RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 ILDR1Q86SU0 546 aaPredicted RBP9.83□□□□□ -0.84
CDKN3-206ENST00000541304 L3MBTL3Q96JM7 780 aaPredicted RBP9.82□□□□□ -0.84
CDKN3-206ENST00000541304 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.82□□□□□ -0.84
CDKN3-206ENST00000541304 MMRN1Q13201 1228 aa9.81□□□□□ -0.84
CDKN3-206ENST00000541304 C3orf67Q6ZVT6 689 aa9.81□□□□□ -0.84
CDKN3-206ENST00000541304 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.79□□□□□ -0.84
CDKN3-206ENST00000541304 ZFP91Q96JP5 570 aaPredicted RBP9.79□□□□□ -0.84
CDKN3-206ENST00000541304 TAOK2Q9UL54 1235 aa9.78□□□□□ -0.84
CDKN3-206ENST00000541304 ECM2O94769 699 aaPredicted RBP9.77□□□□□ -0.85
CDKN3-206ENST00000541304 EFCAB3Q8N7B9 438 aa9.77□□□□□ -0.85
CDKN3-206ENST00000541304 FANCD2Q9BXW9 1451 aa9.77□□□□□ -0.85
CDKN3-206ENST00000541304 CEP164Q9UPV0 1460 aa9.77□□□□□ -0.85
CDKN3-206ENST00000541304 G3V3G9 751 aa9.76□□□□□ -0.85
CDKN3-206ENST00000541304 ABCC8Q09428 1581 aa9.75□□□□□ -0.85
CDKN3-206ENST00000541304 NESP48681 1621 aa9.74□□□□□ -0.85
CDKN3-206ENST00000541304 DPY19L2Q6NUT2 758 aa9.73□□□□□ -0.85
CDKN3-206ENST00000541304 BOLA1Q9Y3E2 137 aa9.73□□□□□ -0.85
CDKN3-206ENST00000541304 ERCC6Q03468 1493 aa9.72□□□□□ -0.85
CDKN3-206ENST00000541304 SNPHO15079 494 aa9.71□□□□□ -0.86
CDKN3-206ENST00000541304 SOX12O15370 315 aa9.71□□□□□ -0.86
CDKN3-206ENST00000541304 PKD2Q13563 968 aa9.71□□□□□ -0.86
CDKN3-206ENST00000541304 SPNS2Q8IVW8 549 aa9.71□□□□□ -0.86
CDKN3-206ENST00000541304 WRNQ14191 1432 aaPredicted RBP eCLIP9.7□□□□□ -0.86
CDKN3-206ENST00000541304 BCL11BQ9C0K0 894 aaPredicted RBP9.69□□□□□ -0.86
CDKN3-206ENST00000541304 MRC2Q9UBG0 1479 aa9.69□□□□□ -0.86
CDKN3-206ENST00000541304 DNMBPQ6XZF7 1577 aa9.68□□□□□ -0.86
CDKN3-206ENST00000541304 KIF21AQ7Z4S6 1674 aa9.67□□□□□ -0.86
CDKN3-206ENST00000541304 ST18O60284 1047 aa9.67□□□□□ -0.86
CDKN3-206ENST00000541304 STK24Q9Y6E0 443 aa9.67□□□□□ -0.86
CDKN3-206ENST00000541304 TOP2BQ02880 1626 aa9.67□□□□□ -0.86
CDKN3-206ENST00000541304 BIVM-ERCC5R4GMW8 1640 aa9.67□□□□□ -0.86
CDKN3-206ENST00000541304 STK25O00506 426 aa9.66□□□□□ -0.86
CDKN3-206ENST00000541304 RGL2O15211 777 aa9.66□□□□□ -0.86
CDKN3-206ENST00000541304 WDR62O43379 1518 aa9.66□□□□□ -0.86
CDKN3-206ENST00000541304 TMEM121BQ9BXQ6 578 aaPredicted RBP9.65□□□□□ -0.86
CDKN3-206ENST00000541304 PHF8Q9UPP1 1060 aa9.65□□□□□ -0.86
CDKN3-206ENST00000541304 THOC2Q8NI27 1593 aaKnown RBP9.64□□□□□ -0.87
CDKN3-206ENST00000541304 TOPBP1Q92547 1522 aa9.63□□□□□ -0.87
CDKN3-206ENST00000541304 MS4A4AQ96JQ5 239 aa9.63□□□□□ -0.87
CDKN3-206ENST00000541304 CUX1P39880 1505 aa9.62□□□□□ -0.87
CDKN3-206ENST00000541304 NLRP6P59044 892 aa9.62□□□□□ -0.87
CDKN3-206ENST00000541304 MICALL2Q8IY33 904 aa9.62□□□□□ -0.87
CDKN3-206ENST00000541304 URB2Q14146 1524 aaKnown RBP9.61□□□□□ -0.87
CDKN3-206ENST00000541304 SYNJ1O43426 1573 aa9.61□□□□□ -0.87
CDKN3-206ENST00000541304 WDR97A6NE52 1622 aa9.6□□□□□ -0.87
CDKN3-206ENST00000541304 CUX2O14529 1486 aa9.59□□□□□ -0.87
CDKN3-206ENST00000541304 FBXO22Q8NEZ5 403 aa9.59□□□□□ -0.87
CDKN3-206ENST00000541304 MFRPQ9BY79 579 aa9.57□□□□□ -0.88
CDKN3-206ENST00000541304 POLA1P09884 1462 aaPredicted RBP9.57□□□□□ -0.88
CDKN3-206ENST00000541304 FGD5Q6ZNL6 1462 aa9.57□□□□□ -0.88
CDKN3-206ENST00000541304 EEA1Q15075 1411 aa9.56□□□□□ -0.88
CDKN3-206ENST00000541304 IFT140Q96RY7 1462 aa9.56□□□□□ -0.88
CDKN3-206ENST00000541304 ABCA10Q8WWZ4 1543 aa9.54□□□□□ -0.88
CDKN3-206ENST00000541304 EMP3P54852 163 aa9.53□□□□□ -0.88
CDKN3-206ENST00000541304 DOK7Q18PE1 504 aa9.53□□□□□ -0.88
CDKN3-206ENST00000541304 MARVELD3Q96A59 401 aa9.53□□□□□ -0.88
CDKN3-206ENST00000541304 SOGA1O94964 1423 aa9.52□□□□□ -0.89
CDKN3-206ENST00000541304 HOXB3P14651 431 aaPredicted RBP9.52□□□□□ -0.89
CDKN3-206ENST00000541304 TMEM92Q6UXU6 159 aa9.51□□□□□ -0.89
CDKN3-206ENST00000541304 KIF27Q86VH2 1401 aa9.5□□□□□ -0.89
CDKN3-206ENST00000541304 TARBP1Q13395 1621 aaKnown RBP9.5□□□□□ -0.89
CDKN3-206ENST00000541304 HS6ST3Q8IZP7 471 aa9.5□□□□□ -0.89
CDKN3-206ENST00000541304 ZNF710Q8N1W2 664 aa9.5□□□□□ -0.89
CDKN3-206ENST00000541304 RIMBP2O15034 1052 aa9.49□□□□□ -0.89
CDKN3-206ENST00000541304 ABCA5Q8WWZ7 1642 aa9.47□□□□□ -0.89
CDKN3-206ENST00000541304 ERICH3Q5RHP9 1530 aa9.46□□□□□ -0.89
CDKN3-206ENST00000541304 RAD54L2Q9Y4B4 1467 aa9.45□□□□□ -0.9
CDKN3-206ENST00000541304 HOXB1P14653 301 aaPredicted RBP9.44□□□□□ -0.9
CDKN3-206ENST00000541304 ZSWIM6Q9HCJ5 1215 aa9.44□□□□□ -0.9
CDKN3-206ENST00000541304 GAPVD1Q14C86 1478 aa9.44□□□□□ -0.9
CDKN3-206ENST00000541304 CUL7Q14999 1698 aa9.43□□□□□ -0.9
CDKN3-206ENST00000541304 EIF4G3O43432 1585 aaKnown RBP9.43□□□□□ -0.9
CDKN3-206ENST00000541304 GRIN2BQ13224 1484 aa9.43□□□□□ -0.9
CDKN3-206ENST00000541304 FAM205CA6NFA0 338 aa9.43□□□□□ -0.9
CDKN3-206ENST00000541304 CHGAP10645 457 aaKnown RBP9.43□□□□□ -0.9
CDKN3-206ENST00000541304 HS3ST6Q96QI5 342 aa9.43□□□□□ -0.9
CDKN3-206ENST00000541304 MAGI1Q96QZ7 1491 aaPredicted RBP9.41□□□□□ -0.9
CDKN3-206ENST00000541304 KIF3CO14782 793 aa9.39□□□□□ -0.91
CDKN3-206ENST00000541304 PBRM1Q86U86 1689 aa9.39□□□□□ -0.91
CDKN3-206ENST00000541304 KIF21BO75037 1637 aa9.38□□□□□ -0.91
CDKN3-206ENST00000541304 TDRD9Q8NDG6 1382 aaKnown RBP9.38□□□□□ -0.91
CDKN3-206ENST00000541304 ZNF608Q9ULD9 1512 aaPredicted RBP9.38□□□□□ -0.91
CDKN3-206ENST00000541304 C2orf72A6NCS6 295 aa9.38□□□□□ -0.91
CDKN3-206ENST00000541304 DNAJC5Q9H3Z4 198 aa9.38□□□□□ -0.91
CDKN3-206ENST00000541304 PPP1R37O75864 691 aa9.37□□□□□ -0.91
CDKN3-206ENST00000541304 TMC2Q8TDI7 906 aa9.37□□□□□ -0.91
CDKN3-206ENST00000541304 FHAD1B1AJZ9 1412 aa9.37□□□□□ -0.91
CDKN3-206ENST00000541304 IGF1RP08069 1367 aa9.37□□□□□ -0.91
CDKN3-206ENST00000541304 ERBB3P21860 1342 aa9.36□□□□□ -0.91
CDKN3-206ENST00000541304 AQRO60306 1485 aaKnown RBP eCLIP9.36□□□□□ -0.91
CDKN3-206ENST00000541304 PRXQ9BXM0 1461 aa9.36□□□□□ -0.91
CDKN3-206ENST00000541304 POTEB3A0JP26 581 aa9.36□□□□□ -0.91
CDKN3-206ENST00000541304 POTEBQ6S5H4 581 aa9.36□□□□□ -0.91
CDKN3-206ENST00000541304 ADAMTS12P58397 1594 aa9.36□□□□□ -0.91
CDKN3-206ENST00000541304 RYDENQ9NUL5 291 aaKnown RBP9.35□□□□□ -0.91
CDKN3-206ENST00000541304 SYNJ2O15056 1496 aa9.34□□□□□ -0.91
CDKN3-206ENST00000541304 RAPGEF2Q9Y4G8 1499 aa9.34□□□□□ -0.91
CDKN3-206ENST00000541304 GPR153Q6NV75 609 aa9.34□□□□□ -0.91
CDKN3-206ENST00000541304 CARMIL1Q5VZK9 1371 aa9.34□□□□□ -0.91
CDKN3-206ENST00000541304 GOLGA3Q08378 1498 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms