RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 FER1L4A9Z1Z3 1794 aa21.99■■□□□ 1.11
RAB5B-203ENST00000546810 DMRT2Q9Y5R5 561 aa21.98■■□□□ 1.11
RAB5B-203ENST00000546810 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.96■■□□□ 1.11
RAB5B-203ENST00000546810 HECW1Q76N89 1606 aa21.95■■□□□ 1.1
RAB5B-203ENST00000546810 SPATA31D1Q6ZQQ2 1576 aa21.94■■□□□ 1.1
RAB5B-203ENST00000546810 PREX1Q8TCU6 1659 aa21.93■■□□□ 1.1
RAB5B-203ENST00000546810 ARHGEF12Q9NZN5 1544 aa21.93■■□□□ 1.1
RAB5B-203ENST00000546810 CEBPAP49715 358 aaPredicted RBP21.92■■□□□ 1.1
RAB5B-203ENST00000546810 SCAPERQ9BY12 1400 aa21.9■■□□□ 1.1
RAB5B-203ENST00000546810 ATP10AO60312 1499 aa21.9■■□□□ 1.1
RAB5B-203ENST00000546810 RANGAP1P46060 587 aaPredicted RBP21.89■■□□□ 1.09
RAB5B-203ENST00000546810 C9orf84Q5VXU9 1444 aa21.89■■□□□ 1.09
RAB5B-203ENST00000546810 STRCQ7RTU9 1775 aa21.88■■□□□ 1.09
RAB5B-203ENST00000546810 UHRF1BP1Q6BDS2 1440 aa21.87■■□□□ 1.09
RAB5B-203ENST00000546810 PLCH2O75038 1416 aa21.84■■□□□ 1.09
RAB5B-203ENST00000546810 PTPRTO14522 1441 aa21.82■■□□□ 1.08
RAB5B-203ENST00000546810 UBTFP17480 764 aaKnown RBP21.77■■□□□ 1.08
RAB5B-203ENST00000546810 EFCAB2Q5VUJ9 269 aa21.77■■□□□ 1.08
RAB5B-203ENST00000546810 CDK13Q14004 1512 aaKnown RBP21.76■■□□□ 1.07
RAB5B-203ENST00000546810 EHMT2Q96KQ7 1210 aa21.75■■□□□ 1.07
RAB5B-203ENST00000546810 LTBP4Q8N2S1 1624 aa21.75■■□□□ 1.07
RAB5B-203ENST00000546810 IQSEC2Q5JU85 1478 aa21.74■■□□□ 1.07
RAB5B-203ENST00000546810 SETD1BQ9UPS6 1966 aaKnown RBP21.74■■□□□ 1.07
RAB5B-203ENST00000546810 ZNF518AQ6AHZ1 1483 aa21.72■■□□□ 1.07
RAB5B-203ENST00000546810 MYT1LQ9UL68 1186 aa21.71■■□□□ 1.07
RAB5B-203ENST00000546810 AFAP1Q8N556 730 aa21.7■■□□□ 1.06
RAB5B-203ENST00000546810 MYO5CQ9NQX4 1742 aa21.67■■□□□ 1.06
RAB5B-203ENST00000546810 KDM5CP41229 1560 aa21.67■■□□□ 1.06
RAB5B-203ENST00000546810 NCOA1Q15788 1441 aa21.67■■□□□ 1.06
RAB5B-203ENST00000546810 TRAPPC8Q9Y2L5 1435 aa21.67■■□□□ 1.06
RAB5B-203ENST00000546810 ESF1Q9H501 851 aaKnown RBP21.67■■□□□ 1.06
RAB5B-203ENST00000546810 C3P01024 1663 aa21.66■■□□□ 1.06
RAB5B-203ENST00000546810 DIP2CQ9Y2E4 1556 aa21.65■■□□□ 1.06
RAB5B-203ENST00000546810 REREQ9P2R6 1566 aa21.65■■□□□ 1.06
RAB5B-203ENST00000546810 ATP1B4Q9UN42 357 aaPredicted RBP21.63■■□□□ 1.05
RAB5B-203ENST00000546810 ARHGAP5Q13017 1502 aa21.62■■□□□ 1.05
RAB5B-203ENST00000546810 CDK11AQ9UQ88 783 aaPredicted RBP21.62■■□□□ 1.05
RAB5B-203ENST00000546810 UBAP1LF5GYI3 381 aa21.6■■□□□ 1.05
RAB5B-203ENST00000546810 AGLP35573 1532 aa21.6■■□□□ 1.05
RAB5B-203ENST00000546810 MLH3Q9UHC1 1453 aa21.59■■□□□ 1.05
RAB5B-203ENST00000546810 KIF14Q15058 1648 aa21.59■■□□□ 1.05
RAB5B-203ENST00000546810 ABCA6Q8N139 1617 aa21.58■■□□□ 1.05
RAB5B-203ENST00000546810 CNTLNQ9NXG0 1405 aa21.57■■□□□ 1.04
RAB5B-203ENST00000546810 ZNF335Q9H4Z2 1342 aaPredicted RBP21.56■■□□□ 1.04
RAB5B-203ENST00000546810 CAMSAP1Q5T5Y3 1602 aa21.56■■□□□ 1.04
RAB5B-203ENST00000546810 TROQ12816 1431 aaPredicted RBP21.55■■□□□ 1.04
RAB5B-203ENST00000546810 FMN1Q68DA7 1419 aa21.55■■□□□ 1.04
RAB5B-203ENST00000546810 NCKAP5LQ9HCH0 1330 aa21.54■■□□□ 1.04
RAB5B-203ENST00000546810 CLIP1P30622 1438 aa21.53■■□□□ 1.04
RAB5B-203ENST00000546810 NPATQ14207 1427 aa21.52■■□□□ 1.04
RAB5B-203ENST00000546810 LOC105371045A0A1W2PR82 267 aa21.48■■□□□ 1.03
RAB5B-203ENST00000546810 ABCC1P33527 1531 aa21.47■■□□□ 1.03
RAB5B-203ENST00000546810 PKD2Q13563 968 aa21.47■■□□□ 1.03
RAB5B-203ENST00000546810 ZMYM3Q14202 1370 aa21.47■■□□□ 1.03
RAB5B-203ENST00000546810 CDC42BPBQ9Y5S2 1711 aa21.45■■□□□ 1.02
RAB5B-203ENST00000546810 PLA2R1Q13018 1463 aa21.44■■□□□ 1.02
RAB5B-203ENST00000546810 MROH2AA6NES4 1674 aa21.44■■□□□ 1.02
RAB5B-203ENST00000546810 KIDINS220Q9ULH0 1771 aa21.43■■□□□ 1.02
RAB5B-203ENST00000546810 ARHGAP35Q9NRY4 1499 aa21.42■■□□□ 1.02
RAB5B-203ENST00000546810 ITSN2Q9NZM3 1697 aa21.42■■□□□ 1.02
RAB5B-203ENST00000546810 PREX2Q70Z35 1606 aa21.41■■□□□ 1.02
RAB5B-203ENST00000546810 MED1Q15648 1581 aaPredicted RBP21.41■■□□□ 1.02
RAB5B-203ENST00000546810 HSPA1LP34931 641 aa21.41■■□□□ 1.02
RAB5B-203ENST00000546810 TCOF1Q13428 1488 aaKnown RBP21.4■■□□□ 1.02
RAB5B-203ENST00000546810 SCAF1Q9H7N4 1312 aaKnown RBP21.4■■□□□ 1.02
RAB5B-203ENST00000546810 PPP6R1Q9UPN7 881 aa21.4■■□□□ 1.02
RAB5B-203ENST00000546810 ZNF142P52746 1687 aaPredicted RBP21.37■■□□□ 1.01
RAB5B-203ENST00000546810 MYO3AQ8NEV4 1616 aa21.37■■□□□ 1.01
RAB5B-203ENST00000546810 PIP4K2BP78356 416 aa21.37■■□□□ 1.01
RAB5B-203ENST00000546810 CEP170BQ9Y4F5 1589 aaPredicted RBP21.36■■□□□ 1.01
RAB5B-203ENST00000546810 PTPRKQ15262 1439 aa21.35■■□□□ 1.01
RAB5B-203ENST00000546810 CEP162Q5TB80 1403 aa21.35■■□□□ 1.01
RAB5B-203ENST00000546810 SAMD9LQ8IVG5 1584 aa21.35■■□□□ 1.01
RAB5B-203ENST00000546810 TOM1O60784 492 aa21.34■■□□□ 1.01
RAB5B-203ENST00000546810 LRRIQ1Q96JM4 1722 aa21.34■■□□□ 1.01
RAB5B-203ENST00000546810 SPAG9O60271 1321 aaKnown RBP21.33■■□□□ 1.01
RAB5B-203ENST00000546810 CLTCQ00610 1675 aaKnown RBP21.32■■□□□ 1
RAB5B-203ENST00000546810 ZNF777Q9ULD5 760 aaPredicted RBP21.32■■□□□ 1
RAB5B-203ENST00000546810 SUPT6HQ7KZ85 1726 aaKnown RBP21.32■■□□□ 1
RAB5B-203ENST00000546810 PHF23Q9BUL5 403 aaPredicted RBP21.3■■□□□ 1
RAB5B-203ENST00000546810 GGT6Q6P531 493 aa21.29■■□□□ 1
RAB5B-203ENST00000546810 CPS1P31327 1500 aa21.28■■□□□ 1
RAB5B-203ENST00000546810 SYCP2Q9BX26 1530 aa21.28■■□□□ 1
RAB5B-203ENST00000546810 A2MP01023 1474 aa21.27■■□□□ 1
RAB5B-203ENST00000546810 CCDC18Q5T9S5 1454 aa21.27■■□□□ 1
RAB5B-203ENST00000546810 CDC42BPAQ5VT25 1732 aa21.27■■□□□ 1
RAB5B-203ENST00000546810 HNRNPMP52272 730 aaKnown RBP eCLIP21.27■■□□□ 1
RAB5B-203ENST00000546810 PLXNC1O60486 1568 aa21.26■□□□□ 0.99
RAB5B-203ENST00000546810 A2ML1A8K2U0 1454 aa21.26■□□□□ 0.99
RAB5B-203ENST00000546810 ATP7AQ04656 1500 aa21.25■□□□□ 0.99
RAB5B-203ENST00000546810 SHANK2Q9UPX8 1470 aa21.24■□□□□ 0.99
RAB5B-203ENST00000546810 CASKIN1Q8WXD9 1431 aa21.23■□□□□ 0.99
RAB5B-203ENST00000546810 DNMT1P26358 1616 aaKnown RBP21.22■□□□□ 0.99
RAB5B-203ENST00000546810 GPATCH8Q9UKJ3 1502 aaKnown RBP21.2■□□□□ 0.98
RAB5B-203ENST00000546810 INO80Q9ULG1 1556 aaPredicted RBP21.2■□□□□ 0.98
RAB5B-203ENST00000546810 KIAA1107Q9UPP5 1409 aa21.2■□□□□ 0.98
RAB5B-203ENST00000546810 NEURL4Q96JN8 1562 aa21.19■□□□□ 0.98
RAB5B-203ENST00000546810 PLEKHH2Q8IVE3 1493 aa21.18■□□□□ 0.98
RAB5B-203ENST00000546810 POLR1AO95602 1720 aaPredicted RBP21.15■□□□□ 0.98
RAB5B-203ENST00000546810 CFDP1Q9UEE9 299 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms