RNA–Protein interactions for RNA: ENST00000546748.1

ERBB3-204, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-204ENST00000546748 ABCC5O15440 1437 aa11.26□□□□□ -0.61
ERBB3-204ENST00000546748 ABCC10Q5T3U5 1492 aa11.25□□□□□ -0.61
ERBB3-204ENST00000546748 ABCC2Q92887 1545 aa11.25□□□□□ -0.61
ERBB3-204ENST00000546748 ZNF644Q9H582 1327 aaPredicted RBP11.23□□□□□ -0.61
ERBB3-204ENST00000546748 UHRF1BP1LA0JNW5 1464 aa11.22□□□□□ -0.61
ERBB3-204ENST00000546748 NEUROD1Q13562 356 aa11.22□□□□□ -0.61
ERBB3-204ENST00000546748 TRIM52Q96A61 297 aa11.22□□□□□ -0.61
ERBB3-204ENST00000546748 SHANK2Q9UPX8 1470 aa11.21□□□□□ -0.61
ERBB3-204ENST00000546748 TONSLQ96HA7 1378 aa11.21□□□□□ -0.61
ERBB3-204ENST00000546748 ANKRD30AQ9BXX3 1397 aa11.21□□□□□ -0.61
ERBB3-204ENST00000546748 ZNF777Q9ULD5 760 aaPredicted RBP11.21□□□□□ -0.61
ERBB3-204ENST00000546748 ADGRL2O95490 1459 aa11.2□□□□□ -0.62
ERBB3-204ENST00000546748 SIN3AQ96ST3 1273 aa11.2□□□□□ -0.62
ERBB3-204ENST00000546748 CDC42BPAQ5VT25 1732 aa11.2□□□□□ -0.62
ERBB3-204ENST00000546748 ADGBQ8N7X0 1667 aa11.2□□□□□ -0.62
ERBB3-204ENST00000546748 ERCC6L2Q5T890 1561 aa11.19□□□□□ -0.62
ERBB3-204ENST00000546748 NCOA1Q15788 1441 aa11.18□□□□□ -0.62
ERBB3-204ENST00000546748 CROCC2H7BZ55 1655 aa11.18□□□□□ -0.62
ERBB3-204ENST00000546748 RSPH4AQ5TD94 716 aa11.18□□□□□ -0.62
ERBB3-204ENST00000546748 ARHGEF5Q12774 1597 aa11.16□□□□□ -0.62
ERBB3-204ENST00000546748 TSPY4P0CV99 314 aa11.16□□□□□ -0.62
ERBB3-204ENST00000546748 TSPY10P0CW01 314 aa11.16□□□□□ -0.62
ERBB3-204ENST00000546748 MPHOSPH9Q99550 1183 aa11.16□□□□□ -0.62
ERBB3-204ENST00000546748 PLEKHH2Q8IVE3 1493 aa11.16□□□□□ -0.62
ERBB3-204ENST00000546748 C9orf84Q5VXU9 1444 aa11.16□□□□□ -0.62
ERBB3-204ENST00000546748 KDM6BO15054 1643 aa11.16□□□□□ -0.62
ERBB3-204ENST00000546748 PREX2Q70Z35 1606 aa11.16□□□□□ -0.62
ERBB3-204ENST00000546748 KDM5BQ9UGL1 1544 aa11.15□□□□□ -0.62
ERBB3-204ENST00000546748 PPP1R15AO75807 674 aaPredicted RBP11.15□□□□□ -0.62
ERBB3-204ENST00000546748 CCDC141Q6ZP82 1450 aa11.14□□□□□ -0.63
ERBB3-204ENST00000546748 ARHGAP5Q13017 1502 aa11.13□□□□□ -0.63
ERBB3-204ENST00000546748 ZCCHC11Q5TAX3 1644 aaKnown RBP11.13□□□□□ -0.63
ERBB3-204ENST00000546748 ANKRD50Q9ULJ7 1429 aa11.12□□□□□ -0.63
ERBB3-204ENST00000546748 SLC4A1APQ9BWU0 796 aaKnown RBP11.12□□□□□ -0.63
ERBB3-204ENST00000546748 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.12□□□□□ -0.63
ERBB3-204ENST00000546748 TTC37Q6PGP7 1564 aa11.11□□□□□ -0.63
ERBB3-204ENST00000546748 KIAA1107Q9UPP5 1409 aa11.11□□□□□ -0.63
ERBB3-204ENST00000546748 OSCARQ8IYS5 282 aa11.11□□□□□ -0.63
ERBB3-204ENST00000546748 MBD5Q9P267 1494 aa11.11□□□□□ -0.63
ERBB3-204ENST00000546748 SAMD9LQ8IVG5 1584 aa11.11□□□□□ -0.63
ERBB3-204ENST00000546748 MYO5CQ9NQX4 1742 aa11.1□□□□□ -0.63
ERBB3-204ENST00000546748 CDC42BPBQ9Y5S2 1711 aa11.1□□□□□ -0.63
ERBB3-204ENST00000546748 KIF15Q9NS87 1388 aa11.1□□□□□ -0.63
ERBB3-204ENST00000546748 DENND4BO75064 1496 aaPredicted RBP11.1□□□□□ -0.63
ERBB3-204ENST00000546748 ANKRD30BQ9BXX2 1392 aa11.09□□□□□ -0.63
ERBB3-204ENST00000546748 HNRNPMP52272 730 aaKnown RBP eCLIP11.09□□□□□ -0.63
ERBB3-204ENST00000546748 EFCAB2Q5VUJ9 269 aa11.09□□□□□ -0.63
ERBB3-204ENST00000546748 KCNH8Q96L42 1107 aa11.09□□□□□ -0.63
ERBB3-204ENST00000546748 PLCH2O75038 1416 aa11.09□□□□□ -0.63
ERBB3-204ENST00000546748 PZPP20742 1482 aa11.08□□□□□ -0.64
ERBB3-204ENST00000546748 CENPBP07199 599 aaPredicted RBP11.08□□□□□ -0.64
ERBB3-204ENST00000546748 MAST1Q9Y2H9 1570 aa11.07□□□□□ -0.64
ERBB3-204ENST00000546748 ARAP3Q8WWN8 1544 aa11.07□□□□□ -0.64
ERBB3-204ENST00000546748 SYCP2Q9BX26 1530 aa11.07□□□□□ -0.64
ERBB3-204ENST00000546748 RPRD2Q5VT52 1461 aaKnown RBP11.06□□□□□ -0.64
ERBB3-204ENST00000546748 WDR7Q9Y4E6 1490 aa11.06□□□□□ -0.64
ERBB3-204ENST00000546748 KDM5DQ9BY66 1539 aa11.06□□□□□ -0.64
ERBB3-204ENST00000546748 MIER1Q8N108 512 aa11.06□□□□□ -0.64
ERBB3-204ENST00000546748 NUP155O75694 1391 aa11.04□□□□□ -0.64
ERBB3-204ENST00000546748 PLXNC1O60486 1568 aa11.03□□□□□ -0.64
ERBB3-204ENST00000546748 NPM1P06748 294 aaKnown RBP eCLIP11.03□□□□□ -0.64
ERBB3-204ENST00000546748 PKD2Q13563 968 aa11.03□□□□□ -0.64
ERBB3-204ENST00000546748 FOXD1Q16676 465 aa11.03□□□□□ -0.64
ERBB3-204ENST00000546748 ABCC1P33527 1531 aa11.02□□□□□ -0.65
ERBB3-204ENST00000546748 L3MBTL2Q969R5 705 aa11.01□□□□□ -0.65
ERBB3-204ENST00000546748 TEX14Q8IWB6 1497 aa11□□□□□ -0.65
ERBB3-204ENST00000546748 DUOX2Q9NRD8 1548 aa11□□□□□ -0.65
ERBB3-204ENST00000546748 ASXL2Q76L83 1435 aa11□□□□□ -0.65
ERBB3-204ENST00000546748 ERBINQ96RT1 1412 aa11□□□□□ -0.65
ERBB3-204ENST00000546748 ABCA9Q8IUA7 1624 aa10.99□□□□□ -0.65
ERBB3-204ENST00000546748 RTEL1-TNFRSF6BF6WH68 1400 aa10.99□□□□□ -0.65
ERBB3-204ENST00000546748 ARHGEF12Q9NZN5 1544 aa10.98□□□□□ -0.65
ERBB3-204ENST00000546748 UNC13BO14795 1591 aa10.98□□□□□ -0.65
ERBB3-204ENST00000546748 EIF4G2P78344 907 aaKnown RBP eCLIP10.97□□□□□ -0.65
ERBB3-204ENST00000546748 SPAG9O60271 1321 aaKnown RBP10.97□□□□□ -0.65
ERBB3-204ENST00000546748 FANCAO15360 1455 aa10.97□□□□□ -0.65
ERBB3-204ENST00000546748 FAM135AQ9P2D6 1515 aa10.97□□□□□ -0.65
ERBB3-204ENST00000546748 TRAPPC8Q9Y2L5 1435 aa10.96□□□□□ -0.65
ERBB3-204ENST00000546748 DDX10Q13206 875 aaKnown RBP10.95□□□□□ -0.66
ERBB3-204ENST00000546748 HSPA5P11021 654 aaKnown RBP10.94□□□□□ -0.66
ERBB3-204ENST00000546748 IQGAP3Q86VI3 1631 aa10.93□□□□□ -0.66
ERBB3-204ENST00000546748 ADGRL1O94910 1474 aa10.93□□□□□ -0.66
ERBB3-204ENST00000546748 MAGI2Q86UL8 1455 aa10.93□□□□□ -0.66
ERBB3-204ENST00000546748 CFAP74Q9C0B2 1584 aa10.92□□□□□ -0.66
ERBB3-204ENST00000546748 YTHDC1Q96MU7 727 aaKnown RBP10.92□□□□□ -0.66
ERBB3-204ENST00000546748 ZFYVE16Q7Z3T8 1539 aa10.92□□□□□ -0.66
ERBB3-204ENST00000546748 SCAPERQ9BY12 1400 aa10.92□□□□□ -0.66
ERBB3-204ENST00000546748 ANP32CO43423 234 aa10.91□□□□□ -0.66
ERBB3-204ENST00000546748 NBPF8Q3BBV2 869 aa10.91□□□□□ -0.66
ERBB3-204ENST00000546748 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.91□□□□□ -0.661e-7■□□□□ 8.2
ERBB3-204ENST00000546748 HIRIP3Q9BW71 556 aaPredicted RBP10.91□□□□□ -0.66
ERBB3-204ENST00000546748 CCDC144AA2RUR9 1427 aa10.91□□□□□ -0.66
ERBB3-204ENST00000546748 ATP7AQ04656 1500 aa10.9□□□□□ -0.66
ERBB3-204ENST00000546748 AFAP1Q8N556 730 aa10.9□□□□□ -0.66
ERBB3-204ENST00000546748 UHRF1BP1Q6BDS2 1440 aa10.9□□□□□ -0.66
ERBB3-204ENST00000546748 CD109Q6YHK3 1445 aa10.9□□□□□ -0.66
ERBB3-204ENST00000546748 INO80Q9ULG1 1556 aaPredicted RBP10.9□□□□□ -0.67
ERBB3-204ENST00000546748 KANK1Q14678 1352 aa10.89□□□□□ -0.67
ERBB3-204ENST00000546748 ATP10AO60312 1499 aa10.88□□□□□ -0.67
ERBB3-204ENST00000546748 ZNF518AQ6AHZ1 1483 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms