RNA–Protein interactions for RNA: ENST00000542815.7

ZEB1-208, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,217 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-208ENST00000542815 DIP2CQ9Y2E4 1556 aa8.53□□□□□ -1.04
ZEB1-208ENST00000542815 ABCC1P33527 1531 aa8.52□□□□□ -1.04
ZEB1-208ENST00000542815 PLXNC1O60486 1568 aa8.52□□□□□ -1.05
ZEB1-208ENST00000542815 FMN1Q68DA7 1419 aa8.52□□□□□ -1.05
ZEB1-208ENST00000542815 AKNAQ7Z591 1439 aa8.51□□□□□ -1.05
ZEB1-208ENST00000542815 MLH3Q9UHC1 1453 aa8.51□□□□□ -1.05
ZEB1-208ENST00000542815 INO80Q9ULG1 1556 aaPredicted RBP8.51□□□□□ -1.05
ZEB1-208ENST00000542815 ABCA6Q8N139 1617 aa8.51□□□□□ -1.05
ZEB1-208ENST00000542815 STRCQ7RTU9 1775 aa8.5□□□□□ -1.05
ZEB1-208ENST00000542815 C3P01024 1663 aa8.5□□□□□ -1.05
ZEB1-208ENST00000542815 ADGBQ8N7X0 1667 aa8.5□□□□□ -1.05
ZEB1-208ENST00000542815 KIDINS220Q9ULH0 1771 aa8.49□□□□□ -1.05
ZEB1-208ENST00000542815 C9orf84Q5VXU9 1444 aa8.49□□□□□ -1.05
ZEB1-208ENST00000542815 ARHGAP35Q9NRY4 1499 aa8.49□□□□□ -1.05
ZEB1-208ENST00000542815 ZNF518AQ6AHZ1 1483 aa8.48□□□□□ -1.05
ZEB1-208ENST00000542815 FYCO1Q9BQS8 1478 aa8.48□□□□□ -1.05
ZEB1-208ENST00000542815 ATP10AO60312 1499 aa8.48□□□□□ -1.05
ZEB1-208ENST00000542815 CSRNP3Q8WYN3 585 aa8.48□□□□□ -1.05
ZEB1-208ENST00000542815 TROQ12816 1431 aaPredicted RBP8.47□□□□□ -1.05
ZEB1-208ENST00000542815 CASKIN1Q8WXD9 1431 aa8.47□□□□□ -1.05
ZEB1-208ENST00000542815 SETD1BQ9UPS6 1966 aaKnown RBP8.46□□□□□ -1.06
ZEB1-208ENST00000542815 CDK13Q14004 1512 aaKnown RBP8.44□□□□□ -1.06
ZEB1-208ENST00000542815 FAM9AQ8IZU1 332 aaPredicted RBP8.43□□□□□ -1.06
ZEB1-208ENST00000542815 SAMD9LQ8IVG5 1584 aa8.43□□□□□ -1.06
ZEB1-208ENST00000542815 NPATQ14207 1427 aa8.43□□□□□ -1.06
ZEB1-208ENST00000542815 PTPRTO14522 1441 aa8.43□□□□□ -1.06
ZEB1-208ENST00000542815 MAST1Q9Y2H9 1570 aa8.42□□□□□ -1.06
ZEB1-208ENST00000542815 ZC3H13Q5T200 1668 aaKnown RBP8.42□□□□□ -1.06
ZEB1-208ENST00000542815 PLEKHH2Q8IVE3 1493 aa8.42□□□□□ -1.06
ZEB1-208ENST00000542815 CNTLNQ9NXG0 1405 aa8.42□□□□□ -1.06
ZEB1-208ENST00000542815 KIAA1107Q9UPP5 1409 aa8.42□□□□□ -1.06
ZEB1-208ENST00000542815 EIF2AK4Q9P2K8 1649 aaKnown RBP8.41□□□□□ -1.06
ZEB1-208ENST00000542815 TTBK1Q5TCY1 1321 aaPredicted RBP8.41□□□□□ -1.06
ZEB1-208ENST00000542815 CLIP1P30622 1438 aa8.4□□□□□ -1.06
ZEB1-208ENST00000542815 RNF17Q9BXT8 1623 aaKnown RBP8.4□□□□□ -1.06
ZEB1-208ENST00000542815 KDM5AP29375 1690 aaKnown RBP8.4□□□□□ -1.06
ZEB1-208ENST00000542815 MYO3AQ8NEV4 1616 aa8.4□□□□□ -1.06
ZEB1-208ENST00000542815 POLR1AO95602 1720 aaPredicted RBP8.4□□□□□ -1.07
ZEB1-208ENST00000542815 ARHGEF5Q12774 1597 aa8.4□□□□□ -1.07
ZEB1-208ENST00000542815 MAP3K1Q13233 1512 aa8.39□□□□□ -1.07
ZEB1-208ENST00000542815 PLA2R1Q13018 1463 aa8.39□□□□□ -1.07
ZEB1-208ENST00000542815 LTBP4Q8N2S1 1624 aa8.39□□□□□ -1.07
ZEB1-208ENST00000542815 YEATS2Q9ULM3 1422 aa8.38□□□□□ -1.07
ZEB1-208ENST00000542815 EHBP1L1Q8N3D4 1523 aa8.38□□□□□ -1.07
ZEB1-208ENST00000542815 DEPDC5O75140 1603 aa8.38□□□□□ -1.07
ZEB1-208ENST00000542815 TIAM1Q13009 1591 aa8.37□□□□□ -1.07
ZEB1-208ENST00000542815 RTEL1-TNFRSF6BF6WH68 1400 aa8.37□□□□□ -1.07
ZEB1-208ENST00000542815 FBXO41Q8TF61 875 aa8.37□□□□□ -1.07
ZEB1-208ENST00000542815 ARHGAP5Q13017 1502 aa8.36□□□□□ -1.07
ZEB1-208ENST00000542815 ATP7AQ04656 1500 aa8.36□□□□□ -1.07
ZEB1-208ENST00000542815 SCAPERQ9BY12 1400 aa8.36□□□□□ -1.07
ZEB1-208ENST00000542815 KDM5DQ9BY66 1539 aa8.36□□□□□ -1.07
ZEB1-208ENST00000542815 CROCC2H7BZ55 1655 aa8.35□□□□□ -1.07
ZEB1-208ENST00000542815 PLEKHD1A6NEE1 506 aa8.35□□□□□ -1.07
ZEB1-208ENST00000542815 CAMSAP2Q08AD1 1489 aa8.35□□□□□ -1.07
ZEB1-208ENST00000542815 SUPT6HQ7KZ85 1726 aaKnown RBP8.34□□□□□ -1.07
ZEB1-208ENST00000542815 CLTCQ00610 1675 aaKnown RBP8.34□□□□□ -1.07
ZEB1-208ENST00000542815 ILDR1Q86SU0 546 aaPredicted RBP8.33□□□□□ -1.08
ZEB1-208ENST00000542815 GPATCH8Q9UKJ3 1502 aaKnown RBP8.33□□□□□ -1.08
ZEB1-208ENST00000542815 TCOF1Q13428 1488 aaKnown RBP8.33□□□□□ -1.08
ZEB1-208ENST00000542815 NCOA1Q15788 1441 aa8.33□□□□□ -1.08
ZEB1-208ENST00000542815 CEP162Q5TB80 1403 aa8.33□□□□□ -1.08
ZEB1-208ENST00000542815 PPP6R1Q9UPN7 881 aa8.32□□□□□ -1.08
ZEB1-208ENST00000542815 SYNMO15061 1565 aa8.32□□□□□ -1.08
ZEB1-208ENST00000542815 CHIC1Q5VXU3 224 aa8.31□□□□□ -1.08
ZEB1-208ENST00000542815 CEP170BQ9Y4F5 1589 aaPredicted RBP8.31□□□□□ -1.08
ZEB1-208ENST00000542815 TRAPPC8Q9Y2L5 1435 aa8.31□□□□□ -1.08
ZEB1-208ENST00000542815 SYCP2Q9BX26 1530 aa8.3□□□□□ -1.08
ZEB1-208ENST00000542815 MBD5Q9P267 1494 aa8.3□□□□□ -1.08
ZEB1-208ENST00000542815 EFCAB2Q5VUJ9 269 aa8.3□□□□□ -1.08
ZEB1-208ENST00000542815 CDK11AQ9UQ88 783 aaPredicted RBP8.29□□□□□ -1.08
ZEB1-208ENST00000542815 NEURL4Q96JN8 1562 aa8.29□□□□□ -1.08
ZEB1-208ENST00000542815 DNMT1P26358 1616 aaKnown RBP8.29□□□□□ -1.08
ZEB1-208ENST00000542815 UHRF1BP1Q6BDS2 1440 aa8.29□□□□□ -1.08
ZEB1-208ENST00000542815 MROH1Q8NDA8 1641 aa8.29□□□□□ -1.08
ZEB1-208ENST00000542815 RAPGEF3O95398 923 aa8.28□□□□□ -1.08
ZEB1-208ENST00000542815 MED14O60244 1454 aa8.28□□□□□ -1.08
ZEB1-208ENST00000542815 SPATA31D1Q6ZQQ2 1576 aa8.28□□□□□ -1.08
ZEB1-208ENST00000542815 KCNH8Q96L42 1107 aa8.28□□□□□ -1.08
ZEB1-208ENST00000542815 PTPRKQ15262 1439 aa8.27□□□□□ -1.08
ZEB1-208ENST00000542815 CPS1P31327 1500 aa8.27□□□□□ -1.09
ZEB1-208ENST00000542815 A2MP01023 1474 aa8.26□□□□□ -1.09
ZEB1-208ENST00000542815 A2ML1A8K2U0 1454 aa8.26□□□□□ -1.09
ZEB1-208ENST00000542815 SHANK2Q9UPX8 1470 aa8.26□□□□□ -1.09
ZEB1-208ENST00000542815 CAMSAP1Q5T5Y3 1602 aa8.25□□□□□ -1.09
ZEB1-208ENST00000542815 VWDEQ8N2E2 1590 aa8.25□□□□□ -1.09
ZEB1-208ENST00000542815 PZPP20742 1482 aa8.25□□□□□ -1.09
ZEB1-208ENST00000542815 PRDM15P57071 1507 aaPredicted RBP8.25□□□□□ -1.09
ZEB1-208ENST00000542815 LMTK2Q8IWU2 1503 aa8.24□□□□□ -1.09
ZEB1-208ENST00000542815 DMRT2Q9Y5R5 561 aa8.24□□□□□ -1.09
ZEB1-208ENST00000542815 NCOA2Q15596 1464 aa8.24□□□□□ -1.09
ZEB1-208ENST00000542815 NLRP1Q9C000 1473 aa8.23□□□□□ -1.09
ZEB1-208ENST00000542815 UBR1Q8IWV7 1749 aa8.23□□□□□ -1.09
ZEB1-208ENST00000542815 CCDC141Q6ZP82 1450 aa8.23□□□□□ -1.09
ZEB1-208ENST00000542815 PTPN23Q9H3S7 1636 aa8.22□□□□□ -1.09
ZEB1-208ENST00000542815 IQGAP1P46940 1657 aa8.22□□□□□ -1.09
ZEB1-208ENST00000542815 ALKQ9UM73 1620 aa8.21□□□□□ -1.1
ZEB1-208ENST00000542815 XIRP1Q702N8 1843 aaKnown RBP8.21□□□□□ -1.1
ZEB1-208ENST00000542815 ARHGAP31Q2M1Z3 1444 aa8.21□□□□□ -1.1
ZEB1-208ENST00000542815 SLIT1O75093 1534 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms