RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 MARCH6O60337 910 aa8.13□□□□□ -1.11
DMD-228ENST00000541735 CTDP1Q9Y5B0 961 aaPredicted RBP8.13□□□□□ -1.11
DMD-228ENST00000541735 RASSF8Q8NHQ8 419 aa8.13□□□□□ -1.11
DMD-228ENST00000541735 CFDP1Q9UEE9 299 aaPredicted RBP8.13□□□□□ -1.11
DMD-228ENST00000541735 HSP90B1P14625 803 aaKnown RBP8.13□□□□□ -1.11
DMD-228ENST00000541735 DRC7Q8IY82 874 aa8.13□□□□□ -1.11
DMD-228ENST00000541735 CARD11Q9BXL7 1154 aa8.12□□□□□ -1.11
DMD-228ENST00000541735 HSP90AB1P08238 724 aaKnown RBP8.12□□□□□ -1.11
DMD-228ENST00000541735 BECN1Q14457 450 aa8.11□□□□□ -1.11
DMD-228ENST00000541735 HDGFP51858 240 aaKnown RBP8.11□□□□□ -1.11
DMD-228ENST00000541735 WDR70Q9NW82 654 aa8.11□□□□□ -1.11
DMD-228ENST00000541735 KIAA2012Q0VF49 1180 aa8.11□□□□□ -1.11
DMD-228ENST00000541735 TRIM34Q9BYJ4 488 aa8.1□□□□□ -1.11
DMD-228ENST00000541735 TCEAL9Q9UHQ7 104 aa8.1□□□□□ -1.11
DMD-228ENST00000541735 GOLGA6L6A8MZA4 724 aa8.1□□□□□ -1.11
DMD-228ENST00000541735 IBSPP21815 317 aaPredicted RBP8.1□□□□□ -1.11
DMD-228ENST00000541735 A0A0U1RQG5 324 aaPredicted RBP8.09□□□□□ -1.11
DMD-228ENST00000541735 CFAP44Q96MT7 982 aa8.09□□□□□ -1.11
DMD-228ENST00000541735 ARID3AQ99856 593 aa8.09□□□□□ -1.11
DMD-228ENST00000541735 NGDNQ8NEJ9 315 aaKnown RBP8.08□□□□□ -1.12
DMD-228ENST00000541735 SLC4A3P48751 1232 aa8.08□□□□□ -1.12
DMD-228ENST00000541735 SCRIBQ14160 1630 aa8.08□□□□□ -1.12
DMD-228ENST00000541735 VSIG10Q8N0Z9 540 aa8.08□□□□□ -1.12
DMD-228ENST00000541735 GLIPR1L2Q4G1C9 344 aa8.07□□□□□ -1.12
DMD-228ENST00000541735 NOL8Q76FK4 1167 aaKnown RBP8.07□□□□□ -1.12
DMD-228ENST00000541735 L1TD1Q5T7N2 865 aaKnown RBP8.07□□□□□ -1.12
DMD-228ENST00000541735 RTN4Q9NQC3 1192 aaKnown RBP8.06□□□□□ -1.12
DMD-228ENST00000541735 SLC4A10Q6U841 1118 aa8.06□□□□□ -1.12
DMD-228ENST00000541735 PES1O00541 588 aaKnown RBP8.06□□□□□ -1.12
DMD-228ENST00000541735 PIP4K2BP78356 416 aa8.05□□□□□ -1.12
DMD-228ENST00000541735 B4GALNT3Q6L9W6 998 aa8.05□□□□□ -1.12
DMD-228ENST00000541735 SF3B2Q13435 895 aaKnown RBP8.05□□□□□ -1.12
DMD-228ENST00000541735 MORC1Q86VD1 984 aa8.05□□□□□ -1.12
DMD-228ENST00000541735 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.04□□□□□ -1.12
DMD-228ENST00000541735 NUTM2BA6NNL0 878 aaPredicted RBP8.04□□□□□ -1.12
DMD-228ENST00000541735 NUTM2EB1AL46 878 aaPredicted RBP8.04□□□□□ -1.12
DMD-228ENST00000541735 CHAF1AQ13111 956 aaPredicted RBP8.04□□□□□ -1.12
DMD-228ENST00000541735 PAXIP1Q6ZW49 1069 aaPredicted RBP8.04□□□□□ -1.12
DMD-228ENST00000541735 NUTM2AQ8IVF1 878 aaPredicted RBP8.04□□□□□ -1.12
DMD-228ENST00000541735 CYB5RLQ6IPT4 315 aa8.04□□□□□ -1.12
DMD-228ENST00000541735 EID1Q9Y6B2 187 aa8.04□□□□□ -1.12
DMD-228ENST00000541735 USP35Q9P2H5 1018 aa8.04□□□□□ -1.12
DMD-228ENST00000541735 DCAF11Q8TEB1 546 aa8.04□□□□□ -1.12
DMD-228ENST00000541735 CEP89Q96ST8 783 aa8.04□□□□□ -1.12
DMD-228ENST00000541735 CDCA8Q53HL2 280 aa8.04□□□□□ -1.12
DMD-228ENST00000541735 KIAA1211Q6ZU35 1233 aa8.03□□□□□ -1.12
DMD-228ENST00000541735 CCAR1Q8IX12 1150 aaKnown RBP8.03□□□□□ -1.12
DMD-228ENST00000541735 DHX16O60231 1041 aaKnown RBP8.03□□□□□ -1.12
DMD-228ENST00000541735 ANP32EQ9BTT0 268 aa8.03□□□□□ -1.12
DMD-228ENST00000541735 MTMR7Q9Y216 660 aa8.03□□□□□ -1.12
DMD-228ENST00000541735 AMPHP49418 695 aa8.03□□□□□ -1.12
DMD-228ENST00000541735 FAM177BA6PVY3 158 aa8.02□□□□□ -1.13
DMD-228ENST00000541735 NAP1L5Q96NT1 182 aaPredicted RBP8.02□□□□□ -1.13
DMD-228ENST00000541735 PAF1Q8N7H5 531 aa8.02□□□□□ -1.13
DMD-228ENST00000541735 TRIM6-TRIM34B2RNG4 842 aa8.02□□□□□ -1.13
DMD-228ENST00000541735 NRDCO43847 1150 aa8.01□□□□□ -1.13
DMD-228ENST00000541735 PPM1FP49593 454 aaPredicted RBP8.01□□□□□ -1.13
DMD-228ENST00000541735 HDGFL2Q7Z4V5 671 aaPredicted RBP8.01□□□□□ -1.13
DMD-228ENST00000541735 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.01□□□□□ -1.13
DMD-228ENST00000541735 FYB1O15117 783 aa8.01□□□□□ -1.13
DMD-228ENST00000541735 PATL2C9JE40 543 aaKnown RBP8□□□□□ -1.13
DMD-228ENST00000541735 KANK1Q14678 1352 aa8□□□□□ -1.13
DMD-228ENST00000541735 EIF4G1Q04637 1599 aaKnown RBP8□□□□□ -1.13
DMD-228ENST00000541735 MCCP23508 829 aa8□□□□□ -1.13
DMD-228ENST00000541735 NECTIN2Q92692 538 aa8□□□□□ -1.13
DMD-228ENST00000541735 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8□□□□□ -1.132e-9■■■■■ 240.7
DMD-228ENST00000541735 VPS37DQ86XT2 251 aa7.99□□□□□ -1.13
DMD-228ENST00000541735 MYCNP04198 464 aaPredicted RBP7.99□□□□□ -1.13
DMD-228ENST00000541735 FOXD4L5Q5VV16 416 aaPredicted RBP7.99□□□□□ -1.13
DMD-228ENST00000541735 FOXD4L4Q8WXT5 416 aaPredicted RBP7.99□□□□□ -1.13
DMD-228ENST00000541735 U2AF1L5P0DN76 240 aaPredicted RBP7.98□□□□□ -1.13
DMD-228ENST00000541735 U2AF1Q01081 240 aaKnown RBP eCLIP7.98□□□□□ -1.13
DMD-228ENST00000541735 NOL10Q9BSC4 688 aaKnown RBP7.98□□□□□ -1.13
DMD-228ENST00000541735 DDRGK1Q96HY6 314 aa7.98□□□□□ -1.13
DMD-228ENST00000541735 FOXD4L1Q9NU39 408 aa7.98□□□□□ -1.13
DMD-228ENST00000541735 ZNF428Q96B54 188 aa7.97□□□□□ -1.13
DMD-228ENST00000541735 KDM4AO75164 1064 aa7.97□□□□□ -1.13
DMD-228ENST00000541735 ITPRIPQ8IWB1 547 aa7.97□□□□□ -1.13
DMD-228ENST00000541735 GRM1Q13255 1194 aa7.96□□□□□ -1.13
DMD-228ENST00000541735 TMEM132AQ24JP5 1023 aa7.96□□□□□ -1.13
DMD-228ENST00000541735 FOXD1Q16676 465 aa7.96□□□□□ -1.13
DMD-228ENST00000541735 SUPT16HQ9Y5B9 1047 aaKnown RBP7.96□□□□□ -1.13
DMD-228ENST00000541735 ACIN1Q9UKV3 1341 aaKnown RBP7.96□□□□□ -1.14
DMD-228ENST00000541735 CHMP4BP1P59074 171 aa7.96□□□□□ -1.14
DMD-228ENST00000541735 RBM33Q96EV2 1170 aaKnown RBP7.96□□□□□ -1.14
DMD-228ENST00000541735 STK31Q9BXU1 1019 aa7.96□□□□□ -1.14
DMD-228ENST00000541735 CCDC180Q9P1Z9 1646 aa7.96□□□□□ -1.14
DMD-228ENST00000541735 TCERG1O14776 1098 aaKnown RBP7.95□□□□□ -1.14
DMD-228ENST00000541735 CCDC43Q96MW1 224 aaKnown RBP7.95□□□□□ -1.14
DMD-228ENST00000541735 EIF2S2P20042 333 aaKnown RBP7.95□□□□□ -1.14
DMD-228ENST00000541735 FOXD4L6Q3SYB3 417 aaPredicted RBP7.95□□□□□ -1.14
DMD-228ENST00000541735 NUTM2GQ5VZR2 741 aa7.95□□□□□ -1.14
DMD-228ENST00000541735 FOXD4L3Q6VB84 417 aaPredicted RBP7.95□□□□□ -1.14
DMD-228ENST00000541735 ZCCHC6Q5VYS8 1495 aaKnown RBP7.95□□□□□ -1.14
DMD-228ENST00000541735 SPAG9O60271 1321 aaKnown RBP7.95□□□□□ -1.14
DMD-228ENST00000541735 IKQ13123 557 aaPredicted RBP7.95□□□□□ -1.14
DMD-228ENST00000541735 HSCBQ8IWL3 235 aa7.95□□□□□ -1.14
DMD-228ENST00000541735 APPP05067 770 aa7.94□□□□□ -1.14
DMD-228ENST00000541735 PLIN1O60240 522 aa7.94□□□□□ -1.14
DMD-228ENST00000541735 TMF1P82094 1093 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms