RNA–Protein interactions for RNA: ENST00000545377.5

ARHGEF28-214, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGEF28, Length 6,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-214ENST00000545377 KIF27Q86VH2 1401 aa22.14■■□□□ 1.13
ARHGEF28-214ENST00000545377 GORABQ5T7V8 394 aa22.14■■□□□ 1.13
ARHGEF28-214ENST00000545377 GOLGA3Q08378 1498 aa22.13■■□□□ 1.13
ARHGEF28-214ENST00000545377 MSH5O43196 834 aa22.12■■□□□ 1.13
ARHGEF28-214ENST00000545377 SPRYD3Q8NCJ5 442 aa22.12■■□□□ 1.13
ARHGEF28-214ENST00000545377 PDE4CQ08493 712 aa22.1■■□□□ 1.13
ARHGEF28-214ENST00000545377 NUTM2DQ5VT03 806 aaPredicted RBP22.09■■□□□ 1.13
ARHGEF28-214ENST00000545377 DRC7Q8IY82 874 aa22.09■■□□□ 1.13
ARHGEF28-214ENST00000545377 GTF2E1P29083 439 aaPredicted RBP22.09■■□□□ 1.13
ARHGEF28-214ENST00000545377 KIAA1211Q6ZU35 1233 aa22.07■■□□□ 1.12
ARHGEF28-214ENST00000545377 NUTM2FA1L443 756 aa22.07■■□□□ 1.12
ARHGEF28-214ENST00000545377 EID1Q9Y6B2 187 aa22.06■■□□□ 1.12
ARHGEF28-214ENST00000545377 LTV1Q96GA3 475 aaPredicted RBP22.05■■□□□ 1.12
ARHGEF28-214ENST00000545377 ERICH6BQ5W0A0 696 aa22.05■■□□□ 1.12
ARHGEF28-214ENST00000545377 HSCBQ8IWL3 235 aa22.05■■□□□ 1.12
ARHGEF28-214ENST00000545377 FRAT2O75474 233 aaPredicted RBP22.04■■□□□ 1.12
ARHGEF28-214ENST00000545377 WRNQ14191 1432 aaPredicted RBP eCLIP22.04■■□□□ 1.12
ARHGEF28-214ENST00000545377 CEP162Q5TB80 1403 aa22.04■■□□□ 1.12
ARHGEF28-214ENST00000545377 NGDNQ8NEJ9 315 aaKnown RBP22.03■■□□□ 1.12
ARHGEF28-214ENST00000545377 KIAA2012Q0VF49 1180 aa22.03■■□□□ 1.12
ARHGEF28-214ENST00000545377 VPS53Q5VIR6 699 aa22.02■■□□□ 1.11
ARHGEF28-214ENST00000545377 U2AF1L5P0DN76 240 aaPredicted RBP22.01■■□□□ 1.11
ARHGEF28-214ENST00000545377 U2AF1Q01081 240 aaKnown RBP eCLIP22.01■■□□□ 1.117e-6■■■□□ 19.2
ARHGEF28-214ENST00000545377 MEX3CQ5U5Q3 659 aaKnown RBP22■■□□□ 1.11
ARHGEF28-214ENST00000545377 ANO8Q9HCE9 1232 aaPredicted RBP22■■□□□ 1.11
ARHGEF28-214ENST00000545377 NAP1L5Q96NT1 182 aaPredicted RBP22■■□□□ 1.11
ARHGEF28-214ENST00000545377 B4GALNT3Q6L9W6 998 aa21.98■■□□□ 1.11
ARHGEF28-214ENST00000545377 DCAF1Q9Y4B6 1507 aa21.98■■□□□ 1.11
ARHGEF28-214ENST00000545377 PHF23Q9BUL5 403 aaPredicted RBP21.97■■□□□ 1.11
ARHGEF28-214ENST00000545377 KLHL34Q8N239 644 aa21.97■■□□□ 1.11
ARHGEF28-214ENST00000545377 NOC3LQ8WTT2 800 aaKnown RBP21.96■■□□□ 1.11
ARHGEF28-214ENST00000545377 CHAF1AQ13111 956 aaPredicted RBP21.95■■□□□ 1.11
ARHGEF28-214ENST00000545377 HSP90B1P14625 803 aaKnown RBP21.95■■□□□ 1.1
ARHGEF28-214ENST00000545377 SPAG9O60271 1321 aaKnown RBP21.95■■□□□ 1.1
ARHGEF28-214ENST00000545377 EVA1CP58658 441 aa21.95■■□□□ 1.1
ARHGEF28-214ENST00000545377 TOMM22Q9NS69 142 aa21.95■■□□□ 1.1
ARHGEF28-214ENST00000545377 STK31Q9BXU1 1019 aa21.94■■□□□ 1.1
ARHGEF28-214ENST00000545377 FOXD1Q16676 465 aa21.94■■□□□ 1.1
ARHGEF28-214ENST00000545377 ITPRIPQ8IWB1 547 aa21.94■■□□□ 1.1
ARHGEF28-214ENST00000545377 RASSF8Q8NHQ8 419 aa21.94■■□□□ 1.1
ARHGEF28-214ENST00000545377 AMPHP49418 695 aa21.93■■□□□ 1.1
ARHGEF28-214ENST00000545377 PKD2Q13563 968 aa21.92■■□□□ 1.1
ARHGEF28-214ENST00000545377 IPO8O15397 1037 aaKnown RBP21.92■■□□□ 1.1
ARHGEF28-214ENST00000545377 L1TD1Q5T7N2 865 aaKnown RBP21.91■■□□□ 1.1
ARHGEF28-214ENST00000545377 SLC4A10Q6U841 1118 aa21.91■■□□□ 1.1
ARHGEF28-214ENST00000545377 KIF3BO15066 747 aa21.9■■□□□ 1.1
ARHGEF28-214ENST00000545377 KRI1Q8N9T8 703 aaKnown RBP21.9■■□□□ 1.1
ARHGEF28-214ENST00000545377 CREBRFQ8IUR6 639 aa21.9■■□□□ 1.1
ARHGEF28-214ENST00000545377 CALD1Q05682 793 aaKnown RBP21.89■■□□□ 1.1
ARHGEF28-214ENST00000545377 MARCH6O60337 910 aa21.89■■□□□ 1.09
ARHGEF28-214ENST00000545377 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.88■■□□□ 1.091e-6■■■□□ 17.8
ARHGEF28-214ENST00000545377 PPP4R2Q9NY27 417 aa21.87■■□□□ 1.09
ARHGEF28-214ENST00000545377 TRIM6-TRIM34B2RNG4 842 aa21.87■■□□□ 1.09
ARHGEF28-214ENST00000545377 EEA1Q15075 1411 aa21.87■■□□□ 1.09
ARHGEF28-214ENST00000545377 GPATCH3Q96I76 525 aa21.87■■□□□ 1.09
ARHGEF28-214ENST00000545377 RTN4Q9NQC3 1192 aaKnown RBP21.87■■□□□ 1.09
ARHGEF28-214ENST00000545377 EFCAB2Q5VUJ9 269 aa21.86■■□□□ 1.09
ARHGEF28-214ENST00000545377 RAD21O60216 631 aa21.85■■□□□ 1.09
ARHGEF28-214ENST00000545377 WASHC2CQ9Y4E1 1318 aa21.85■■□□□ 1.09
ARHGEF28-214ENST00000545377 CARMIL2Q6F5E8 1435 aa21.84■■□□□ 1.09
ARHGEF28-214ENST00000545377 CUX2O14529 1486 aa21.83■■□□□ 1.09
ARHGEF28-214ENST00000545377 ROCK2O75116 1388 aaKnown RBP21.83■■□□□ 1.09
ARHGEF28-214ENST00000545377 CARMIL1Q5VZK9 1371 aa21.83■■□□□ 1.08
ARHGEF28-214ENST00000545377 WWC1Q8IX03 1113 aa21.83■■□□□ 1.08
ARHGEF28-214ENST00000545377 CEP164Q9UPV0 1460 aa21.82■■□□□ 1.08
ARHGEF28-214ENST00000545377 CFAP44Q96MT7 982 aa21.81■■□□□ 1.08
ARHGEF28-214ENST00000545377 KTN1Q86UP2 1357 aaKnown RBP21.81■■□□□ 1.08
ARHGEF28-214ENST00000545377 FBXW7Q969H0 707 aa21.8■■□□□ 1.08
ARHGEF28-214ENST00000545377 SYTL4Q96C24 671 aaPredicted RBP21.79■■□□□ 1.08
ARHGEF28-214ENST00000545377 TERF2IPQ9NYB0 399 aa21.79■■□□□ 1.08
ARHGEF28-214ENST00000545377 NOL8Q76FK4 1167 aaKnown RBP21.79■■□□□ 1.08
ARHGEF28-214ENST00000545377 CHMP4AQ9BY43 222 aa21.78■■□□□ 1.08
ARHGEF28-214ENST00000545377 FHAD1B1AJZ9 1412 aa21.78■■□□□ 1.08
ARHGEF28-214ENST00000545377 MSNP26038 577 aaKnown RBP21.77■■□□□ 1.08
ARHGEF28-214ENST00000545377 CTDP1Q9Y5B0 961 aaPredicted RBP21.77■■□□□ 1.08
ARHGEF28-214ENST00000545377 NGEFQ8N5V2 710 aa21.77■■□□□ 1.08
ARHGEF28-214ENST00000545377 TRIM34Q9BYJ4 488 aa21.77■■□□□ 1.07
ARHGEF28-214ENST00000545377 HSPA5P11021 654 aaKnown RBP21.76■■□□□ 1.07
ARHGEF28-214ENST00000545377 HNRNPMP52272 730 aaKnown RBP eCLIP21.75■■□□□ 1.072e-6■■■□□ 18.2
ARHGEF28-214ENST00000545377 HTATSF1O43719 755 aaKnown RBP21.75■■□□□ 1.07
ARHGEF28-214ENST00000545377 SMC4Q9NTJ3 1288 aa21.74■■□□□ 1.07
ARHGEF28-214ENST00000545377 NUP155O75694 1391 aa21.74■■□□□ 1.07
ARHGEF28-214ENST00000545377 A0A0U1RQG5 324 aaPredicted RBP21.74■■□□□ 1.07
ARHGEF28-214ENST00000545377 CWC22Q9HCG8 908 aaKnown RBP21.74■■□□□ 1.07
ARHGEF28-214ENST00000545377 NOP58Q9Y2X3 529 aaKnown RBP21.73■■□□□ 1.07
ARHGEF28-214ENST00000545377 CYB5RLQ6IPT4 315 aa21.73■■□□□ 1.07
ARHGEF28-214ENST00000545377 CEP89Q96ST8 783 aa21.72■■□□□ 1.07
ARHGEF28-214ENST00000545377 DCAF8L1A6NGE4 600 aa21.72■■□□□ 1.07
ARHGEF28-214ENST00000545377 CCDC146Q8IYE0 955 aa21.72■■□□□ 1.07
ARHGEF28-214ENST00000545377 CNKSR2Q8WXI2 1034 aa21.72■■□□□ 1.07
ARHGEF28-214ENST00000545377 C1orf141Q5JVX7 400 aa21.72■■□□□ 1.07
ARHGEF28-214ENST00000545377 HDAC5Q9UQL6 1122 aa21.72■■□□□ 1.07
ARHGEF28-214ENST00000545377 TCEAL9Q9UHQ7 104 aa21.72■■□□□ 1.07
ARHGEF28-214ENST00000545377 TPM4P67936 248 aa21.71■■□□□ 1.07
ARHGEF28-214ENST00000545377 RWDD1Q9H446 243 aaPredicted RBP21.7■■□□□ 1.06
ARHGEF28-214ENST00000545377 CCDC34Q96HJ3 373 aa21.7■■□□□ 1.06
ARHGEF28-214ENST00000545377 EIF3AQ14152 1382 aaKnown RBP21.7■■□□□ 1.06
ARHGEF28-214ENST00000545377 HMMRO75330 724 aa21.69■■□□□ 1.06
ARHGEF28-214ENST00000545377 TRAK1Q9UPV9 953 aa21.69■■□□□ 1.06
ARHGEF28-214ENST00000545377 TNIKQ9UKE5 1360 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms