RNA–Protein interactions for RNA: ENST00000545180.5

SPHK1-203, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SPHK1, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-203ENST00000545180 ITSN2Q9NZM3 1697 aa29.02■■■□□ 2.24
SPHK1-203ENST00000545180 GPATCH8Q9UKJ3 1502 aaKnown RBP29.02■■■□□ 2.24
SPHK1-203ENST00000545180 TRIM52Q96A61 297 aa29■■■□□ 2.23
SPHK1-203ENST00000545180 CFDP1Q9UEE9 299 aaPredicted RBP29■■■□□ 2.23
SPHK1-203ENST00000545180 ATP10BO94823 1461 aa28.99■■■□□ 2.23
SPHK1-203ENST00000545180 CHD1O14646 1710 aa28.99■■■□□ 2.23
SPHK1-203ENST00000545180 YTHDC1Q96MU7 727 aaKnown RBP28.98■■■□□ 2.23
SPHK1-203ENST00000545180 DENND4BO75064 1496 aaPredicted RBP28.98■■■□□ 2.23
SPHK1-203ENST00000545180 CAMSAP2Q08AD1 1489 aa28.98■■■□□ 2.23
SPHK1-203ENST00000545180 PLEKHD1A6NEE1 506 aa28.97■■■□□ 2.23
SPHK1-203ENST00000545180 PTPRGP23470 1445 aa28.95■■■□□ 2.23
SPHK1-203ENST00000545180 MPHOSPH9Q99550 1183 aa28.92■■■□□ 2.22
SPHK1-203ENST00000545180 ABCC10Q5T3U5 1492 aa28.89■■■□□ 2.22
SPHK1-203ENST00000545180 SHROOM2Q13796 1616 aa28.87■■■□□ 2.21
SPHK1-203ENST00000545180 ZNF777Q9ULD5 760 aaPredicted RBP28.86■■■□□ 2.21
SPHK1-203ENST00000545180 KDM5BQ9UGL1 1544 aa28.86■■■□□ 2.21
SPHK1-203ENST00000545180 NCOA1Q15788 1441 aa28.83■■■□□ 2.21
SPHK1-203ENST00000545180 CDC42BPAQ5VT25 1732 aa28.83■■■□□ 2.21
SPHK1-203ENST00000545180 ADGBQ8N7X0 1667 aa28.82■■■□□ 2.2
SPHK1-203ENST00000545180 ADGRL2O95490 1459 aa28.82■■■□□ 2.2
SPHK1-203ENST00000545180 CROCC2H7BZ55 1655 aa28.81■■■□□ 2.2
SPHK1-203ENST00000545180 GTF3C3Q9Y5Q9 886 aa28.78■■■□□ 2.2
SPHK1-203ENST00000545180 DDX10Q13206 875 aaKnown RBP28.74■■■□□ 2.19
SPHK1-203ENST00000545180 FOXD1Q16676 465 aa28.74■■■□□ 2.19
SPHK1-203ENST00000545180 ANKRD30BQ9BXX2 1392 aa28.74■■■□□ 2.19
SPHK1-203ENST00000545180 ANKRD30AQ9BXX3 1397 aa28.74■■■□□ 2.19
SPHK1-203ENST00000545180 HIRIP3Q9BW71 556 aaPredicted RBP28.74■■■□□ 2.19
SPHK1-203ENST00000545180 SLC4A1APQ9BWU0 796 aaKnown RBP28.71■■■□□ 2.19
SPHK1-203ENST00000545180 SHANK2Q9UPX8 1470 aa28.7■■■□□ 2.19
SPHK1-203ENST00000545180 ERCC6L2Q5T890 1561 aa28.69■■■□□ 2.18
SPHK1-203ENST00000545180 PZPP20742 1482 aa28.68■■■□□ 2.18
SPHK1-203ENST00000545180 RPRD2Q5VT52 1461 aaKnown RBP28.67■■■□□ 2.18
SPHK1-203ENST00000545180 C9orf84Q5VXU9 1444 aa28.66■■■□□ 2.18
SPHK1-203ENST00000545180 L3MBTL2Q969R5 705 aa28.65■■■□□ 2.18
SPHK1-203ENST00000545180 ABCC2Q92887 1545 aa28.65■■■□□ 2.18
SPHK1-203ENST00000545180 CLASP1Q7Z460 1538 aa28.64■■■□□ 2.17
SPHK1-203ENST00000545180 ANKRD50Q9ULJ7 1429 aa28.64■■■□□ 2.17
SPHK1-203ENST00000545180 ARHGEF5Q12774 1597 aa28.63■■■□□ 2.17
SPHK1-203ENST00000545180 PREX2Q70Z35 1606 aa28.61■■■□□ 2.17
SPHK1-203ENST00000545180 TSPY4P0CV99 314 aa28.61■■■□□ 2.17
SPHK1-203ENST00000545180 TSPY10P0CW01 314 aa28.61■■■□□ 2.17
SPHK1-203ENST00000545180 MBD5Q9P267 1494 aa28.6■■■□□ 2.17
SPHK1-203ENST00000545180 CDC42BPBQ9Y5S2 1711 aa28.59■■■□□ 2.17
SPHK1-203ENST00000545180 HNRNPMP52272 730 aaKnown RBP eCLIP28.59■■■□□ 2.17
SPHK1-203ENST00000545180 SAMD9LQ8IVG5 1584 aa28.57■■■□□ 2.16
SPHK1-203ENST00000545180 TEX14Q8IWB6 1497 aa28.57■■■□□ 2.16
SPHK1-203ENST00000545180 KIAA1107Q9UPP5 1409 aa28.55■■■□□ 2.16
SPHK1-203ENST00000545180 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.53■■■□□ 2.16
SPHK1-203ENST00000545180 CCDC141Q6ZP82 1450 aa28.53■■■□□ 2.16
SPHK1-203ENST00000545180 RSPH4AQ5TD94 716 aa28.53■■■□□ 2.16
SPHK1-203ENST00000545180 TTC37Q6PGP7 1564 aa28.52■■■□□ 2.16
SPHK1-203ENST00000545180 HSPA5P11021 654 aaKnown RBP28.51■■■□□ 2.15
SPHK1-203ENST00000545180 KIF15Q9NS87 1388 aa28.5■■■□□ 2.15
SPHK1-203ENST00000545180 PKD2Q13563 968 aa28.5■■■□□ 2.15
SPHK1-203ENST00000545180 UHRF1BP1LA0JNW5 1464 aa28.49■■■□□ 2.15
SPHK1-203ENST00000545180 KCNH8Q96L42 1107 aa28.49■■■□□ 2.15
SPHK1-203ENST00000545180 EIF4G2P78344 907 aaKnown RBP eCLIP28.49■■■□□ 2.15
SPHK1-203ENST00000545180 NUP155O75694 1391 aa28.47■■■□□ 2.15
SPHK1-203ENST00000545180 ARHGAP5Q13017 1502 aa28.47■■■□□ 2.15
SPHK1-203ENST00000545180 KDM5DQ9BY66 1539 aa28.46■■■□□ 2.15
SPHK1-203ENST00000545180 NBPF8Q3BBV2 869 aa28.45■■■□□ 2.15
SPHK1-203ENST00000545180 ANP32CO43423 234 aa28.45■■■□□ 2.14
SPHK1-203ENST00000545180 SYCP2Q9BX26 1530 aa28.43■■■□□ 2.14
SPHK1-203ENST00000545180 ZCCHC11Q5TAX3 1644 aaKnown RBP28.43■■■□□ 2.14
SPHK1-203ENST00000545180 MYO5CQ9NQX4 1742 aa28.42■■■□□ 2.14
SPHK1-203ENST00000545180 CCER2I3L3R5 266 aa28.41■■■□□ 2.14
SPHK1-203ENST00000545180 MAST1Q9Y2H9 1570 aa28.39■■■□□ 2.14
SPHK1-203ENST00000545180 PLEKHH2Q8IVE3 1493 aa28.39■■■□□ 2.14
SPHK1-203ENST00000545180 WASHC2AQ641Q2 1341 aa28.39■■■□□ 2.13
SPHK1-203ENST00000545180 PLCH2O75038 1416 aa28.34■■■□□ 2.13
SPHK1-203ENST00000545180 SPATA31E1Q6ZUB1 1445 aa28.3■■■□□ 2.12
SPHK1-203ENST00000545180 ARHGEF12Q9NZN5 1544 aa28.28■■■□□ 2.12
SPHK1-203ENST00000545180 PLXNC1O60486 1568 aa28.28■■■□□ 2.12
SPHK1-203ENST00000545180 EFCAB2Q5VUJ9 269 aa28.27■■■□□ 2.12
SPHK1-203ENST00000545180 FAM135AQ9P2D6 1515 aa28.27■■■□□ 2.12
SPHK1-203ENST00000545180 CCDC7Q96M83 1385 aa28.25■■■□□ 2.11
SPHK1-203ENST00000545180 C11orf95C9JLR9 678 aaPredicted RBP28.24■■■□□ 2.11
SPHK1-203ENST00000545180 UNC13BO14795 1591 aa28.23■■■□□ 2.11
SPHK1-203ENST00000545180 UHRF1BP1Q6BDS2 1440 aa28.21■■■□□ 2.11
SPHK1-203ENST00000545180 CNTLNQ9NXG0 1405 aa28.21■■■□□ 2.11
SPHK1-203ENST00000545180 ABCC1P33527 1531 aa28.2■■■□□ 2.11
SPHK1-203ENST00000545180 DUOX2Q9NRD8 1548 aa28.19■■■□□ 2.1
SPHK1-203ENST00000545180 ARAP3Q8WWN8 1544 aa28.18■■■□□ 2.1
SPHK1-203ENST00000545180 ZNF326Q5BKZ1 582 aaKnown RBP28.17■■■□□ 2.1
SPHK1-203ENST00000545180 WDR7Q9Y4E6 1490 aa28.15■■■□□ 2.1
SPHK1-203ENST00000545180 ERBINQ96RT1 1412 aa28.14■■■□□ 2.1
SPHK1-203ENST00000545180 TRAPPC8Q9Y2L5 1435 aa28.14■■■□□ 2.09
SPHK1-203ENST00000545180 POLR1AO95602 1720 aaPredicted RBP28.14■■■□□ 2.09
SPHK1-203ENST00000545180 KIF7Q2M1P5 1343 aa28.13■■■□□ 2.09
SPHK1-203ENST00000545180 RALGAPBQ86X10 1494 aa28.13■■■□□ 2.09
SPHK1-203ENST00000545180 USP47Q96K76 1375 aa28.12■■■□□ 2.09
SPHK1-203ENST00000545180 IQGAP3Q86VI3 1631 aa28.12■■■□□ 2.09
SPHK1-203ENST00000545180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.11■■■□□ 2.092e-7■■■□□ 16.3
SPHK1-203ENST00000545180 MAGI2Q86UL8 1455 aa28.1■■■□□ 2.09
SPHK1-203ENST00000545180 CCDC144AA2RUR9 1427 aa28.08■■■□□ 2.09
SPHK1-203ENST00000545180 KDM5CP41229 1560 aa28.08■■■□□ 2.09
SPHK1-203ENST00000545180 PLA2R1Q13018 1463 aa28.07■■■□□ 2.08
SPHK1-203ENST00000545180 DCAF11Q8TEB1 546 aa28.06■■■□□ 2.08
SPHK1-203ENST00000545180 RTEL1-TNFRSF6BF6WH68 1400 aa28.05■■■□□ 2.08
SPHK1-203ENST00000545180 KDM2AQ9Y2K7 1162 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms