RNA–Protein interactions for RNA: ENST00000546231.6

ERC1-219, Transcript of ELKS/RAB6-interacting/CAST family member 1, humanhuman

TSL 5 BASIC

Gene ERC1, Length 4,390 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERC1-219ENST00000546231 NCOA2Q15596 1464 aa19.61■□□□□ 0.73
ERC1-219ENST00000546231 FANCIQ9NVI1 1328 aa19.61■□□□□ 0.73
ERC1-219ENST00000546231 DNMBPQ6XZF7 1577 aa19.61■□□□□ 0.73
ERC1-219ENST00000546231 PRKRIP1Q9H875 184 aaPredicted RBP19.6■□□□□ 0.73
ERC1-219ENST00000546231 MYOM3Q5VTT5 1437 aa19.6■□□□□ 0.73
ERC1-219ENST00000546231 STAG3Q9UJ98 1225 aa19.58■□□□□ 0.73
ERC1-219ENST00000546231 CC2D1BQ5T0F9 858 aaKnown RBP19.57■□□□□ 0.72
ERC1-219ENST00000546231 ABCA10Q8WWZ4 1543 aa19.57■□□□□ 0.72
ERC1-219ENST00000546231 HFM1A2PYH4 1435 aa19.56■□□□□ 0.72
ERC1-219ENST00000546231 WASHC2AQ641Q2 1341 aa19.56■□□□□ 0.72
ERC1-219ENST00000546231 EFCAB5A4FU69 1503 aa19.56■□□□□ 0.72
ERC1-219ENST00000546231 PRDM2Q13029 1718 aa19.56■□□□□ 0.72
ERC1-219ENST00000546231 ZNF608Q9ULD9 1512 aaPredicted RBP19.55■□□□□ 0.72
ERC1-219ENST00000546231 ZBED9Q6R2W3 1325 aa19.55■□□□□ 0.72
ERC1-219ENST00000546231 GRIN2BQ13224 1484 aa19.54■□□□□ 0.72
ERC1-219ENST00000546231 PTPRGP23470 1445 aa19.53■□□□□ 0.72
ERC1-219ENST00000546231 GGT6Q6P531 493 aa19.53■□□□□ 0.72
ERC1-219ENST00000546231 PCF11O94913 1555 aaKnown RBP19.52■□□□□ 0.72
ERC1-219ENST00000546231 CDK13Q14004 1512 aaKnown RBP19.52■□□□□ 0.72
ERC1-219ENST00000546231 PRG4Q92954 1404 aaPredicted RBP19.5■□□□□ 0.71
ERC1-219ENST00000546231 TNNT2P45379 298 aaPredicted RBP19.5■□□□□ 0.71
ERC1-219ENST00000546231 CNTLNQ9NXG0 1405 aa19.5■□□□□ 0.71
ERC1-219ENST00000546231 ANKRD30AQ9BXX3 1397 aa19.5■□□□□ 0.71
ERC1-219ENST00000546231 SNAPC4Q5SXM2 1469 aa19.5■□□□□ 0.71
ERC1-219ENST00000546231 MRC2Q9UBG0 1479 aa19.5■□□□□ 0.71
ERC1-219ENST00000546231 NUDCQ9Y266 331 aa19.49■□□□□ 0.71
ERC1-219ENST00000546231 DEKP35659 375 aaKnown RBP19.48■□□□□ 0.71
ERC1-219ENST00000546231 CCDC7Q96M83 1385 aa19.48■□□□□ 0.71
ERC1-219ENST00000546231 NUTM2DQ5VT03 806 aaPredicted RBP19.47■□□□□ 0.71
ERC1-219ENST00000546231 SAFB2Q14151 953 aaKnown RBP eCLIP19.47■□□□□ 0.71
ERC1-219ENST00000546231 MLECQ14165 292 aa19.45■□□□□ 0.7
ERC1-219ENST00000546231 NAIPQ13075 1403 aa19.44■□□□□ 0.7
ERC1-219ENST00000546231 KIF3BO15066 747 aa19.44■□□□□ 0.7
ERC1-219ENST00000546231 EFCAB2Q5VUJ9 269 aa19.44■□□□□ 0.7
ERC1-219ENST00000546231 ESF1Q9H501 851 aaKnown RBP19.44■□□□□ 0.7
ERC1-219ENST00000546231 ST20-MTHFSA0A0A6YYL1 179 aa19.43■□□□□ 0.7
ERC1-219ENST00000546231 CANXP27824 592 aaKnown RBP19.41■□□□□ 0.7
ERC1-219ENST00000546231 PLEKHG5O94827 1062 aa19.4■□□□□ 0.7
ERC1-219ENST00000546231 LAMC3Q9Y6N6 1575 aa19.4■□□□□ 0.7
ERC1-219ENST00000546231 KIF7Q2M1P5 1343 aa19.4■□□□□ 0.7
ERC1-219ENST00000546231 NEUROD2Q15784 382 aa19.39■□□□□ 0.7
ERC1-219ENST00000546231 WDR43Q15061 677 aaKnown RBP eCLIP19.39■□□□□ 0.69
ERC1-219ENST00000546231 NBPF8Q3BBV2 869 aa19.38■□□□□ 0.69
ERC1-219ENST00000546231 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.37■□□□□ 0.69
ERC1-219ENST00000546231 EHBP1L1Q8N3D4 1523 aa19.37■□□□□ 0.69
ERC1-219ENST00000546231 PLB1Q6P1J6 1458 aa19.36■□□□□ 0.69
ERC1-219ENST00000546231 ROCK2O75116 1388 aaKnown RBP19.36■□□□□ 0.69
ERC1-219ENST00000546231 AFAP1Q8N556 730 aa19.36■□□□□ 0.69
ERC1-219ENST00000546231 IPO9Q96P70 1041 aaKnown RBP19.36■□□□□ 0.69
ERC1-219ENST00000546231 CCDC184Q52MB2 194 aa19.35■□□□□ 0.69
ERC1-219ENST00000546231 DDRGK1Q96HY6 314 aa19.35■□□□□ 0.69
ERC1-219ENST00000546231 RALBP1Q15311 655 aa19.35■□□□□ 0.69
ERC1-219ENST00000546231 KNSTRNQ9Y448 316 aa19.35■□□□□ 0.69
ERC1-219ENST00000546231 SLC24A1O60721 1099 aa19.34■□□□□ 0.69
ERC1-219ENST00000546231 SPAG9O60271 1321 aaKnown RBP19.34■□□□□ 0.69
ERC1-219ENST00000546231 IFT140Q96RY7 1462 aa19.34■□□□□ 0.69
ERC1-219ENST00000546231 PTPRKQ15262 1439 aa19.33■□□□□ 0.68
ERC1-219ENST00000546231 EPRSP07814 1512 aaKnown RBP19.33■□□□□ 0.68
ERC1-219ENST00000546231 USP47Q96K76 1375 aa19.32■□□□□ 0.68
ERC1-219ENST00000546231 MSH5O43196 834 aa19.32■□□□□ 0.68
ERC1-219ENST00000546231 PPM1GO15355 546 aaPredicted RBP19.32■□□□□ 0.68
ERC1-219ENST00000546231 RCAN3Q9UKA8 241 aa19.32■□□□□ 0.68
ERC1-219ENST00000546231 STK26Q9P289 416 aa19.3■□□□□ 0.68
ERC1-219ENST00000546231 LAS1LQ9Y4W2 734 aaKnown RBP19.3■□□□□ 0.68
ERC1-219ENST00000546231 CYB5RLQ6IPT4 315 aa19.3■□□□□ 0.68
ERC1-219ENST00000546231 PTPN23Q9H3S7 1636 aa19.3■□□□□ 0.68
ERC1-219ENST00000546231 TCERG1O14776 1098 aaKnown RBP19.3■□□□□ 0.68
ERC1-219ENST00000546231 KIF15Q9NS87 1388 aa19.29■□□□□ 0.68
ERC1-219ENST00000546231 SUPT6HQ7KZ85 1726 aaKnown RBP19.29■□□□□ 0.68
ERC1-219ENST00000546231 NEFMP07197 916 aa19.29■□□□□ 0.68
ERC1-219ENST00000546231 ARID4BQ4LE39 1312 aaPredicted RBP19.28■□□□□ 0.68
ERC1-219ENST00000546231 KTN1Q86UP2 1357 aaKnown RBP19.28■□□□□ 0.68
ERC1-219ENST00000546231 MIA2Q96PC5 1412 aa19.27■□□□□ 0.68
ERC1-219ENST00000546231 ANKRD50Q9ULJ7 1429 aa19.26■□□□□ 0.67
ERC1-219ENST00000546231 CFAP43Q8NDM7 1665 aa19.26■□□□□ 0.67
ERC1-219ENST00000546231 IQGAP2Q13576 1575 aa19.26■□□□□ 0.67
ERC1-219ENST00000546231 CUL7Q14999 1698 aa19.25■□□□□ 0.67
ERC1-219ENST00000546231 TMF1P82094 1093 aa19.25■□□□□ 0.67
ERC1-219ENST00000546231 MYBBP1AQ9BQG0 1328 aaKnown RBP19.25■□□□□ 0.67
ERC1-219ENST00000546231 C11orf95C9JLR9 678 aaPredicted RBP19.25■□□□□ 0.67
ERC1-219ENST00000546231 NLRP13Q86W25 1043 aa19.24■□□□□ 0.67
ERC1-219ENST00000546231 KIAA0586Q9BVV6 1533 aa19.23■□□□□ 0.67
ERC1-219ENST00000546231 PDE3BQ13370 1112 aa19.23■□□□□ 0.67
ERC1-219ENST00000546231 NBPF1Q3BBV0 1214 aa19.22■□□□□ 0.67
ERC1-219ENST00000546231 CCDC144AA2RUR9 1427 aa19.19■□□□□ 0.66
ERC1-219ENST00000546231 TROQ12816 1431 aaPredicted RBP19.19■□□□□ 0.66
ERC1-219ENST00000546231 RRP1P56182 461 aaKnown RBP19.19■□□□□ 0.66
ERC1-219ENST00000546231 GRIN2AQ12879 1464 aa19.19■□□□□ 0.66
ERC1-219ENST00000546231 NCOA1Q15788 1441 aa19.19■□□□□ 0.66
ERC1-219ENST00000546231 ARHGEF11O15085 1522 aa19.18■□□□□ 0.66
ERC1-219ENST00000546231 TRAK1Q9UPV9 953 aa19.18■□□□□ 0.66
ERC1-219ENST00000546231 DAPK1P53355 1430 aa19.18■□□□□ 0.66
ERC1-219ENST00000546231 SMG6Q86US8 1419 aaKnown RBP19.17■□□□□ 0.66
ERC1-219ENST00000546231 THOC2Q8NI27 1593 aaKnown RBP19.17■□□□□ 0.66
ERC1-219ENST00000546231 AKNAQ7Z591 1439 aa19.17■□□□□ 0.66
ERC1-219ENST00000546231 CDCA8Q53HL2 280 aa19.17■□□□□ 0.66
ERC1-219ENST00000546231 EXOC6Q8TAG9 804 aa19.17■□□□□ 0.66
ERC1-219ENST00000546231 HECW1Q76N89 1606 aa19.16■□□□□ 0.66
ERC1-219ENST00000546231 ANKRD30BQ9BXX2 1392 aa19.16■□□□□ 0.66
ERC1-219ENST00000546231 PANK3Q9H999 370 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms