RNA–Protein interactions for RNA: ENST00000545870.1

PRKAB1-209, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 3

Gene PRKAB1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-209ENST00000545870 ITSN2Q9NZM3 1697 aa11.89□□□□□ -0.51
PRKAB1-209ENST00000545870 ABCC5O15440 1437 aa11.87□□□□□ -0.51
PRKAB1-209ENST00000545870 JPH4Q96JJ6 628 aa11.86□□□□□ -0.51
PRKAB1-209ENST00000545870 YTHDC1Q96MU7 727 aaKnown RBP11.86□□□□□ -0.51
PRKAB1-209ENST00000545870 ABCA8O94911 1581 aa11.86□□□□□ -0.51
PRKAB1-209ENST00000545870 ADGRL2O95490 1459 aa11.85□□□□□ -0.51
PRKAB1-209ENST00000545870 RRP7BPQ9NSQ0 103 aa11.84□□□□□ -0.51
PRKAB1-209ENST00000545870 KDM5BQ9UGL1 1544 aa11.84□□□□□ -0.51
PRKAB1-209ENST00000545870 PLB1Q6P1J6 1458 aa11.83□□□□□ -0.52
PRKAB1-209ENST00000545870 GPATCH8Q9UKJ3 1502 aaKnown RBP11.83□□□□□ -0.52
PRKAB1-209ENST00000545870 PRG4Q92954 1404 aaPredicted RBP11.83□□□□□ -0.52
PRKAB1-209ENST00000545870 DENND4BO75064 1496 aaPredicted RBP11.83□□□□□ -0.52
PRKAB1-209ENST00000545870 CAMSAP2Q08AD1 1489 aa11.83□□□□□ -0.52
PRKAB1-209ENST00000545870 ADGBQ8N7X0 1667 aa11.82□□□□□ -0.52
PRKAB1-209ENST00000545870 MPHOSPH9Q99550 1183 aa11.82□□□□□ -0.52
PRKAB1-209ENST00000545870 SHANK2Q9UPX8 1470 aa11.82□□□□□ -0.52
PRKAB1-209ENST00000545870 CHIC2Q9UKJ5 165 aa11.81□□□□□ -0.52
PRKAB1-209ENST00000545870 KDM6BO15054 1643 aa11.81□□□□□ -0.52
PRKAB1-209ENST00000545870 KIF14Q15058 1648 aa11.81□□□□□ -0.52
PRKAB1-209ENST00000545870 CCER2I3L3R5 266 aa11.8□□□□□ -0.52
PRKAB1-209ENST00000545870 TRIM52Q96A61 297 aa11.8□□□□□ -0.52
PRKAB1-209ENST00000545870 CFDP1Q9UEE9 299 aaPredicted RBP11.8□□□□□ -0.52
PRKAB1-209ENST00000545870 CROCC2H7BZ55 1655 aa11.79□□□□□ -0.52
PRKAB1-209ENST00000545870 ABCC10Q5T3U5 1492 aa11.79□□□□□ -0.52
PRKAB1-209ENST00000545870 FBLN2P98095 1184 aa11.79□□□□□ -0.52
PRKAB1-209ENST00000545870 ANKRD30BQ9BXX2 1392 aa11.79□□□□□ -0.52
PRKAB1-209ENST00000545870 NCOA1Q15788 1441 aa11.78□□□□□ -0.52
PRKAB1-209ENST00000545870 ATP10BO94823 1461 aa11.78□□□□□ -0.52
PRKAB1-209ENST00000545870 RPRD2Q5VT52 1461 aaKnown RBP11.78□□□□□ -0.52
PRKAB1-209ENST00000545870 PLEKHD1A6NEE1 506 aa11.78□□□□□ -0.52
PRKAB1-209ENST00000545870 ANKRD30AQ9BXX3 1397 aa11.78□□□□□ -0.52
PRKAB1-209ENST00000545870 ARID3CA6NKF2 412 aa11.77□□□□□ -0.53
PRKAB1-209ENST00000545870 PTPRGP23470 1445 aa11.76□□□□□ -0.53
PRKAB1-209ENST00000545870 KCNA4P22459 653 aa11.75□□□□□ -0.53
PRKAB1-209ENST00000545870 DDX10Q13206 875 aaKnown RBP11.75□□□□□ -0.53
PRKAB1-209ENST00000545870 NCBP3Q53F19 620 aaKnown RBP11.75□□□□□ -0.53
PRKAB1-209ENST00000545870 ZNF644Q9H582 1327 aaPredicted RBP11.75□□□□□ -0.53
PRKAB1-209ENST00000545870 ARHGEF5Q12774 1597 aa11.75□□□□□ -0.53
PRKAB1-209ENST00000545870 SHROOM2Q13796 1616 aa11.75□□□□□ -0.53
PRKAB1-209ENST00000545870 ANP32CO43423 234 aa11.73□□□□□ -0.53
PRKAB1-209ENST00000545870 PZPP20742 1482 aa11.73□□□□□ -0.53
PRKAB1-209ENST00000545870 CDC42BPAQ5VT25 1732 aa11.72□□□□□ -0.53
PRKAB1-209ENST00000545870 KDM5DQ9BY66 1539 aa11.72□□□□□ -0.53
PRKAB1-209ENST00000545870 TEX14Q8IWB6 1497 aa11.72□□□□□ -0.53
PRKAB1-209ENST00000545870 KIAA1107Q9UPP5 1409 aa11.72□□□□□ -0.53
PRKAB1-209ENST00000545870 RSPH4AQ5TD94 716 aa11.72□□□□□ -0.53
PRKAB1-209ENST00000545870 EIF4G2P78344 907 aaKnown RBP eCLIP11.71□□□□□ -0.53
PRKAB1-209ENST00000545870 SLC4A1APQ9BWU0 796 aaKnown RBP11.71□□□□□ -0.53
PRKAB1-209ENST00000545870 C9orf84Q5VXU9 1444 aa11.7□□□□□ -0.54
PRKAB1-209ENST00000545870 ANKRD50Q9ULJ7 1429 aa11.69□□□□□ -0.54
PRKAB1-209ENST00000545870 L3MBTL2Q969R5 705 aa11.69□□□□□ -0.54
PRKAB1-209ENST00000545870 CHD1O14646 1710 aa11.68□□□□□ -0.54
PRKAB1-209ENST00000545870 PREX2Q70Z35 1606 aa11.68□□□□□ -0.54
PRKAB1-209ENST00000545870 TSPY4P0CV99 314 aa11.67□□□□□ -0.54
PRKAB1-209ENST00000545870 TSPY10P0CW01 314 aa11.67□□□□□ -0.54
PRKAB1-209ENST00000545870 HSPA5P11021 654 aaKnown RBP11.67□□□□□ -0.54
PRKAB1-209ENST00000545870 CCDC141Q6ZP82 1450 aa11.67□□□□□ -0.54
PRKAB1-209ENST00000545870 PLEKHH2Q8IVE3 1493 aa11.67□□□□□ -0.54
PRKAB1-209ENST00000545870 MBD5Q9P267 1494 aa11.67□□□□□ -0.54
PRKAB1-209ENST00000545870 MAST1Q9Y2H9 1570 aa11.67□□□□□ -0.54
PRKAB1-209ENST00000545870 ABCC2Q92887 1545 aa11.66□□□□□ -0.54
PRKAB1-209ENST00000545870 ARHGEF12Q9NZN5 1544 aa11.65□□□□□ -0.54
PRKAB1-209ENST00000545870 UHRF1BP1LA0JNW5 1464 aa11.65□□□□□ -0.54
PRKAB1-209ENST00000545870 ZNF777Q9ULD5 760 aaPredicted RBP11.65□□□□□ -0.54
PRKAB1-209ENST00000545870 CNTLNQ9NXG0 1405 aa11.64□□□□□ -0.55
PRKAB1-209ENST00000545870 UHRF1BP1Q6BDS2 1440 aa11.63□□□□□ -0.55
PRKAB1-209ENST00000545870 SPATA31E1Q6ZUB1 1445 aa11.63□□□□□ -0.55
PRKAB1-209ENST00000545870 KIF15Q9NS87 1388 aa11.63□□□□□ -0.55
PRKAB1-209ENST00000545870 SAMD9LQ8IVG5 1584 aa11.62□□□□□ -0.55
PRKAB1-209ENST00000545870 WASHC2AQ641Q2 1341 aa11.62□□□□□ -0.55
PRKAB1-209ENST00000545870 CLASP1Q7Z460 1538 aa11.62□□□□□ -0.55
PRKAB1-209ENST00000545870 HIRIP3Q9BW71 556 aaPredicted RBP11.62□□□□□ -0.55
PRKAB1-209ENST00000545870 CCDC7Q96M83 1385 aa11.62□□□□□ -0.55
PRKAB1-209ENST00000545870 ARID4BQ4LE39 1312 aaPredicted RBP11.61□□□□□ -0.55
PRKAB1-209ENST00000545870 PKD2Q13563 968 aa11.61□□□□□ -0.55
PRKAB1-209ENST00000545870 CNKSR2Q8WXI2 1034 aa11.61□□□□□ -0.55
PRKAB1-209ENST00000545870 NUP155O75694 1391 aa11.61□□□□□ -0.55
PRKAB1-209ENST00000545870 PLXNC1O60486 1568 aa11.6□□□□□ -0.55
PRKAB1-209ENST00000545870 CDC42BPBQ9Y5S2 1711 aa11.6□□□□□ -0.55
PRKAB1-209ENST00000545870 NBPF8Q3BBV2 869 aa11.59□□□□□ -0.55
PRKAB1-209ENST00000545870 KCNH8Q96L42 1107 aa11.59□□□□□ -0.55
PRKAB1-209ENST00000545870 SUPT16HQ9Y5B9 1047 aaKnown RBP11.59□□□□□ -0.55
PRKAB1-209ENST00000545870 POLR1AO95602 1720 aaPredicted RBP11.59□□□□□ -0.55
PRKAB1-209ENST00000545870 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.59□□□□□ -0.55
PRKAB1-209ENST00000545870 RALGAPBQ86X10 1494 aa11.58□□□□□ -0.56
PRKAB1-209ENST00000545870 MAPK8IP2Q13387 824 aaPredicted RBP11.58□□□□□ -0.56
PRKAB1-209ENST00000545870 ARHGAP5Q13017 1502 aa11.58□□□□□ -0.56
PRKAB1-209ENST00000545870 ARAP3Q8WWN8 1544 aa11.58□□□□□ -0.56
PRKAB1-209ENST00000545870 UNC13BO14795 1591 aa11.58□□□□□ -0.56
PRKAB1-209ENST00000545870 TTC37Q6PGP7 1564 aa11.58□□□□□ -0.56
PRKAB1-209ENST00000545870 MYO5CQ9NQX4 1742 aa11.57□□□□□ -0.56
PRKAB1-209ENST00000545870 HNRNPMP52272 730 aaKnown RBP eCLIP11.56□□□□□ -0.56
PRKAB1-209ENST00000545870 SYCP2Q9BX26 1530 aa11.55□□□□□ -0.56
PRKAB1-209ENST00000545870 FAM135AQ9P2D6 1515 aa11.55□□□□□ -0.56
PRKAB1-209ENST00000545870 PLCH2O75038 1416 aa11.55□□□□□ -0.56
PRKAB1-209ENST00000545870 DUOX2Q9NRD8 1548 aa11.55□□□□□ -0.56
PRKAB1-209ENST00000545870 ROCK2O75116 1388 aaKnown RBP11.54□□□□□ -0.56
PRKAB1-209ENST00000545870 ERBINQ96RT1 1412 aa11.54□□□□□ -0.56
PRKAB1-209ENST00000545870 MAGI2Q86UL8 1455 aa11.53□□□□□ -0.56
PRKAB1-209ENST00000545870 KIF7Q2M1P5 1343 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms