RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 ITSN2Q9NZM3 1697 aa18.81■□□□□ 0.6
PRKAB1-206ENST00000541640 TRIM52Q96A61 297 aa18.8■□□□□ 0.6
PRKAB1-206ENST00000541640 HIRIP3Q9BW71 556 aaPredicted RBP18.79■□□□□ 0.6
PRKAB1-206ENST00000541640 CARMIL2Q6F5E8 1435 aa18.79■□□□□ 0.6
PRKAB1-206ENST00000541640 KCNH8Q96L42 1107 aa18.78■□□□□ 0.6
PRKAB1-206ENST00000541640 MPHOSPH9Q99550 1183 aa18.78■□□□□ 0.6
PRKAB1-206ENST00000541640 PLB1Q6P1J6 1458 aa18.78■□□□□ 0.6
PRKAB1-206ENST00000541640 PRG4Q92954 1404 aaPredicted RBP18.76■□□□□ 0.59
PRKAB1-206ENST00000541640 CCER2I3L3R5 266 aa18.75■□□□□ 0.59
PRKAB1-206ENST00000541640 ZNF644Q9H582 1327 aaPredicted RBP18.74■□□□□ 0.59
PRKAB1-206ENST00000541640 CAMSAP2Q08AD1 1489 aa18.74■□□□□ 0.59
PRKAB1-206ENST00000541640 ADGBQ8N7X0 1667 aa18.74■□□□□ 0.59
PRKAB1-206ENST00000541640 KIF14Q15058 1648 aa18.73■□□□□ 0.59
PRKAB1-206ENST00000541640 JPH4Q96JJ6 628 aa18.73■□□□□ 0.59
PRKAB1-206ENST00000541640 GPATCH8Q9UKJ3 1502 aaKnown RBP18.73■□□□□ 0.59
PRKAB1-206ENST00000541640 CROCC2H7BZ55 1655 aa18.72■□□□□ 0.59
PRKAB1-206ENST00000541640 ANP32CO43423 234 aa18.72■□□□□ 0.59
PRKAB1-206ENST00000541640 ABCA8O94911 1581 aa18.72■□□□□ 0.59
PRKAB1-206ENST00000541640 ANKRD30BQ9BXX2 1392 aa18.7■□□□□ 0.58
PRKAB1-206ENST00000541640 ADGRL2O95490 1459 aa18.69■□□□□ 0.58
PRKAB1-206ENST00000541640 RPRD2Q5VT52 1461 aaKnown RBP18.69■□□□□ 0.58
PRKAB1-206ENST00000541640 CFDP1Q9UEE9 299 aaPredicted RBP18.68■□□□□ 0.58
PRKAB1-206ENST00000541640 SUPT16HQ9Y5B9 1047 aaKnown RBP18.67■□□□□ 0.58
PRKAB1-206ENST00000541640 NCOA1Q15788 1441 aa18.66■□□□□ 0.58
PRKAB1-206ENST00000541640 CDC42BPAQ5VT25 1732 aa18.65■□□□□ 0.58
PRKAB1-206ENST00000541640 TEX14Q8IWB6 1497 aa18.65■□□□□ 0.58
PRKAB1-206ENST00000541640 L3MBTL2Q969R5 705 aa18.65■□□□□ 0.58
PRKAB1-206ENST00000541640 FOXD1Q16676 465 aa18.64■□□□□ 0.57
PRKAB1-206ENST00000541640 HSPA5P11021 654 aaKnown RBP18.63■□□□□ 0.57
PRKAB1-206ENST00000541640 PZPP20742 1482 aa18.63■□□□□ 0.57
PRKAB1-206ENST00000541640 CLASP1Q7Z460 1538 aa18.63■□□□□ 0.57
PRKAB1-206ENST00000541640 ABCC10Q5T3U5 1492 aa18.63■□□□□ 0.57
PRKAB1-206ENST00000541640 ATP10BO94823 1461 aa18.62■□□□□ 0.57
PRKAB1-206ENST00000541640 EIF4G2P78344 907 aaKnown RBP eCLIP18.62■□□□□ 0.57
PRKAB1-206ENST00000541640 SLC4A1APQ9BWU0 796 aaKnown RBP18.61■□□□□ 0.57
PRKAB1-206ENST00000541640 SHROOM2Q13796 1616 aa18.61■□□□□ 0.57
PRKAB1-206ENST00000541640 PLEKHD1A6NEE1 506 aa18.6■□□□□ 0.57
PRKAB1-206ENST00000541640 SHANK2Q9UPX8 1470 aa18.59■□□□□ 0.57
PRKAB1-206ENST00000541640 WASHC2AQ641Q2 1341 aa18.59■□□□□ 0.57
PRKAB1-206ENST00000541640 ANKRD30AQ9BXX3 1397 aa18.59■□□□□ 0.57
PRKAB1-206ENST00000541640 OSCARQ8IYS5 282 aa18.58■□□□□ 0.56
PRKAB1-206ENST00000541640 ZNF777Q9ULD5 760 aaPredicted RBP18.57■□□□□ 0.56
PRKAB1-206ENST00000541640 KIAA1107Q9UPP5 1409 aa18.55■□□□□ 0.56
PRKAB1-206ENST00000541640 POLR1AO95602 1720 aaPredicted RBP18.54■□□□□ 0.56
PRKAB1-206ENST00000541640 NBPF8Q3BBV2 869 aa18.54■□□□□ 0.56
PRKAB1-206ENST00000541640 ERCC6L2Q5T890 1561 aa18.53■□□□□ 0.56
PRKAB1-206ENST00000541640 CNTLNQ9NXG0 1405 aa18.53■□□□□ 0.56
PRKAB1-206ENST00000541640 ANKRD50Q9ULJ7 1429 aa18.53■□□□□ 0.56
PRKAB1-206ENST00000541640 ARHGEF5Q12774 1597 aa18.52■□□□□ 0.56
PRKAB1-206ENST00000541640 MBD5Q9P267 1494 aa18.52■□□□□ 0.55
PRKAB1-206ENST00000541640 PTPRGP23470 1445 aa18.51■□□□□ 0.55
PRKAB1-206ENST00000541640 C9orf84Q5VXU9 1444 aa18.51■□□□□ 0.55
PRKAB1-206ENST00000541640 SPATA31E1Q6ZUB1 1445 aa18.51■□□□□ 0.55
PRKAB1-206ENST00000541640 CCDC7Q96M83 1385 aa18.5■□□□□ 0.55
PRKAB1-206ENST00000541640 KDM5DQ9BY66 1539 aa18.5■□□□□ 0.55
PRKAB1-206ENST00000541640 PREX2Q70Z35 1606 aa18.48■□□□□ 0.55
PRKAB1-206ENST00000541640 CDC42BPBQ9Y5S2 1711 aa18.46■□□□□ 0.55
PRKAB1-206ENST00000541640 C11orf95C9JLR9 678 aaPredicted RBP18.46■□□□□ 0.55
PRKAB1-206ENST00000541640 PKD2Q13563 968 aa18.45■□□□□ 0.54
PRKAB1-206ENST00000541640 SAMD9LQ8IVG5 1584 aa18.45■□□□□ 0.54
PRKAB1-206ENST00000541640 TSPY4P0CV99 314 aa18.44■□□□□ 0.54
PRKAB1-206ENST00000541640 TSPY10P0CW01 314 aa18.44■□□□□ 0.54
PRKAB1-206ENST00000541640 MYT1Q01538 1121 aa18.44■□□□□ 0.54
PRKAB1-206ENST00000541640 CCDC141Q6ZP82 1450 aa18.42■□□□□ 0.54
PRKAB1-206ENST00000541640 NUP155O75694 1391 aa18.41■□□□□ 0.54
PRKAB1-206ENST00000541640 KIF15Q9NS87 1388 aa18.4■□□□□ 0.54
PRKAB1-206ENST00000541640 KIF7Q2M1P5 1343 aa18.4■□□□□ 0.54
PRKAB1-206ENST00000541640 UHRF1BP1Q6BDS2 1440 aa18.39■□□□□ 0.54
PRKAB1-206ENST00000541640 ARHGEF12Q9NZN5 1544 aa18.39■□□□□ 0.54
PRKAB1-206ENST00000541640 HNRNPMP52272 730 aaKnown RBP eCLIP18.39■□□□□ 0.53
PRKAB1-206ENST00000541640 FKBP8Q14318 412 aa18.39■□□□□ 0.53
PRKAB1-206ENST00000541640 RSPH4AQ5TD94 716 aa18.39■□□□□ 0.53
PRKAB1-206ENST00000541640 KDM5CP41229 1560 aa18.37■□□□□ 0.53
PRKAB1-206ENST00000541640 MAST1Q9Y2H9 1570 aa18.37■□□□□ 0.53
PRKAB1-206ENST00000541640 PRKRIP1Q9H875 184 aaPredicted RBP18.37■□□□□ 0.53
PRKAB1-206ENST00000541640 ABCC2Q92887 1545 aa18.36■□□□□ 0.53
PRKAB1-206ENST00000541640 TTC37Q6PGP7 1564 aa18.36■□□□□ 0.53
PRKAB1-206ENST00000541640 NEFLP07196 543 aa18.35■□□□□ 0.53
PRKAB1-206ENST00000541640 RALGAPBQ86X10 1494 aa18.35■□□□□ 0.53
PRKAB1-206ENST00000541640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.35■□□□□ 0.531e-17■■■□□ 18.3
PRKAB1-206ENST00000541640 BCORL1Q5H9F3 1711 aa18.35■□□□□ 0.53
PRKAB1-206ENST00000541640 USP47Q96K76 1375 aa18.34■□□□□ 0.53
PRKAB1-206ENST00000541640 HNRNPUQ00839 825 aaKnown RBP eCLIP18.34■□□□□ 0.53
PRKAB1-206ENST00000541640 SYCP2Q9BX26 1530 aa18.33■□□□□ 0.52
PRKAB1-206ENST00000541640 MYO5CQ9NQX4 1742 aa18.33■□□□□ 0.52
PRKAB1-206ENST00000541640 FAM135AQ9P2D6 1515 aa18.32■□□□□ 0.52
PRKAB1-206ENST00000541640 ARHGAP5Q13017 1502 aa18.32■□□□□ 0.52
PRKAB1-206ENST00000541640 ARID4BQ4LE39 1312 aaPredicted RBP18.32■□□□□ 0.52
PRKAB1-206ENST00000541640 UNC13BO14795 1591 aa18.31■□□□□ 0.52
PRKAB1-206ENST00000541640 PLXNC1O60486 1568 aa18.3■□□□□ 0.52
PRKAB1-206ENST00000541640 CCDC184Q52MB2 194 aa18.29■□□□□ 0.52
PRKAB1-206ENST00000541640 PLEKHH2Q8IVE3 1493 aa18.29■□□□□ 0.52
PRKAB1-206ENST00000541640 BCANQ96GW7 911 aa18.28■□□□□ 0.52
PRKAB1-206ENST00000541640 ZNF326Q5BKZ1 582 aaKnown RBP18.27■□□□□ 0.52
PRKAB1-206ENST00000541640 TSHZ2Q9NRE2 1034 aa18.27■□□□□ 0.52
PRKAB1-206ENST00000541640 DHX29Q7Z478 1369 aaKnown RBP18.27■□□□□ 0.51
PRKAB1-206ENST00000541640 UHRF1BP1LA0JNW5 1464 aa18.25■□□□□ 0.51
PRKAB1-206ENST00000541640 MRS2Q9HD23 443 aa18.24■□□□□ 0.51
PRKAB1-206ENST00000541640 ZCCHC11Q5TAX3 1644 aaKnown RBP18.24■□□□□ 0.51
PRKAB1-206ENST00000541640 IQGAP3Q86VI3 1631 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms