RNA–Protein interactions for RNA: ENST00000542219.1

LINC02421-201, Transcript of long intergenic non-protein coding RNA 2421, humanhuman

TSL 1 (best) BASIC

Gene LINC02421, Length 3,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02421-201ENST00000542219 CCDC136Q96JN2 1154 aa8.41□□□□□ -1.06
LINC02421-201ENST00000542219 KDM5DQ9BY66 1539 aa8.41□□□□□ -1.06
LINC02421-201ENST00000542219 CDC42BPAQ5VT25 1732 aa8.4□□□□□ -1.06
LINC02421-201ENST00000542219 SHANK2Q9UPX8 1470 aa8.4□□□□□ -1.06
LINC02421-201ENST00000542219 PPP1R15AO75807 674 aaPredicted RBP8.4□□□□□ -1.07
LINC02421-201ENST00000542219 DAPK1P53355 1430 aa8.4□□□□□ -1.07
LINC02421-201ENST00000542219 SALL2Q9Y467 1007 aaPredicted RBP8.39□□□□□ -1.07
LINC02421-201ENST00000542219 SHROOM2Q13796 1616 aa8.39□□□□□ -1.07
LINC02421-201ENST00000542219 PKNOX2Q96KN3 472 aa8.39□□□□□ -1.07
LINC02421-201ENST00000542219 TEX14Q8IWB6 1497 aa8.38□□□□□ -1.07
LINC02421-201ENST00000542219 MBD5Q9P267 1494 aa8.38□□□□□ -1.07
LINC02421-201ENST00000542219 ARHGEF5Q12774 1597 aa8.38□□□□□ -1.07
LINC02421-201ENST00000542219 TROQ12816 1431 aaPredicted RBP8.37□□□□□ -1.07
LINC02421-201ENST00000542219 DNAJC5BQ9UF47 199 aa8.37□□□□□ -1.07
LINC02421-201ENST00000542219 FAM50AQ14320 339 aaKnown RBP8.36□□□□□ -1.07
LINC02421-201ENST00000542219 P3H3Q8IVL6 736 aa8.36□□□□□ -1.07
LINC02421-201ENST00000542219 ABCC5O15440 1437 aa8.36□□□□□ -1.07
LINC02421-201ENST00000542219 RPRD2Q5VT52 1461 aaKnown RBP8.36□□□□□ -1.07
LINC02421-201ENST00000542219 KIF14Q15058 1648 aa8.36□□□□□ -1.07
LINC02421-201ENST00000542219 ABCC10Q5T3U5 1492 aa8.35□□□□□ -1.07
LINC02421-201ENST00000542219 CCER2I3L3R5 266 aa8.35□□□□□ -1.07
LINC02421-201ENST00000542219 CAMSAP2Q08AD1 1489 aa8.35□□□□□ -1.07
LINC02421-201ENST00000542219 MAST1Q9Y2H9 1570 aa8.35□□□□□ -1.07
LINC02421-201ENST00000542219 PREX2Q70Z35 1606 aa8.34□□□□□ -1.07
LINC02421-201ENST00000542219 PZPP20742 1482 aa8.33□□□□□ -1.08
LINC02421-201ENST00000542219 GPATCH8Q9UKJ3 1502 aaKnown RBP8.33□□□□□ -1.08
LINC02421-201ENST00000542219 TSHZ2Q9NRE2 1034 aa8.32□□□□□ -1.08
LINC02421-201ENST00000542219 SIN3AQ96ST3 1273 aa8.32□□□□□ -1.08
LINC02421-201ENST00000542219 TONSLQ96HA7 1378 aa8.32□□□□□ -1.08
LINC02421-201ENST00000542219 ANKRD30BQ9BXX2 1392 aa8.32□□□□□ -1.08
LINC02421-201ENST00000542219 ARHGEF12Q9NZN5 1544 aa8.31□□□□□ -1.08
LINC02421-201ENST00000542219 ITGAEP38570 1179 aa8.31□□□□□ -1.08
LINC02421-201ENST00000542219 SPATA31E1Q6ZUB1 1445 aa8.3□□□□□ -1.08
LINC02421-201ENST00000542219 UNC13BO14795 1591 aa8.3□□□□□ -1.08
LINC02421-201ENST00000542219 CDC42BPBQ9Y5S2 1711 aa8.3□□□□□ -1.08
LINC02421-201ENST00000542219 PTPRGP23470 1445 aa8.3□□□□□ -1.08
LINC02421-201ENST00000542219 NCOA1Q15788 1441 aa8.3□□□□□ -1.08
LINC02421-201ENST00000542219 CARMIL2Q6F5E8 1435 aa8.3□□□□□ -1.08
LINC02421-201ENST00000542219 LAMC1P11047 1609 aa8.3□□□□□ -1.08
LINC02421-201ENST00000542219 PLXNC1O60486 1568 aa8.3□□□□□ -1.08
LINC02421-201ENST00000542219 CHD1O14646 1710 aa8.29□□□□□ -1.08
LINC02421-201ENST00000542219 E9PCH4 1651 aa8.29□□□□□ -1.08
LINC02421-201ENST00000542219 KDM5CP41229 1560 aa8.28□□□□□ -1.08
LINC02421-201ENST00000542219 UHRF1BP1Q6BDS2 1440 aa8.28□□□□□ -1.08
LINC02421-201ENST00000542219 PLB1Q6P1J6 1458 aa8.28□□□□□ -1.08
LINC02421-201ENST00000542219 CNTLNQ9NXG0 1405 aa8.26□□□□□ -1.09
LINC02421-201ENST00000542219 SAMD9LQ8IVG5 1584 aa8.26□□□□□ -1.09
LINC02421-201ENST00000542219 ERCC6Q03468 1493 aa8.26□□□□□ -1.09
LINC02421-201ENST00000542219 ERICH6BQ5W0A0 696 aa8.26□□□□□ -1.09
LINC02421-201ENST00000542219 ATP10BO94823 1461 aa8.26□□□□□ -1.09
LINC02421-201ENST00000542219 PRG4Q92954 1404 aaPredicted RBP8.25□□□□□ -1.09
LINC02421-201ENST00000542219 KIAA1107Q9UPP5 1409 aa8.25□□□□□ -1.09
LINC02421-201ENST00000542219 MAGI2Q86UL8 1455 aa8.25□□□□□ -1.09
LINC02421-201ENST00000542219 YTHDC1Q96MU7 727 aaKnown RBP8.25□□□□□ -1.09
LINC02421-201ENST00000542219 ZMYM4Q5VZL5 1548 aa8.25□□□□□ -1.09
LINC02421-201ENST00000542219 IQGAP3Q86VI3 1631 aa8.25□□□□□ -1.09
LINC02421-201ENST00000542219 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.25□□□□□ -1.09
LINC02421-201ENST00000542219 MYO5CQ9NQX4 1742 aa8.24□□□□□ -1.09
LINC02421-201ENST00000542219 CDK11AQ9UQ88 783 aaPredicted RBP8.24□□□□□ -1.09
LINC02421-201ENST00000542219 SUPT16HQ9Y5B9 1047 aaKnown RBP8.24□□□□□ -1.09
LINC02421-201ENST00000542219 RALGAPBQ86X10 1494 aa8.24□□□□□ -1.09
LINC02421-201ENST00000542219 MPHOSPH9Q99550 1183 aa8.24□□□□□ -1.09
LINC02421-201ENST00000542219 ATP1B4Q9UN42 357 aaPredicted RBP8.23□□□□□ -1.09
LINC02421-201ENST00000542219 BCORL1Q5H9F3 1711 aa8.23□□□□□ -1.09
LINC02421-201ENST00000542219 CLASP1Q7Z460 1538 aa8.23□□□□□ -1.09
LINC02421-201ENST00000542219 ARAP3Q8WWN8 1544 aa8.23□□□□□ -1.09
LINC02421-201ENST00000542219 TRPM1Q7Z4N2 1603 aa8.22□□□□□ -1.09
LINC02421-201ENST00000542219 UHRF1BP1LA0JNW5 1464 aa8.22□□□□□ -1.09
LINC02421-201ENST00000542219 NEURL4Q96JN8 1562 aa8.21□□□□□ -1.1
LINC02421-201ENST00000542219 ABCC2Q92887 1545 aa8.21□□□□□ -1.1
LINC02421-201ENST00000542219 ARID4BQ4LE39 1312 aaPredicted RBP8.21□□□□□ -1.1
LINC02421-201ENST00000542219 RNF17Q9BXT8 1623 aaKnown RBP8.21□□□□□ -1.1
LINC02421-201ENST00000542219 ANKRD30AQ9BXX3 1397 aa8.21□□□□□ -1.1
LINC02421-201ENST00000542219 TTC37Q6PGP7 1564 aa8.2□□□□□ -1.1
LINC02421-201ENST00000542219 ATP10AO60312 1499 aa8.2□□□□□ -1.1
LINC02421-201ENST00000542219 C9orf84Q5VXU9 1444 aa8.2□□□□□ -1.1
LINC02421-201ENST00000542219 INSRP06213 1382 aa8.2□□□□□ -1.1
LINC02421-201ENST00000542219 CCDC141Q6ZP82 1450 aa8.2□□□□□ -1.1
LINC02421-201ENST00000542219 CCDC7Q96M83 1385 aa8.2□□□□□ -1.1
LINC02421-201ENST00000542219 WASHC2AQ641Q2 1341 aa8.2□□□□□ -1.1
LINC02421-201ENST00000542219 DEPDC5O75140 1603 aa8.2□□□□□ -1.1
LINC02421-201ENST00000542219 DDX10Q13206 875 aaKnown RBP8.19□□□□□ -1.1
LINC02421-201ENST00000542219 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.19□□□□□ -1.1
LINC02421-201ENST00000542219 PLEKHH2Q8IVE3 1493 aa8.19□□□□□ -1.1
LINC02421-201ENST00000542219 ANP32CO43423 234 aa8.18□□□□□ -1.1
LINC02421-201ENST00000542219 ANKRD50Q9ULJ7 1429 aa8.18□□□□□ -1.1
LINC02421-201ENST00000542219 EIF2AK4Q9P2K8 1649 aaKnown RBP8.18□□□□□ -1.1
LINC02421-201ENST00000542219 RRP7BPQ9NSQ0 103 aa8.18□□□□□ -1.1
LINC02421-201ENST00000542219 ZCCHC11Q5TAX3 1644 aaKnown RBP8.18□□□□□ -1.1
LINC02421-201ENST00000542219 FAM135AQ9P2D6 1515 aa8.17□□□□□ -1.1
LINC02421-201ENST00000542219 HSPA5P11021 654 aaKnown RBP8.17□□□□□ -1.1
LINC02421-201ENST00000542219 JPH4Q96JJ6 628 aa8.17□□□□□ -1.1
LINC02421-201ENST00000542219 KCNH8Q96L42 1107 aa8.17□□□□□ -1.1
LINC02421-201ENST00000542219 DEKP35659 375 aaKnown RBP8.16□□□□□ -1.1
LINC02421-201ENST00000542219 EIF4G2P78344 907 aaKnown RBP eCLIP8.16□□□□□ -1.1
LINC02421-201ENST00000542219 L3MBTL2Q969R5 705 aa8.16□□□□□ -1.1
LINC02421-201ENST00000542219 ABCC1P33527 1531 aa8.16□□□□□ -1.1
LINC02421-201ENST00000542219 ZNF644Q9H582 1327 aaPredicted RBP8.15□□□□□ -1.1
LINC02421-201ENST00000542219 PRDM15P57071 1507 aaPredicted RBP8.15□□□□□ -1.1
LINC02421-201ENST00000542219 DUOX2Q9NRD8 1548 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms