RNA–Protein interactions for RNA: ENST00000546253.5

SLC3A2-222, Transcript of solute carrier family 3 member 2, humanhuman

TSL 4

Gene SLC3A2, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-222ENST00000546253 SIGLEC1Q9BZZ2 1709 aa25.14■■□□□ 1.61
SLC3A2-222ENST00000546253 DMRT2Q9Y5R5 561 aa25.13■■□□□ 1.61
SLC3A2-222ENST00000546253 ATP10AO60312 1499 aa25.11■■□□□ 1.61
SLC3A2-222ENST00000546253 C9orf84Q5VXU9 1444 aa25.11■■□□□ 1.61
SLC3A2-222ENST00000546253 ARHGEF12Q9NZN5 1544 aa25.1■■□□□ 1.61
SLC3A2-222ENST00000546253 PLCH2O75038 1416 aa25.1■■□□□ 1.61
SLC3A2-222ENST00000546253 EEA1Q15075 1411 aa25.1■■□□□ 1.61
SLC3A2-222ENST00000546253 PREX1Q8TCU6 1659 aa25.1■■□□□ 1.61
SLC3A2-222ENST00000546253 CDK13Q14004 1512 aaKnown RBP25.06■■□□□ 1.6
SLC3A2-222ENST00000546253 EFCAB2Q5VUJ9 269 aa25.05■■□□□ 1.6
SLC3A2-222ENST00000546253 UHRF1BP1Q6BDS2 1440 aa25.04■■□□□ 1.6
SLC3A2-222ENST00000546253 SOCS7O14512 581 aa25.03■■□□□ 1.6
SLC3A2-222ENST00000546253 CEBPAP49715 358 aaPredicted RBP25.03■■□□□ 1.6
SLC3A2-222ENST00000546253 ILDR2Q71H61 639 aa25■■□□□ 1.59
SLC3A2-222ENST00000546253 MYT1LQ9UL68 1186 aa25■■□□□ 1.59
SLC3A2-222ENST00000546253 ATP1B4Q9UN42 357 aaPredicted RBP25■■□□□ 1.59
SLC3A2-222ENST00000546253 ZNF518AQ6AHZ1 1483 aa24.99■■□□□ 1.59
SLC3A2-222ENST00000546253 CDK11AQ9UQ88 783 aaPredicted RBP24.99■■□□□ 1.59
SLC3A2-222ENST00000546253 MYO5CQ9NQX4 1742 aa24.97■■□□□ 1.59
SLC3A2-222ENST00000546253 ESF1Q9H501 851 aaKnown RBP24.94■■□□□ 1.58
SLC3A2-222ENST00000546253 STRCQ7RTU9 1775 aa24.93■■□□□ 1.58
SLC3A2-222ENST00000546253 FMN1Q68DA7 1419 aa24.92■■□□□ 1.58
SLC3A2-222ENST00000546253 SPATA31D1Q6ZQQ2 1576 aa24.92■■□□□ 1.58
SLC3A2-222ENST00000546253 ARHGAP5Q13017 1502 aa24.91■■□□□ 1.58
SLC3A2-222ENST00000546253 PTPRTO14522 1441 aa24.91■■□□□ 1.58
SLC3A2-222ENST00000546253 KIF14Q15058 1648 aa24.9■■□□□ 1.58
SLC3A2-222ENST00000546253 SETD1BQ9UPS6 1966 aaKnown RBP24.9■■□□□ 1.58
SLC3A2-222ENST00000546253 AFAP1Q8N556 730 aa24.89■■□□□ 1.58
SLC3A2-222ENST00000546253 KDM5CP41229 1560 aa24.88■■□□□ 1.57
SLC3A2-222ENST00000546253 CLIP1P30622 1438 aa24.88■■□□□ 1.57
SLC3A2-222ENST00000546253 DIP2CQ9Y2E4 1556 aa24.85■■□□□ 1.57
SLC3A2-222ENST00000546253 TROQ12816 1431 aaPredicted RBP24.85■■□□□ 1.57
SLC3A2-222ENST00000546253 REREQ9P2R6 1566 aa24.84■■□□□ 1.57
SLC3A2-222ENST00000546253 TRAPPC8Q9Y2L5 1435 aa24.81■■□□□ 1.56
SLC3A2-222ENST00000546253 IQSEC2Q5JU85 1478 aa24.81■■□□□ 1.56
SLC3A2-222ENST00000546253 UBTFP17480 764 aaKnown RBP24.8■■□□□ 1.56
SLC3A2-222ENST00000546253 MLH3Q9UHC1 1453 aa24.8■■□□□ 1.56
SLC3A2-222ENST00000546253 C3P01024 1663 aa24.8■■□□□ 1.56
SLC3A2-222ENST00000546253 ABCA6Q8N139 1617 aa24.79■■□□□ 1.56
SLC3A2-222ENST00000546253 AGLP35573 1532 aa24.78■■□□□ 1.56
SLC3A2-222ENST00000546253 CNTLNQ9NXG0 1405 aa24.78■■□□□ 1.56
SLC3A2-222ENST00000546253 NCOA1Q15788 1441 aa24.76■■□□□ 1.55
SLC3A2-222ENST00000546253 LTBP4Q8N2S1 1624 aa24.75■■□□□ 1.55
SLC3A2-222ENST00000546253 EHMT2Q96KQ7 1210 aa24.74■■□□□ 1.55
SLC3A2-222ENST00000546253 ARHGAP35Q9NRY4 1499 aa24.73■■□□□ 1.55
SLC3A2-222ENST00000546253 ABCC1P33527 1531 aa24.71■■□□□ 1.55
SLC3A2-222ENST00000546253 CDC42BPBQ9Y5S2 1711 aa24.68■■□□□ 1.54
SLC3A2-222ENST00000546253 NPATQ14207 1427 aa24.68■■□□□ 1.54
SLC3A2-222ENST00000546253 PREX2Q70Z35 1606 aa24.68■■□□□ 1.54
SLC3A2-222ENST00000546253 CAMSAP1Q5T5Y3 1602 aa24.67■■□□□ 1.54
SLC3A2-222ENST00000546253 ITSN2Q9NZM3 1697 aa24.66■■□□□ 1.54
SLC3A2-222ENST00000546253 UBAP1LF5GYI3 381 aa24.64■■□□□ 1.54
SLC3A2-222ENST00000546253 CCDC18Q5T9S5 1454 aa24.63■■□□□ 1.53
SLC3A2-222ENST00000546253 KIDINS220Q9ULH0 1771 aa24.62■■□□□ 1.53
SLC3A2-222ENST00000546253 MROH2AA6NES4 1674 aa24.61■■□□□ 1.53
SLC3A2-222ENST00000546253 ZMYM3Q14202 1370 aa24.6■■□□□ 1.53
SLC3A2-222ENST00000546253 NCKAP5LQ9HCH0 1330 aa24.6■■□□□ 1.53
SLC3A2-222ENST00000546253 ZNF335Q9H4Z2 1342 aaPredicted RBP24.59■■□□□ 1.53
SLC3A2-222ENST00000546253 LRRIQ1Q96JM4 1722 aa24.58■■□□□ 1.52
SLC3A2-222ENST00000546253 PKD2Q13563 968 aa24.57■■□□□ 1.52
SLC3A2-222ENST00000546253 ZNF777Q9ULD5 760 aaPredicted RBP24.57■■□□□ 1.52
SLC3A2-222ENST00000546253 SPAG9O60271 1321 aaKnown RBP24.57■■□□□ 1.52
SLC3A2-222ENST00000546253 SAMD9LQ8IVG5 1584 aa24.55■■□□□ 1.52
SLC3A2-222ENST00000546253 PLA2R1Q13018 1463 aa24.55■■□□□ 1.52
SLC3A2-222ENST00000546253 CASKIN1Q8WXD9 1431 aa24.54■■□□□ 1.52
SLC3A2-222ENST00000546253 CDC42BPAQ5VT25 1732 aa24.51■■□□□ 1.51
SLC3A2-222ENST00000546253 SYCP2Q9BX26 1530 aa24.51■■□□□ 1.51
SLC3A2-222ENST00000546253 MYO3AQ8NEV4 1616 aa24.5■■□□□ 1.51
SLC3A2-222ENST00000546253 ZNF142P52746 1687 aaPredicted RBP24.5■■□□□ 1.51
SLC3A2-222ENST00000546253 SUPT6HQ7KZ85 1726 aaKnown RBP24.49■■□□□ 1.51
SLC3A2-222ENST00000546253 PPP6R1Q9UPN7 881 aa24.49■■□□□ 1.51
SLC3A2-222ENST00000546253 CEP170BQ9Y4F5 1589 aaPredicted RBP24.49■■□□□ 1.51
SLC3A2-222ENST00000546253 CLTCQ00610 1675 aaKnown RBP24.47■■□□□ 1.51
SLC3A2-222ENST00000546253 ATP7AQ04656 1500 aa24.47■■□□□ 1.51
SLC3A2-222ENST00000546253 TCOF1Q13428 1488 aaKnown RBP24.47■■□□□ 1.51
SLC3A2-222ENST00000546253 PTPRKQ15262 1439 aa24.46■■□□□ 1.51
SLC3A2-222ENST00000546253 SCAF1Q9H7N4 1312 aaKnown RBP24.46■■□□□ 1.51
SLC3A2-222ENST00000546253 HNRNPMP52272 730 aaKnown RBP eCLIP24.46■■□□□ 1.511e-20■□□□□ 11
SLC3A2-222ENST00000546253 GGT6Q6P531 493 aa24.46■■□□□ 1.51
SLC3A2-222ENST00000546253 A2MP01023 1474 aa24.45■■□□□ 1.51
SLC3A2-222ENST00000546253 PLEKHH2Q8IVE3 1493 aa24.45■■□□□ 1.51
SLC3A2-222ENST00000546253 PLXNC1O60486 1568 aa24.43■■□□□ 1.5
SLC3A2-222ENST00000546253 FYCO1Q9BQS8 1478 aa24.43■■□□□ 1.5
SLC3A2-222ENST00000546253 KIAA1107Q9UPP5 1409 aa24.42■■□□□ 1.5
SLC3A2-222ENST00000546253 GPATCH8Q9UKJ3 1502 aaKnown RBP24.41■■□□□ 1.5
SLC3A2-222ENST00000546253 CFDP1Q9UEE9 299 aaPredicted RBP24.41■■□□□ 1.5
SLC3A2-222ENST00000546253 INO80Q9ULG1 1556 aaPredicted RBP24.4■■□□□ 1.5
SLC3A2-222ENST00000546253 TOM1O60784 492 aa24.39■■□□□ 1.49
SLC3A2-222ENST00000546253 PIP4K2BP78356 416 aa24.38■■□□□ 1.49
SLC3A2-222ENST00000546253 A2ML1A8K2U0 1454 aa24.38■■□□□ 1.49
SLC3A2-222ENST00000546253 CCNB3Q8WWL7 1395 aa24.37■■□□□ 1.49
SLC3A2-222ENST00000546253 HSPA1LP34931 641 aa24.36■■□□□ 1.49
SLC3A2-222ENST00000546253 MED1Q15648 1581 aaPredicted RBP24.35■■□□□ 1.49
SLC3A2-222ENST00000546253 CPS1P31327 1500 aa24.35■■□□□ 1.49
SLC3A2-222ENST00000546253 ADGBQ8N7X0 1667 aa24.32■■□□□ 1.48
SLC3A2-222ENST00000546253 DNMT1P26358 1616 aaKnown RBP24.31■■□□□ 1.48
SLC3A2-222ENST00000546253 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
SLC3A2-222ENST00000546253 TNRQ92752 1358 aa24.29■■□□□ 1.48
SLC3A2-222ENST00000546253 SHANK2Q9UPX8 1470 aa24.28■■□□□ 1.48
SLC3A2-222ENST00000546253 MTUS2Q5JR59 1369 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms