KIF14Q15058 1648 aa20.32■□□□□ 0.84
LETMD1-209ENST00000547318 PZPP20742 1482 aa20.32■□□□□ 0.84
LETMD1-209ENST00000547318 CHMP7Q8WUX9 453 aaPredicted RBP20.31■□□□□ 0.84
LETMD1-209ENST00000547318 PRG4Q92954 1404 aaPredicted RBP20.31■□□□□ 0.84
LETMD1-209ENST00000547318 ANKRD30AQ9BXX3 1397 aa20.31■□□□□ 0.84
LETMD1-209ENST00000547318 CFDP1Q9UEE9 299 aaPredicted RBP20.3■□□□□ 0.84
LETMD1-209ENST00000547318 PLB1Q6P1J6 1458 aa20.3■□□□□ 0.84
LETMD1-209ENST00000547318 CCDC7Q96M83 1385 aa20.29■□□□□ 0.84
LETMD1-209ENST00000547318 KIAA1107Q9UPP5 1409 aa20.29■□□□□ 0.84
LETMD1-209ENST00000547318 SPATA31E1Q6ZUB1 1445 aa20.28■□□□□ 0.84
LETMD1-209ENST00000547318 SLC4A1APQ9BWU0 796 aaKnown RBP20.28■□□□□ 0.84
LETMD1-209ENST00000547318 MBD5Q9P267 1494 aa20.28■□□□□ 0.84
LETMD1-209ENST00000547318 FKBP8Q14318 412 aa20.27■□□□□ 0.84
LETMD1-209ENST00000547318 KDM5DQ9BY66 1539 aa20.27■□□□□ 0.84
LETMD1-209ENST00000547318 CDC42BPAQ5VT25 1732 aa20.26■□□□□ 0.83
LETMD1-209ENST00000547318 TSHZ2Q9NRE2 1034 aa20.25■□□□□ 0.83
LETMD1-209ENST00000547318 ABCC10Q5T3U5 1492 aa20.25■□□□□ 0.83
LETMD1-209ENST00000547318 ARHGEF5Q12774 1597 aa20.24■□□□□ 0.83
LETMD1-209ENST00000547318 ARID4BQ4LE39 1312 aaPredicted RBP20.24■□□□□ 0.83
LETMD1-209ENST00000547318 ZNF644Q9H582 1327 aaPredicted RBP20.24■□□□□ 0.83
LETMD1-209ENST00000547318 ERICH6BQ5W0A0 696 aa20.23■□□□□ 0.83
LETMD1-209ENST00000547318 JPH4Q96JJ6 628 aa20.23■□□□□ 0.83
LETMD1-209ENST00000547318 ARHGEF12Q9NZN5 1544 aa20.22■□□□□ 0.83
LETMD1-209ENST00000547318 ARID3CA6NKF2 412 aa20.22■□□□□ 0.83
LETMD1-209ENST00000547318 ANKRD50Q9ULJ7 1429 aa20.2■□□□□ 0.82
LETMD1-209ENST00000547318 PLEKHD1A6NEE1 506 aa20.19■□□□□ 0.82
LETMD1-209ENST00000547318 UHRF1BP1Q6BDS2 1440 aa20.19■□□□□ 0.82
LETMD1-209ENST00000547318 ATP10BO94823 1461 aa20.17■□□□□ 0.82
LETMD1-209ENST00000547318 NBPF8Q3BBV2 869 aa20.17■□□□□ 0.82
LETMD1-209ENST00000547318 PRKRIP1Q9H875 184 aaPredicted RBP20.17■□□□□ 0.82
LETMD1-209ENST00000547318 C9orf84Q5VXU9 1444 aa20.16■□□□□ 0.82
LETMD1-209ENST00000547318 HNRNPUQ00839 825 aaKnown RBP eCLIP20.15■□□□□ 0.82
LETMD1-209ENST00000547318 FOXD1Q16676 465 aa20.15■□□□□ 0.82
LETMD1-209ENST00000547318 RALGAPBQ86X10 1494 aa20.13■□□□□ 0.81
LETMD1-209ENST00000547318 ROCK2O75116 1388 aaKnown RBP20.13■□□□□ 0.81
LETMD1-209ENST00000547318 RSPH4AQ5TD94 716 aa20.13■□□□□ 0.81
LETMD1-209ENST00000547318 PTPRGP23470 1445 aa20.13■□□□□ 0.81
LETMD1-209ENST00000547318 KDM5CP41229 1560 aa20.13■□□□□ 0.81
LETMD1-209ENST00000547318 KIF7Q2M1P5 1343 aa20.12■□□□□ 0.81
LETMD1-209ENST00000547318 PREX2Q70Z35 1606 aa20.12■□□□□ 0.81
LETMD1-209ENST00000547318 MAST1Q9Y2H9 1570 aa20.09■□□□□ 0.81
LETMD1-209ENST00000547318 ZBED9Q6R2W3 1325 aa20.08■□□□□ 0.81
LETMD1-209ENST00000547318 TSPY4P0CV99 314 aa20.08■□□□□ 0.8
LETMD1-209ENST00000547318 TSPY10P0CW01 314 aa20.08■□□□□ 0.8
LETMD1-209ENST00000547318 USP47Q96K76 1375 aa20.08■□□□□ 0.8
LETMD1-209ENST00000547318 CCDC141Q6ZP82 1450 aa20.08■□□□□ 0.8
LETMD1-209ENST00000547318 C11orf95C9JLR9 678 aaPredicted RBP20.07■□□□□ 0.8
LETMD1-209ENST00000547318 PKD2Q13563 968 aa20.07■□□□□ 0.8
LETMD1-209ENST00000547318 FBLN2P98095 1184 aa20.06■□□□□ 0.8
LETMD1-209ENST00000547318 BCANQ96GW7 911 aa20.06■□□□□ 0.8
LETMD1-209ENST00000547318 ZNF777Q9ULD5 760 aaPredicted RBP20.06■□□□□ 0.8
LETMD1-209ENST00000547318 NUP155O75694 1391 aa20.04■□□□□ 0.8
LETMD1-209ENST00000547318 KTN1Q86UP2 1357 aaKnown RBP20.04■□□□□ 0.8
LETMD1-209ENST00000547318 MRS2Q9HD23 443 aa20.03■□□□□ 0.8
LETMD1-209ENST00000547318 SHROOM2Q13796 1616 aa20.03■□□□□ 0.8
LETMD1-209ENST00000547318 KIF15Q9NS87 1388 aa20.03■□□□□ 0.8
LETMD1-209ENST00000547318 SAMD9LQ8IVG5 1584 aa20.02■□□□□ 0.8
LETMD1-209ENST00000547318 BCORL1Q5H9F3 1711 aa20.02■□□□□ 0.8
LETMD1-209ENST00000547318 CDC42BPBQ9Y5S2 1711 aa20.02■□□□□ 0.8
LETMD1-209ENST00000547318 PLEKHH2Q8IVE3 1493 aa20.02■□□□□ 0.8
LETMD1-209ENST00000547318 DHX29Q7Z478 1369 aaKnown RBP20.01■□□□□ 0.79
LETMD1-209ENST00000547318 UNC13BO14795 1591 aa20.01■□□□□ 0.79
LETMD1-209ENST00000547318 PLXNC1O60486 1568 aa20■□□□□ 0.79
LETMD1-209ENST00000547318 FAM135AQ9P2D6 1515 aa19.97■□□□□ 0.79
LETMD1-209ENST00000547318 LAMC1P11047 1609 aa19.97■□□□□ 0.79
LETMD1-209ENST00000547318 PPP4R2Q9NY27 417 aa19.94■□□□□ 0.78
LETMD1-209ENST00000547318 E9PCH4 1651 aa19.93■□□□□ 0.78
LETMD1-209ENST00000547318 CHD1O14646 1710 aa19.93■□□□□ 0.78
LETMD1-209ENST00000547318 MYO5CQ9NQX4 1742 aa19.93■□□□□ 0.78
LETMD1-209ENST00000547318 CCDC184Q52MB2 194 aa19.92■□□□□ 0.78
LETMD1-209ENST00000547318 SMG6Q86US8 1419 aaKnown RBP19.92■□□□□ 0.78
LETMD1-209ENST00000547318 ABCC2Q92887 1545 aa19.92■□□□□ 0.78
LETMD1-209ENST00000547318 IQGAP3Q86VI3 1631 aa19.92■□□□□ 0.78
LETMD1-209ENST00000547318 FAM9BQ8IZU0 186 aa19.91■□□□□ 0.78
LETMD1-209ENST00000547318 TRPM1Q7Z4N2 1603 aa19.9■□□□□ 0.78
LETMD1-209ENST00000547318 EIF2AK4Q9P2K8 1649 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms