RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 ARHGAP35Q9NRY4 1499 aa21.75■■□□□ 1.07
SCARB1-207ENST00000541661 MYO5CQ9NQX4 1742 aa21.75■■□□□ 1.07
SCARB1-207ENST00000541661 EFCAB2Q5VUJ9 269 aa21.73■■□□□ 1.07
SCARB1-207ENST00000541661 CDK11AQ9UQ88 783 aaPredicted RBP21.73■■□□□ 1.07
SCARB1-207ENST00000541661 FER1L4A9Z1Z3 1794 aa21.71■■□□□ 1.07
SCARB1-207ENST00000541661 ATP10AO60312 1499 aa21.71■■□□□ 1.07
SCARB1-207ENST00000541661 ATP1B4Q9UN42 357 aaPredicted RBP21.71■■□□□ 1.07
SCARB1-207ENST00000541661 KIF14Q15058 1648 aa21.69■■□□□ 1.06
SCARB1-207ENST00000541661 MLECQ14165 292 aa21.68■■□□□ 1.06
SCARB1-207ENST00000541661 ARHGEF12Q9NZN5 1544 aa21.68■■□□□ 1.06
SCARB1-207ENST00000541661 TROQ12816 1431 aaPredicted RBP21.67■■□□□ 1.06
SCARB1-207ENST00000541661 C9orf84Q5VXU9 1444 aa21.67■■□□□ 1.06
SCARB1-207ENST00000541661 HSPA2P54652 639 aa21.67■■□□□ 1.06
SCARB1-207ENST00000541661 EHMT2Q96KQ7 1210 aa21.66■■□□□ 1.06
SCARB1-207ENST00000541661 PLPPR3Q6T4P5 718 aa21.65■■□□□ 1.06
SCARB1-207ENST00000541661 LRRIQ1Q96JM4 1722 aa21.65■■□□□ 1.06
SCARB1-207ENST00000541661 ZNF518AQ6AHZ1 1483 aa21.64■■□□□ 1.06
SCARB1-207ENST00000541661 KDM5CP41229 1560 aa21.63■■□□□ 1.05
SCARB1-207ENST00000541661 CHIC1Q5VXU3 224 aa21.63■■□□□ 1.05
SCARB1-207ENST00000541661 CLIP1P30622 1438 aa21.62■■□□□ 1.05
SCARB1-207ENST00000541661 ARHGAP5Q13017 1502 aa21.61■■□□□ 1.05
SCARB1-207ENST00000541661 AFAP1Q8N556 730 aa21.6■■□□□ 1.05
SCARB1-207ENST00000541661 CDC42BPBQ9Y5S2 1711 aa21.59■■□□□ 1.05
SCARB1-207ENST00000541661 PREX1Q8TCU6 1659 aa21.59■■□□□ 1.05
SCARB1-207ENST00000541661 REREQ9P2R6 1566 aa21.57■■□□□ 1.04
SCARB1-207ENST00000541661 MLH3Q9UHC1 1453 aa21.55■■□□□ 1.04
SCARB1-207ENST00000541661 DIP2CQ9Y2E4 1556 aa21.55■■□□□ 1.04
SCARB1-207ENST00000541661 CEBPAP49715 358 aaPredicted RBP21.54■■□□□ 1.04
SCARB1-207ENST00000541661 PREX2Q70Z35 1606 aa21.53■■□□□ 1.04
SCARB1-207ENST00000541661 CASKIN1Q8WXD9 1431 aa21.53■■□□□ 1.04
SCARB1-207ENST00000541661 CCDC18Q5T9S5 1454 aa21.52■■□□□ 1.04
SCARB1-207ENST00000541661 SETD1BQ9UPS6 1966 aaKnown RBP21.52■■□□□ 1.04
SCARB1-207ENST00000541661 CERKQ8TCT0 537 aa21.52■■□□□ 1.04
SCARB1-207ENST00000541661 ABCA6Q8N139 1617 aa21.51■■□□□ 1.03
SCARB1-207ENST00000541661 ABCC1P33527 1531 aa21.5■■□□□ 1.03
SCARB1-207ENST00000541661 MYT1LQ9UL68 1186 aa21.49■■□□□ 1.03
SCARB1-207ENST00000541661 ITSN2Q9NZM3 1697 aa21.49■■□□□ 1.03
SCARB1-207ENST00000541661 AGLP35573 1532 aa21.49■■□□□ 1.03
SCARB1-207ENST00000541661 TRAPPC8Q9Y2L5 1435 aa21.48■■□□□ 1.03
SCARB1-207ENST00000541661 STRCQ7RTU9 1775 aa21.48■■□□□ 1.03
SCARB1-207ENST00000541661 CDC42BPAQ5VT25 1732 aa21.46■■□□□ 1.03
SCARB1-207ENST00000541661 UHRF1BP1Q6BDS2 1440 aa21.46■■□□□ 1.03
SCARB1-207ENST00000541661 C3P01024 1663 aa21.45■■□□□ 1.02
SCARB1-207ENST00000541661 DMRT2Q9Y5R5 561 aa21.45■■□□□ 1.02
SCARB1-207ENST00000541661 KIDINS220Q9ULH0 1771 aa21.45■■□□□ 1.02
SCARB1-207ENST00000541661 FYCO1Q9BQS8 1478 aa21.43■■□□□ 1.02
SCARB1-207ENST00000541661 ESF1Q9H501 851 aaKnown RBP21.38■■□□□ 1.01
SCARB1-207ENST00000541661 SAMD9LQ8IVG5 1584 aa21.38■■□□□ 1.01
SCARB1-207ENST00000541661 CNTLNQ9NXG0 1405 aa21.38■■□□□ 1.01
SCARB1-207ENST00000541661 GPATCH8Q9UKJ3 1502 aaKnown RBP21.36■■□□□ 1.01
SCARB1-207ENST00000541661 PTPRTO14522 1441 aa21.36■■□□□ 1.01
SCARB1-207ENST00000541661 ZNF777Q9ULD5 760 aaPredicted RBP21.33■■□□□ 1.01
SCARB1-207ENST00000541661 MROH2AA6NES4 1674 aa21.33■■□□□ 1
SCARB1-207ENST00000541661 SYCP2Q9BX26 1530 aa21.32■■□□□ 1
SCARB1-207ENST00000541661 SPAG9O60271 1321 aaKnown RBP21.3■■□□□ 1
SCARB1-207ENST00000541661 KIAA1107Q9UPP5 1409 aa21.3■■□□□ 1
SCARB1-207ENST00000541661 HNRNPMP52272 730 aaKnown RBP eCLIP21.3■■□□□ 13e-9■■■■■ 27.7
SCARB1-207ENST00000541661 NPATQ14207 1427 aa21.29■■□□□ 1
SCARB1-207ENST00000541661 PLEKHH2Q8IVE3 1493 aa21.28■■□□□ 1
SCARB1-207ENST00000541661 SUPT6HQ7KZ85 1726 aaKnown RBP21.28■■□□□ 1
SCARB1-207ENST00000541661 ZMYM3Q14202 1370 aa21.27■■□□□ 1
SCARB1-207ENST00000541661 ATP7AQ04656 1500 aa21.27■■□□□ 1
SCARB1-207ENST00000541661 NCOA1Q15788 1441 aa21.27■■□□□ 1
SCARB1-207ENST00000541661 INO80Q9ULG1 1556 aaPredicted RBP21.27■□□□□ 0.99
SCARB1-207ENST00000541661 CFDP1Q9UEE9 299 aaPredicted RBP21.26■□□□□ 0.99
SCARB1-207ENST00000541661 PLXNC1O60486 1568 aa21.26■□□□□ 0.99
SCARB1-207ENST00000541661 LTBP4Q8N2S1 1624 aa21.25■□□□□ 0.99
SCARB1-207ENST00000541661 CCNB3Q8WWL7 1395 aa21.24■□□□□ 0.99
SCARB1-207ENST00000541661 A2MP01023 1474 aa21.23■□□□□ 0.99
SCARB1-207ENST00000541661 CAMSAP1Q5T5Y3 1602 aa21.22■□□□□ 0.99
SCARB1-207ENST00000541661 CLTCQ00610 1675 aaKnown RBP21.21■□□□□ 0.99
SCARB1-207ENST00000541661 IQSEC2Q5JU85 1478 aa21.21■□□□□ 0.99
SCARB1-207ENST00000541661 MTUS2Q5JR59 1369 aa21.21■□□□□ 0.99
SCARB1-207ENST00000541661 ADGBQ8N7X0 1667 aa21.19■□□□□ 0.98
SCARB1-207ENST00000541661 PPP6R1Q9UPN7 881 aa21.18■□□□□ 0.98
SCARB1-207ENST00000541661 ZNF142P52746 1687 aaPredicted RBP21.18■□□□□ 0.98
SCARB1-207ENST00000541661 TIAM1Q13009 1591 aa21.17■□□□□ 0.98
SCARB1-207ENST00000541661 PTPRKQ15262 1439 aa21.16■□□□□ 0.98
SCARB1-207ENST00000541661 MYO3AQ8NEV4 1616 aa21.15■□□□□ 0.98
SCARB1-207ENST00000541661 MBD5Q9P267 1494 aa21.15■□□□□ 0.98
SCARB1-207ENST00000541661 GGT6Q6P531 493 aa21.15■□□□□ 0.98
SCARB1-207ENST00000541661 ZNF644Q9H582 1327 aaPredicted RBP21.14■□□□□ 0.97
SCARB1-207ENST00000541661 EHBP1L1Q8N3D4 1523 aa21.14■□□□□ 0.97
SCARB1-207ENST00000541661 PLA2R1Q13018 1463 aa21.13■□□□□ 0.97
SCARB1-207ENST00000541661 RTEL1-TNFRSF6BF6WH68 1400 aa21.13■□□□□ 0.97
SCARB1-207ENST00000541661 NCKAP5LQ9HCH0 1330 aa21.13■□□□□ 0.97
SCARB1-207ENST00000541661 CEP170BQ9Y4F5 1589 aaPredicted RBP21.12■□□□□ 0.97
SCARB1-207ENST00000541661 PKD2Q13563 968 aa21.12■□□□□ 0.97
SCARB1-207ENST00000541661 CEP162Q5TB80 1403 aa21.12■□□□□ 0.97
SCARB1-207ENST00000541661 DISP3Q9P2K9 1392 aa21.11■□□□□ 0.97
SCARB1-207ENST00000541661 TCOF1Q13428 1488 aaKnown RBP21.1■□□□□ 0.97
SCARB1-207ENST00000541661 DHX29Q7Z478 1369 aaKnown RBP21.09■□□□□ 0.97
SCARB1-207ENST00000541661 ILDR2Q71H61 639 aa21.07■□□□□ 0.96
SCARB1-207ENST00000541661 ZNF335Q9H4Z2 1342 aaPredicted RBP21.05■□□□□ 0.96
SCARB1-207ENST00000541661 A2ML1A8K2U0 1454 aa21.05■□□□□ 0.96
SCARB1-207ENST00000541661 DNMT1P26358 1616 aaKnown RBP21.04■□□□□ 0.96
SCARB1-207ENST00000541661 RSPH4AQ5TD94 716 aa21.03■□□□□ 0.96
SCARB1-207ENST00000541661 CCDC141Q6ZP82 1450 aa21.02■□□□□ 0.96
SCARB1-207ENST00000541661 FAM135AQ9P2D6 1515 aa21.02■□□□□ 0.96
SCARB1-207ENST00000541661 SPATA31D1Q6ZQQ2 1576 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms