RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 ERICH6Q7L0X2 663 aa23.84■■□□□ 1.41
NELFA-216ENST00000542778 ATP10BO94823 1461 aa23.84■■□□□ 1.41
NELFA-216ENST00000542778 MAPKBP1O60336 1514 aa23.83■■□□□ 1.4
NELFA-216ENST00000542778 TROQ12816 1431 aaPredicted RBP23.82■■□□□ 1.4
NELFA-216ENST00000542778 TRIM52Q96A61 297 aa23.82■■□□□ 1.4
NELFA-216ENST00000542778 RRP7BPQ9NSQ0 103 aa23.82■■□□□ 1.4
NELFA-216ENST00000542778 CDK11AQ9UQ88 783 aaPredicted RBP23.82■■□□□ 1.4
NELFA-216ENST00000542778 TCOF1Q13428 1488 aaKnown RBP23.81■■□□□ 1.4
NELFA-216ENST00000542778 MYT1LQ9UL68 1186 aa23.81■■□□□ 1.4
NELFA-216ENST00000542778 CCER2I3L3R5 266 aa23.79■■□□□ 1.4
NELFA-216ENST00000542778 PPP1R15AO75807 674 aaPredicted RBP23.79■■□□□ 1.4
NELFA-216ENST00000542778 CLASP1Q7Z460 1538 aa23.77■■□□□ 1.4
NELFA-216ENST00000542778 NAIPQ13075 1403 aa23.76■■□□□ 1.39
NELFA-216ENST00000542778 MIA2Q96PC5 1412 aa23.75■■□□□ 1.39
NELFA-216ENST00000542778 HFM1A2PYH4 1435 aa23.74■■□□□ 1.39
NELFA-216ENST00000542778 SIN3AQ96ST3 1273 aa23.74■■□□□ 1.39
NELFA-216ENST00000542778 ZNF777Q9ULD5 760 aaPredicted RBP23.74■■□□□ 1.39
NELFA-216ENST00000542778 PLEKHD1A6NEE1 506 aa23.73■■□□□ 1.39
NELFA-216ENST00000542778 KDM6BO15054 1643 aa23.72■■□□□ 1.39
NELFA-216ENST00000542778 GPATCH8Q9UKJ3 1502 aaKnown RBP23.71■■□□□ 1.39
NELFA-216ENST00000542778 DEKP35659 375 aaKnown RBP23.71■■□□□ 1.39
NELFA-216ENST00000542778 UACAQ9BZF9 1416 aa23.7■■□□□ 1.38
NELFA-216ENST00000542778 ADCY10Q96PN6 1610 aa23.69■■□□□ 1.38
NELFA-216ENST00000542778 CFDP1Q9UEE9 299 aaPredicted RBP23.69■■□□□ 1.38
NELFA-216ENST00000542778 ABCC5O15440 1437 aa23.66■■□□□ 1.38
NELFA-216ENST00000542778 ANP32CO43423 234 aa23.66■■□□□ 1.38
NELFA-216ENST00000542778 DAPK1P53355 1430 aa23.65■■□□□ 1.38
NELFA-216ENST00000542778 CAMSAP2Q08AD1 1489 aa23.65■■□□□ 1.38
NELFA-216ENST00000542778 CDC42BPAQ5VT25 1732 aa23.65■■□□□ 1.38
NELFA-216ENST00000542778 ABCC10Q5T3U5 1492 aa23.63■■□□□ 1.37
NELFA-216ENST00000542778 DNMT1P26358 1616 aaKnown RBP23.62■■□□□ 1.37
NELFA-216ENST00000542778 ITSN2Q9NZM3 1697 aa23.61■■□□□ 1.37
NELFA-216ENST00000542778 GCC2Q8IWJ2 1684 aa23.59■■□□□ 1.37
NELFA-216ENST00000542778 ABCC2Q92887 1545 aa23.59■■□□□ 1.37
NELFA-216ENST00000542778 IRX6P78412 446 aaPredicted RBP23.54■■□□□ 1.36
NELFA-216ENST00000542778 DENND4BO75064 1496 aaPredicted RBP23.53■■□□□ 1.36
NELFA-216ENST00000542778 HIRIP3Q9BW71 556 aaPredicted RBP23.52■■□□□ 1.36
NELFA-216ENST00000542778 TTC37Q6PGP7 1564 aa23.51■■□□□ 1.35
NELFA-216ENST00000542778 HNRNPMP52272 730 aaKnown RBP eCLIP23.51■■□□□ 1.356e-7■■■■□ 23.8
NELFA-216ENST00000542778 FOXD1Q16676 465 aa23.51■■□□□ 1.35
NELFA-216ENST00000542778 ZCCHC11Q5TAX3 1644 aaKnown RBP23.5■■□□□ 1.35
NELFA-216ENST00000542778 AKNAQ7Z591 1439 aa23.5■■□□□ 1.35
NELFA-216ENST00000542778 CDC42BPBQ9Y5S2 1711 aa23.5■■□□□ 1.35
NELFA-216ENST00000542778 TIMELESSQ9UNS1 1208 aa23.5■■□□□ 1.35
NELFA-216ENST00000542778 ERICH6BQ5W0A0 696 aa23.48■■□□□ 1.35
NELFA-216ENST00000542778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.47■■□□□ 1.352e-7■■■■□ 26.2
NELFA-216ENST00000542778 ROCK1Q13464 1354 aa23.45■■□□□ 1.35
NELFA-216ENST00000542778 CROCC2H7BZ55 1655 aa23.45■■□□□ 1.35
NELFA-216ENST00000542778 ANO8Q9HCE9 1232 aaPredicted RBP23.45■■□□□ 1.34
NELFA-216ENST00000542778 OSCARQ8IYS5 282 aa23.44■■□□□ 1.34
NELFA-216ENST00000542778 HNRNPUQ00839 825 aaKnown RBP eCLIP23.44■■□□□ 1.34
NELFA-216ENST00000542778 PPP4R2Q9NY27 417 aa23.44■■□□□ 1.34
NELFA-216ENST00000542778 NCOA1Q15788 1441 aa23.44■■□□□ 1.34
NELFA-216ENST00000542778 SAMD9LQ8IVG5 1584 aa23.43■■□□□ 1.34
NELFA-216ENST00000542778 PREX2Q70Z35 1606 aa23.42■■□□□ 1.34
NELFA-216ENST00000542778 MPHOSPH9Q99550 1183 aa23.41■■□□□ 1.34
NELFA-216ENST00000542778 KDM5BQ9UGL1 1544 aa23.41■■□□□ 1.34
NELFA-216ENST00000542778 NOP58Q9Y2X3 529 aaKnown RBP23.4■■□□□ 1.34
NELFA-216ENST00000542778 UHRF1BP1LA0JNW5 1464 aa23.4■■□□□ 1.34
NELFA-216ENST00000542778 ADGBQ8N7X0 1667 aa23.39■■□□□ 1.34
NELFA-216ENST00000542778 MBD5Q9P267 1494 aa23.38■■□□□ 1.33
NELFA-216ENST00000542778 ARHGAP5Q13017 1502 aa23.37■■□□□ 1.33
NELFA-216ENST00000542778 C9orf84Q5VXU9 1444 aa23.36■■□□□ 1.33
NELFA-216ENST00000542778 NBR1Q14596 966 aa23.36■■□□□ 1.33
NELFA-216ENST00000542778 SYCP2Q9BX26 1530 aa23.34■■□□□ 1.33
NELFA-216ENST00000542778 ADGRL2O95490 1459 aa23.34■■□□□ 1.33
NELFA-216ENST00000542778 MYO5CQ9NQX4 1742 aa23.33■■□□□ 1.33
NELFA-216ENST00000542778 PAK3O75914 559 aaPredicted RBP23.32■■□□□ 1.32
NELFA-216ENST00000542778 ANKRD30AQ9BXX3 1397 aa23.32■■□□□ 1.32
NELFA-216ENST00000542778 TONSLQ96HA7 1378 aa23.31■■□□□ 1.32
NELFA-216ENST00000542778 TSPY4P0CV99 314 aa23.31■■□□□ 1.32
NELFA-216ENST00000542778 TSPY10P0CW01 314 aa23.31■■□□□ 1.32
NELFA-216ENST00000542778 SLC4A1APQ9BWU0 796 aaKnown RBP23.3■■□□□ 1.32
NELFA-216ENST00000542778 ARHGEF12Q9NZN5 1544 aa23.29■■□□□ 1.32
NELFA-216ENST00000542778 ANKRD50Q9ULJ7 1429 aa23.28■■□□□ 1.32
NELFA-216ENST00000542778 PZPP20742 1482 aa23.28■■□□□ 1.32
NELFA-216ENST00000542778 ARHGEF5Q12774 1597 aa23.27■■□□□ 1.32
NELFA-216ENST00000542778 B4GALNT3Q6L9W6 998 aa23.27■■□□□ 1.32
NELFA-216ENST00000542778 SALL2Q9Y467 1007 aaPredicted RBP23.27■■□□□ 1.32
NELFA-216ENST00000542778 CCDC141Q6ZP82 1450 aa23.26■■□□□ 1.31
NELFA-216ENST00000542778 SHANK2Q9UPX8 1470 aa23.26■■□□□ 1.31
NELFA-216ENST00000542778 KIF15Q9NS87 1388 aa23.25■■□□□ 1.31
NELFA-216ENST00000542778 PLCH2O75038 1416 aa23.24■■□□□ 1.31
NELFA-216ENST00000542778 WDR7Q9Y4E6 1490 aa23.22■■□□□ 1.31
NELFA-216ENST00000542778 ANKRD30BQ9BXX2 1392 aa23.22■■□□□ 1.31
NELFA-216ENST00000542778 ASXL2Q76L83 1435 aa23.19■■□□□ 1.3
NELFA-216ENST00000542778 PKD2Q13563 968 aa23.17■■□□□ 1.3
NELFA-216ENST00000542778 TRAPPC8Q9Y2L5 1435 aa23.17■■□□□ 1.3
NELFA-216ENST00000542778 NUP155O75694 1391 aa23.17■■□□□ 1.3
NELFA-216ENST00000542778 EFCAB2Q5VUJ9 269 aa23.16■■□□□ 1.3
NELFA-216ENST00000542778 L3MBTL2Q969R5 705 aa23.16■■□□□ 1.3
NELFA-216ENST00000542778 RTL5Q5HYW3 569 aaPredicted RBP23.16■■□□□ 1.3
NELFA-216ENST00000542778 AFAP1Q8N556 730 aa23.15■■□□□ 1.3
NELFA-216ENST00000542778 ABCC1P33527 1531 aa23.13■■□□□ 1.29
NELFA-216ENST00000542778 IPO9Q96P70 1041 aaKnown RBP23.13■■□□□ 1.29
NELFA-216ENST00000542778 KIAA1107Q9UPP5 1409 aa23.12■■□□□ 1.29
NELFA-216ENST00000542778 IL27Q8NEV9 243 aa23.12■■□□□ 1.29
NELFA-216ENST00000542778 RSPH4AQ5TD94 716 aa23.1■■□□□ 1.29
NELFA-216ENST00000542778 RPRD2Q5VT52 1461 aaKnown RBP23.1■■□□□ 1.29
NELFA-216ENST00000542778 ANP32AP39687 249 aaKnown RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms