RNA–Protein interactions for RNA: ENST00000546696.1

AC078880.1-201, humanhuman

TSL 4 BASIC

Gene AC078880.1, Length 553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.1-201ENST00000546696 AMER1Q5JTC6 1135 aaPredicted RBP16.77■□□□□ 0.28
AC078880.1-201ENST00000546696 PPP1R37O75864 691 aa16.73■□□□□ 0.27
AC078880.1-201ENST00000546696 NKX1-1Q15270 411 aaPredicted RBP16.73■□□□□ 0.27
AC078880.1-201ENST00000546696 ZNF710Q8N1W2 664 aa16.73■□□□□ 0.27
AC078880.1-201ENST00000546696 POTEB3A0JP26 581 aa16.72■□□□□ 0.27
AC078880.1-201ENST00000546696 POTEBQ6S5H4 581 aa16.72■□□□□ 0.27
AC078880.1-201ENST00000546696 FAM205CA6NFA0 338 aa16.71■□□□□ 0.27
AC078880.1-201ENST00000546696 DOK7Q18PE1 504 aa16.7■□□□□ 0.26
AC078880.1-201ENST00000546696 RYDENQ9NUL5 291 aaKnown RBP16.7■□□□□ 0.26
AC078880.1-201ENST00000546696 HS3ST6Q96QI5 342 aa16.67■□□□□ 0.26
AC078880.1-201ENST00000546696 RTN4Q9NQC3 1192 aaKnown RBP16.65■□□□□ 0.26
AC078880.1-201ENST00000546696 HOXB1P14653 301 aaPredicted RBP16.63■□□□□ 0.25
AC078880.1-201ENST00000546696 C2orf72A6NCS6 295 aa16.62■□□□□ 0.25
AC078880.1-201ENST00000546696 KIF3CO14782 793 aa16.61■□□□□ 0.25
AC078880.1-201ENST00000546696 RIMBP2O15034 1052 aa16.59■□□□□ 0.25
AC078880.1-201ENST00000546696 TMC2Q8TDI7 906 aa16.57■□□□□ 0.24
AC078880.1-201ENST00000546696 ERBB3P21860 1342 aa16.54■□□□□ 0.24
AC078880.1-201ENST00000546696 GTPBP6O43824 516 aaPredicted RBP16.54■□□□□ 0.24
AC078880.1-201ENST00000546696 GPR153Q6NV75 609 aa16.54■□□□□ 0.24
AC078880.1-201ENST00000546696 KHSRPQ92945 711 aaKnown RBP eCLIP16.54■□□□□ 0.24
AC078880.1-201ENST00000546696 ARSIQ5FYB1 569 aa16.53■□□□□ 0.24
AC078880.1-201ENST00000546696 ZSWIM6Q9HCJ5 1215 aa16.53■□□□□ 0.24
AC078880.1-201ENST00000546696 KRTAP3-3Q9BYR6 98 aa16.51■□□□□ 0.23
AC078880.1-201ENST00000546696 KRTAP3-2Q9BYR7 98 aa16.51■□□□□ 0.23
AC078880.1-201ENST00000546696 VARS2Q5ST30 1063 aaKnown RBP16.49■□□□□ 0.23
AC078880.1-201ENST00000546696 SPNS2Q8IVW8 549 aa16.46■□□□□ 0.23
AC078880.1-201ENST00000546696 GPHNQ9NQX3 736 aaPredicted RBP16.44■□□□□ 0.22
AC078880.1-201ENST00000546696 BBXQ8WY36 941 aaPredicted RBP16.42■□□□□ 0.22
AC078880.1-201ENST00000546696 FOXK1P85037 733 aa16.4■□□□□ 0.22
AC078880.1-201ENST00000546696 SLC34A2O95436 690 aa16.39■□□□□ 0.21
AC078880.1-201ENST00000546696 NUDT7P0C024 238 aa16.37■□□□□ 0.21
AC078880.1-201ENST00000546696 MMRN1Q13201 1228 aa16.37■□□□□ 0.21
AC078880.1-201ENST00000546696 DSG2Q14126 1118 aa16.34■□□□□ 0.21
AC078880.1-201ENST00000546696 PLPP6Q8IY26 295 aa16.34■□□□□ 0.21
AC078880.1-201ENST00000546696 CRISPLD2Q9H0B8 497 aa16.34■□□□□ 0.21
AC078880.1-201ENST00000546696 PCDHGA4Q9Y5G9 962 aa16.34■□□□□ 0.21
AC078880.1-201ENST00000546696 ZNF316A6NFI3 1004 aaPredicted RBP16.31■□□□□ 0.2
AC078880.1-201ENST00000546696 PDE4AP27815 886 aa16.29■□□□□ 0.2
AC078880.1-201ENST00000546696 NCKAP5LQ9HCH0 1330 aa16.28■□□□□ 0.2
AC078880.1-201ENST00000546696 ZNF687Q8N1G0 1237 aa16.28■□□□□ 0.2
AC078880.1-201ENST00000546696 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
AC078880.1-201ENST00000546696 LHX6Q9UPM6 363 aa16.26■□□□□ 0.19
AC078880.1-201ENST00000546696 PTCD2Q8WV60 388 aaKnown RBP16.25■□□□□ 0.19
AC078880.1-201ENST00000546696 SPRYD3Q8NCJ5 442 aa16.23■□□□□ 0.19
AC078880.1-201ENST00000546696 PPP1R15BQ5SWA1 713 aa16.22■□□□□ 0.19
AC078880.1-201ENST00000546696 LARP6Q9BRS8 491 aaKnown RBP16.2■□□□□ 0.18
AC078880.1-201ENST00000546696 TBC1D12O60347 775 aa16.17■□□□□ 0.18
AC078880.1-201ENST00000546696 CADPS2Q86UW7 1296 aa16.17■□□□□ 0.18
AC078880.1-201ENST00000546696 DDX27Q96GQ7 796 aaKnown RBP16.17■□□□□ 0.18
AC078880.1-201ENST00000546696 MFSD10Q14728 455 aa16.15■□□□□ 0.18
AC078880.1-201ENST00000546696 UPF1Q92900 1129 aaKnown RBP eCLIP16.14■□□□□ 0.17
AC078880.1-201ENST00000546696 AXIN2Q9Y2T1 843 aa16.14■□□□□ 0.17
AC078880.1-201ENST00000546696 KDM4FA0A1W2PPD8 638 aa16.13■□□□□ 0.17
AC078880.1-201ENST00000546696 OXER1Q8TDS5 423 aa16.13■□□□□ 0.17
AC078880.1-201ENST00000546696 POTEEQ6S8J3 1075 aa16.12■□□□□ 0.17
AC078880.1-201ENST00000546696 ANKRD13DQ6ZTN6 518 aa16.12■□□□□ 0.17
AC078880.1-201ENST00000546696 PAXIP1Q6ZW49 1069 aaPredicted RBP16.11■□□□□ 0.17
AC078880.1-201ENST00000546696 CFAP44Q96MT7 982 aa16.09■□□□□ 0.17
AC078880.1-201ENST00000546696 PSDA5PKW4 1024 aaPredicted RBP16.06■□□□□ 0.16
AC078880.1-201ENST00000546696 LSM11P83369 360 aaKnown RBP eCLIP16.05■□□□□ 0.16
AC078880.1-201ENST00000546696 MYT1LQ9UL68 1186 aa16■□□□□ 0.15
AC078880.1-201ENST00000546696 RNF166Q96A37 237 aaPredicted RBP15.99■□□□□ 0.15
AC078880.1-201ENST00000546696 PBX2P40425 430 aa15.98■□□□□ 0.15
AC078880.1-201ENST00000546696 EMILIN3Q9NT22 766 aa15.96■□□□□ 0.15
AC078880.1-201ENST00000546696 PSEN2P49810 448 aa15.95■□□□□ 0.14
AC078880.1-201ENST00000546696 MAP3K9P80192 1104 aa15.95■□□□□ 0.14
AC078880.1-201ENST00000546696 PPP4R3BQ5MIZ7 849 aa15.94■□□□□ 0.14
AC078880.1-201ENST00000546696 CAMK2BQ13554 666 aa15.93■□□□□ 0.14
AC078880.1-201ENST00000546696 ARHGAP33O14559 1287 aa15.92■□□□□ 0.14
AC078880.1-201ENST00000546696 EVI5O60447 810 aa15.92■□□□□ 0.14
AC078880.1-201ENST00000546696 DMRTA1Q5VZB9 504 aa15.92■□□□□ 0.14
AC078880.1-201ENST00000546696 ANO8Q9HCE9 1232 aaPredicted RBP15.92■□□□□ 0.14
AC078880.1-201ENST00000546696 ZNF454Q8N9F8 522 aa15.88■□□□□ 0.13
AC078880.1-201ENST00000546696 KCNK17Q96T54 332 aa15.86■□□□□ 0.13
AC078880.1-201ENST00000546696 ADGRD1Q6QNK2 874 aa15.85■□□□□ 0.13
AC078880.1-201ENST00000546696 PTGER2P43116 358 aa15.83■□□□□ 0.12
AC078880.1-201ENST00000546696 FOSBP53539 338 aa15.83■□□□□ 0.12
AC078880.1-201ENST00000546696 JPH4Q96JJ6 628 aa15.82■□□□□ 0.12
AC078880.1-201ENST00000546696 WDR70Q9NW82 654 aa15.81■□□□□ 0.12
AC078880.1-201ENST00000546696 DPYSL4O14531 572 aa15.8■□□□□ 0.12
AC078880.1-201ENST00000546696 KCNH8Q96L42 1107 aa15.78■□□□□ 0.12
AC078880.1-201ENST00000546696 E2F4Q16254 413 aa15.77■□□□□ 0.12
AC078880.1-201ENST00000546696 BCL2L12Q9HB09 334 aa15.77■□□□□ 0.12
AC078880.1-201ENST00000546696 TSHZ2Q9NRE2 1034 aa15.76■□□□□ 0.11
AC078880.1-201ENST00000546696 ZDHHC16Q969W1 377 aa15.74■□□□□ 0.11
AC078880.1-201ENST00000546696 TK2O00142 265 aa15.72■□□□□ 0.11
AC078880.1-201ENST00000546696 HRO43593 1189 aa15.72■□□□□ 0.11
AC078880.1-201ENST00000546696 ADAM33Q9BZ11 813 aa15.72■□□□□ 0.11
AC078880.1-201ENST00000546696 PCDHGA10Q9Y5H3 936 aa15.7■□□□□ 0.1
AC078880.1-201ENST00000546696 PTPREP23469 700 aa15.69■□□□□ 0.1
AC078880.1-201ENST00000546696 PHF14O94880 888 aa15.68■□□□□ 0.1
AC078880.1-201ENST00000546696 ARIH1Q9Y4X5 557 aaPredicted RBP15.68■□□□□ 0.1
AC078880.1-201ENST00000546696 VPS9D1Q9Y2B5 631 aa15.67■□□□□ 0.1
AC078880.1-201ENST00000546696 PDIA6Q15084 440 aa15.66■□□□□ 0.1
AC078880.1-201ENST00000546696 FBXW7Q969H0 707 aa15.66■□□□□ 0.1
AC078880.1-201ENST00000546696 SPDYE16A6NNV3 312 aaPredicted RBP15.65■□□□□ 0.1
AC078880.1-201ENST00000546696 TYW1BQ6NUM6 668 aa15.65■□□□□ 0.1
AC078880.1-201ENST00000546696 PLCB2Q00722 1185 aa15.63■□□□□ 0.09
AC078880.1-201ENST00000546696 EPAS1Q99814 870 aa15.63■□□□□ 0.09
AC078880.1-201ENST00000546696 SLC4A5Q9BY07 1137 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms