RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 HOXB1P14653 301 aaPredicted RBP12.14□□□□□ -0.47
MDM2-228ENST00000542502 POTEB3A0JP26 581 aa12.13□□□□□ -0.47
MDM2-228ENST00000542502 RIMBP2O15034 1052 aa12.13□□□□□ -0.47
MDM2-228ENST00000542502 POTEBQ6S5H4 581 aa12.13□□□□□ -0.47
MDM2-228ENST00000542502 SPNS2Q8IVW8 549 aa12.08□□□□□ -0.48
MDM2-228ENST00000542502 ZSWIM6Q9HCJ5 1215 aa12.08□□□□□ -0.48
MDM2-228ENST00000542502 KRTAP3-3Q9BYR6 98 aa12.05□□□□□ -0.48
MDM2-228ENST00000542502 KRTAP3-2Q9BYR7 98 aa12.05□□□□□ -0.48
MDM2-228ENST00000542502 ERBB3P21860 1342 aa12.04□□□□□ -0.48
MDM2-228ENST00000542502 MMRN1Q13201 1228 aa12.02□□□□□ -0.49
MDM2-228ENST00000542502 GPR153Q6NV75 609 aa12.02□□□□□ -0.49
MDM2-228ENST00000542502 KIF3CO14782 793 aa12□□□□□ -0.49
MDM2-228ENST00000542502 C2orf72A6NCS6 295 aa11.98□□□□□ -0.49
MDM2-228ENST00000542502 HS6ST3Q8IZP7 471 aa11.98□□□□□ -0.49
MDM2-228ENST00000542502 VARS2Q5ST30 1063 aaKnown RBP11.97□□□□□ -0.49
MDM2-228ENST00000542502 PPP1R37O75864 691 aa11.95□□□□□ -0.5
MDM2-228ENST00000542502 ARSIQ5FYB1 569 aa11.95□□□□□ -0.5
MDM2-228ENST00000542502 TMC2Q8TDI7 906 aa11.92□□□□□ -0.5
MDM2-228ENST00000542502 CHGAP10645 457 aaKnown RBP11.9□□□□□ -0.5
MDM2-228ENST00000542502 ZNF687Q8N1G0 1237 aa11.9□□□□□ -0.5
MDM2-228ENST00000542502 KHSRPQ92945 711 aaKnown RBP eCLIP11.89□□□□□ -0.512e-9■■■□□ 16.5
MDM2-228ENST00000542502 SLC34A2O95436 690 aa11.87□□□□□ -0.51
MDM2-228ENST00000542502 ZNF316A6NFI3 1004 aaPredicted RBP11.86□□□□□ -0.51
MDM2-228ENST00000542502 DNAJC5Q9H3Z4 198 aa11.85□□□□□ -0.51
MDM2-228ENST00000542502 NUDT7P0C024 238 aa11.82□□□□□ -0.52
MDM2-228ENST00000542502 PCDHGA4Q9Y5G9 962 aa11.82□□□□□ -0.52
MDM2-228ENST00000542502 NKX1-1Q15270 411 aaPredicted RBP11.8□□□□□ -0.52
MDM2-228ENST00000542502 GPHNQ9NQX3 736 aaPredicted RBP11.78□□□□□ -0.52
MDM2-228ENST00000542502 RYDENQ9NUL5 291 aaKnown RBP11.78□□□□□ -0.52
MDM2-228ENST00000542502 FOXK1P85037 733 aa11.77□□□□□ -0.53
MDM2-228ENST00000542502 LHX6Q9UPM6 363 aa11.76□□□□□ -0.53
MDM2-228ENST00000542502 PLPP6Q8IY26 295 aa11.74□□□□□ -0.53
MDM2-228ENST00000542502 PTCD2Q8WV60 388 aaKnown RBP11.74□□□□□ -0.53
MDM2-228ENST00000542502 DSG2Q14126 1118 aa11.72□□□□□ -0.53
MDM2-228ENST00000542502 RNF166Q96A37 237 aaPredicted RBP11.71□□□□□ -0.53
MDM2-228ENST00000542502 MYT1LQ9UL68 1186 aa11.71□□□□□ -0.53
MDM2-228ENST00000542502 PBX2P40425 430 aa11.7□□□□□ -0.54
MDM2-228ENST00000542502 PTGER2P43116 358 aa11.7□□□□□ -0.54
MDM2-228ENST00000542502 LSM11P83369 360 aaKnown RBP eCLIP11.7□□□□□ -0.54
MDM2-228ENST00000542502 ANKRD13DQ6ZTN6 518 aa11.7□□□□□ -0.54
MDM2-228ENST00000542502 KDM4FA0A1W2PPD8 638 aa11.69□□□□□ -0.54
MDM2-228ENST00000542502 PSDA5PKW4 1024 aaPredicted RBP11.67□□□□□ -0.54
MDM2-228ENST00000542502 POTEEQ6S8J3 1075 aa11.66□□□□□ -0.54
MDM2-228ENST00000542502 TBC1D12O60347 775 aa11.65□□□□□ -0.54
MDM2-228ENST00000542502 CRISPLD2Q9H0B8 497 aa11.65□□□□□ -0.54
MDM2-228ENST00000542502 AXIN2Q9Y2T1 843 aa11.64□□□□□ -0.55
MDM2-228ENST00000542502 GTPBP6O43824 516 aaPredicted RBP11.63□□□□□ -0.55
MDM2-228ENST00000542502 DCAF8L2P0C7V8 631 aa11.61□□□□□ -0.55
MDM2-228ENST00000542502 ARHGAP33O14559 1287 aa11.59□□□□□ -0.55
MDM2-228ENST00000542502 OXER1Q8TDS5 423 aa11.59□□□□□ -0.55
MDM2-228ENST00000542502 NCKAP5LQ9HCH0 1330 aa11.59□□□□□ -0.55
MDM2-228ENST00000542502 PDE4AP27815 886 aa11.58□□□□□ -0.56
MDM2-228ENST00000542502 PPP1R15BQ5SWA1 713 aa11.58□□□□□ -0.56
MDM2-228ENST00000542502 PPP4R3BQ5MIZ7 849 aa11.56□□□□□ -0.56
MDM2-228ENST00000542502 UPF1Q92900 1129 aaKnown RBP eCLIP11.55□□□□□ -0.56
MDM2-228ENST00000542502 ADGRD1Q6QNK2 874 aa11.53□□□□□ -0.56
MDM2-228ENST00000542502 PSEN2P49810 448 aa11.51□□□□□ -0.57
MDM2-228ENST00000542502 LARP6Q9BRS8 491 aaKnown RBP11.51□□□□□ -0.57
MDM2-228ENST00000542502 TK2O00142 265 aa11.5□□□□□ -0.57
MDM2-228ENST00000542502 DMRTA1Q5VZB9 504 aa11.49□□□□□ -0.57
MDM2-228ENST00000542502 DDX27Q96GQ7 796 aaKnown RBP11.49□□□□□ -0.57
MDM2-228ENST00000542502 MFSD10Q14728 455 aa11.47□□□□□ -0.57
MDM2-228ENST00000542502 ZNF454Q8N9F8 522 aa11.46□□□□□ -0.57
MDM2-228ENST00000542502 KCNH8Q96L42 1107 aa11.46□□□□□ -0.57
MDM2-228ENST00000542502 HRO43593 1189 aa11.45□□□□□ -0.58
MDM2-228ENST00000542502 KCNK17Q96T54 332 aa11.45□□□□□ -0.58
MDM2-228ENST00000542502 ANO8Q9HCE9 1232 aaPredicted RBP11.45□□□□□ -0.58
MDM2-228ENST00000542502 FOSBP53539 338 aa11.43□□□□□ -0.58
MDM2-228ENST00000542502 EVI5O60447 810 aa11.42□□□□□ -0.58
MDM2-228ENST00000542502 BCL2L12Q9HB09 334 aa11.42□□□□□ -0.58
MDM2-228ENST00000542502 CADPS2Q86UW7 1296 aa11.41□□□□□ -0.58
MDM2-228ENST00000542502 MAP3K9P80192 1104 aa11.4□□□□□ -0.58
MDM2-228ENST00000542502 HCSTQ9UBK5 93 aa11.4□□□□□ -0.58
MDM2-228ENST00000542502 JPH4Q96JJ6 628 aa11.39□□□□□ -0.59
MDM2-228ENST00000542502 EMILIN3Q9NT22 766 aa11.38□□□□□ -0.59
MDM2-228ENST00000542502 VPS9D1Q9Y2B5 631 aa11.38□□□□□ -0.59
MDM2-228ENST00000542502 STAC3Q96MF2 364 aa11.37□□□□□ -0.59
MDM2-228ENST00000542502 PTPREP23469 700 aa11.36□□□□□ -0.59
MDM2-228ENST00000542502 BBXQ8WY36 941 aaPredicted RBP11.36□□□□□ -0.59
MDM2-228ENST00000542502 SLC4A5Q9BY07 1137 aa11.36□□□□□ -0.59
MDM2-228ENST00000542502 ZDHHC16Q969W1 377 aa11.35□□□□□ -0.59
MDM2-228ENST00000542502 ADAM33Q9BZ11 813 aa11.32□□□□□ -0.6
MDM2-228ENST00000542502 KCTD12Q96CX2 325 aaKnown RBP11.31□□□□□ -0.6
MDM2-228ENST00000542502 CAMK2BQ13554 666 aa11.3□□□□□ -0.6
MDM2-228ENST00000542502 ZBED2Q9BTP6 218 aa11.3□□□□□ -0.6
MDM2-228ENST00000542502 BHMG1C9JSJ3 638 aaPredicted RBP11.28□□□□□ -0.6
MDM2-228ENST00000542502 AMER1Q5JTC6 1135 aaPredicted RBP11.28□□□□□ -0.6
MDM2-228ENST00000542502 PLA2G2EQ9NZK7 142 aa11.28□□□□□ -0.6
MDM2-228ENST00000542502 PCDHGA10Q9Y5H3 936 aa11.28□□□□□ -0.6
MDM2-228ENST00000542502 PHF14O94880 888 aa11.25□□□□□ -0.61
MDM2-228ENST00000542502 FBXW7Q969H0 707 aa11.25□□□□□ -0.61
MDM2-228ENST00000542502 TYW1BQ6NUM6 668 aa11.24□□□□□ -0.61
MDM2-228ENST00000542502 SPRYD3Q8NCJ5 442 aa11.24□□□□□ -0.61
MDM2-228ENST00000542502 PPP1R3GB7ZBB8 358 aa11.23□□□□□ -0.61
MDM2-228ENST00000542502 DPYSL4O14531 572 aa11.23□□□□□ -0.61
MDM2-228ENST00000542502 MRPL50Q8N5N7 158 aaKnown RBP11.22□□□□□ -0.61
MDM2-228ENST00000542502 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.22□□□□□ -0.61
MDM2-228ENST00000542502 GOLGA8CPA6NN73 597 aa11.2□□□□□ -0.62
MDM2-228ENST00000542502 NBPF3Q9H094 633 aa11.2□□□□□ -0.62
MDM2-228ENST00000542502 RTN4Q9NQC3 1192 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms