RNA–Protein interactions for RNA: ENST00000541132.1

RAD9A-206, Transcript of RAD9 checkpoint clamp component A, humanhuman

TSL 3

Gene RAD9A, Length 586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-206ENST00000541132 PLCH2O75038 1416 aa29.97■■■□□ 2.39
RAD9A-206ENST00000541132 ATP1B4Q9UN42 357 aaPredicted RBP29.97■■■□□ 2.39
RAD9A-206ENST00000541132 FER1L4A9Z1Z3 1794 aa29.96■■■□□ 2.39
RAD9A-206ENST00000541132 EHMT2Q96KQ7 1210 aa29.93■■■□□ 2.38
RAD9A-206ENST00000541132 MYO5CQ9NQX4 1742 aa29.91■■■□□ 2.38
RAD9A-206ENST00000541132 UBTFP17480 764 aaKnown RBP29.91■■■□□ 2.38
RAD9A-206ENST00000541132 EFCAB2Q5VUJ9 269 aa29.89■■■□□ 2.38
RAD9A-206ENST00000541132 FMN1Q68DA7 1419 aa29.88■■■□□ 2.37
RAD9A-206ENST00000541132 ATP10AO60312 1499 aa29.87■■■□□ 2.37
RAD9A-206ENST00000541132 CDK11AQ9UQ88 783 aaPredicted RBP29.86■■■□□ 2.37
RAD9A-206ENST00000541132 C9orf84Q5VXU9 1444 aa29.84■■■□□ 2.37
RAD9A-206ENST00000541132 KIF14Q15058 1648 aa29.82■■■□□ 2.36
RAD9A-206ENST00000541132 ARHGEF12Q9NZN5 1544 aa29.81■■■□□ 2.36
RAD9A-206ENST00000541132 ARHGAP35Q9NRY4 1499 aa29.81■■■□□ 2.36
RAD9A-206ENST00000541132 PREX1Q8TCU6 1659 aa29.77■■■□□ 2.36
RAD9A-206ENST00000541132 CERKQ8TCT0 537 aa29.77■■■□□ 2.36
RAD9A-206ENST00000541132 ARHGAP5Q13017 1502 aa29.76■■■□□ 2.36
RAD9A-206ENST00000541132 ZNF518AQ6AHZ1 1483 aa29.76■■■□□ 2.35
RAD9A-206ENST00000541132 CEBPAP49715 358 aaPredicted RBP29.75■■■□□ 2.35
RAD9A-206ENST00000541132 TROQ12816 1431 aaPredicted RBP29.75■■■□□ 2.35
RAD9A-206ENST00000541132 MYT1LQ9UL68 1186 aa29.75■■■□□ 2.35
RAD9A-206ENST00000541132 CLIP1P30622 1438 aa29.73■■■□□ 2.35
RAD9A-206ENST00000541132 AFAP1Q8N556 730 aa29.73■■■□□ 2.35
RAD9A-206ENST00000541132 LRRIQ1Q96JM4 1722 aa29.71■■■□□ 2.35
RAD9A-206ENST00000541132 KDM5CP41229 1560 aa29.7■■■□□ 2.35
RAD9A-206ENST00000541132 CDC42BPBQ9Y5S2 1711 aa29.67■■■□□ 2.34
RAD9A-206ENST00000541132 DIP2CQ9Y2E4 1556 aa29.65■■■□□ 2.34
RAD9A-206ENST00000541132 SETD1BQ9UPS6 1966 aaKnown RBP29.63■■■□□ 2.33
RAD9A-206ENST00000541132 UHRF1BP1Q6BDS2 1440 aa29.62■■■□□ 2.33
RAD9A-206ENST00000541132 DMRT2Q9Y5R5 561 aa29.61■■■□□ 2.33
RAD9A-206ENST00000541132 STRCQ7RTU9 1775 aa29.61■■■□□ 2.33
RAD9A-206ENST00000541132 REREQ9P2R6 1566 aa29.6■■■□□ 2.33
RAD9A-206ENST00000541132 ABCA6Q8N139 1617 aa29.6■■■□□ 2.33
RAD9A-206ENST00000541132 MLH3Q9UHC1 1453 aa29.59■■■□□ 2.33
RAD9A-206ENST00000541132 PREX2Q70Z35 1606 aa29.58■■■□□ 2.33
RAD9A-206ENST00000541132 CHIC1Q5VXU3 224 aa29.56■■■□□ 2.32
RAD9A-206ENST00000541132 ESF1Q9H501 851 aaKnown RBP29.56■■■□□ 2.32
RAD9A-206ENST00000541132 C3P01024 1663 aa29.56■■■□□ 2.32
RAD9A-206ENST00000541132 ITSN2Q9NZM3 1697 aa29.55■■■□□ 2.32
RAD9A-206ENST00000541132 TRAPPC8Q9Y2L5 1435 aa29.54■■■□□ 2.32
RAD9A-206ENST00000541132 ABCC1P33527 1531 aa29.54■■■□□ 2.32
RAD9A-206ENST00000541132 CCDC18Q5T9S5 1454 aa29.54■■■□□ 2.32
RAD9A-206ENST00000541132 AGLP35573 1532 aa29.51■■■□□ 2.32
RAD9A-206ENST00000541132 CASKIN1Q8WXD9 1431 aa29.51■■■□□ 2.31
RAD9A-206ENST00000541132 CDC42BPAQ5VT25 1732 aa29.49■■■□□ 2.31
RAD9A-206ENST00000541132 KIDINS220Q9ULH0 1771 aa29.48■■■□□ 2.31
RAD9A-206ENST00000541132 PTPRTO14522 1441 aa29.43■■■□□ 2.3
RAD9A-206ENST00000541132 ZNF777Q9ULD5 760 aaPredicted RBP29.42■■■□□ 2.3
RAD9A-206ENST00000541132 CNTLNQ9NXG0 1405 aa29.4■■■□□ 2.3
RAD9A-206ENST00000541132 SAMD9LQ8IVG5 1584 aa29.38■■■□□ 2.29
RAD9A-206ENST00000541132 FYCO1Q9BQS8 1478 aa29.36■■■□□ 2.29
RAD9A-206ENST00000541132 DISP3Q9P2K9 1392 aa29.34■■■□□ 2.29
RAD9A-206ENST00000541132 SPAG9O60271 1321 aaKnown RBP29.33■■■□□ 2.29
RAD9A-206ENST00000541132 SYCP2Q9BX26 1530 aa29.33■■■□□ 2.29
RAD9A-206ENST00000541132 MROH2AA6NES4 1674 aa29.33■■■□□ 2.29
RAD9A-206ENST00000541132 SUPT6HQ7KZ85 1726 aaKnown RBP29.33■■■□□ 2.29
RAD9A-206ENST00000541132 HNRNPMP52272 730 aaKnown RBP eCLIP29.32■■■□□ 2.28
RAD9A-206ENST00000541132 GPATCH8Q9UKJ3 1502 aaKnown RBP29.31■■■□□ 2.28
RAD9A-206ENST00000541132 NCOA1Q15788 1441 aa29.31■■■□□ 2.28
RAD9A-206ENST00000541132 ZMYM3Q14202 1370 aa29.28■■■□□ 2.28
RAD9A-206ENST00000541132 LTBP4Q8N2S1 1624 aa29.28■■■□□ 2.28
RAD9A-206ENST00000541132 NPATQ14207 1427 aa29.28■■■□□ 2.28
RAD9A-206ENST00000541132 CAMSAP1Q5T5Y3 1602 aa29.27■■■□□ 2.28
RAD9A-206ENST00000541132 ATP7AQ04656 1500 aa29.25■■■□□ 2.27
RAD9A-206ENST00000541132 CLTCQ00610 1675 aaKnown RBP29.25■■■□□ 2.27
RAD9A-206ENST00000541132 ILDR2Q71H61 639 aa29.24■■■□□ 2.27
RAD9A-206ENST00000541132 CFDP1Q9UEE9 299 aaPredicted RBP29.24■■■□□ 2.27
RAD9A-206ENST00000541132 KIAA1107Q9UPP5 1409 aa29.22■■■□□ 2.27
RAD9A-206ENST00000541132 IQSEC2Q5JU85 1478 aa29.22■■■□□ 2.27
RAD9A-206ENST00000541132 PLEKHH2Q8IVE3 1493 aa29.22■■■□□ 2.27
RAD9A-206ENST00000541132 CCNB3Q8WWL7 1395 aa29.21■■■□□ 2.27
RAD9A-206ENST00000541132 A2MP01023 1474 aa29.2■■■□□ 2.26
RAD9A-206ENST00000541132 INO80Q9ULG1 1556 aaPredicted RBP29.2■■■□□ 2.26
RAD9A-206ENST00000541132 NCKAP5LQ9HCH0 1330 aa29.19■■■□□ 2.26
RAD9A-206ENST00000541132 PLXNC1O60486 1568 aa29.18■■■□□ 2.26
RAD9A-206ENST00000541132 GGT6Q6P531 493 aa29.17■■■□□ 2.26
RAD9A-206ENST00000541132 MYO3AQ8NEV4 1616 aa29.16■■■□□ 2.26
RAD9A-206ENST00000541132 MTUS2Q5JR59 1369 aa29.15■■■□□ 2.26
RAD9A-206ENST00000541132 SPATA31D1Q6ZQQ2 1576 aa29.15■■■□□ 2.26
RAD9A-206ENST00000541132 ZNF142P52746 1687 aaPredicted RBP29.14■■■□□ 2.26
RAD9A-206ENST00000541132 ADGBQ8N7X0 1667 aa29.12■■■□□ 2.25
RAD9A-206ENST00000541132 SOCS7O14512 581 aa29.12■■■□□ 2.25
RAD9A-206ENST00000541132 PTPRKQ15262 1439 aa29.11■■■□□ 2.25
RAD9A-206ENST00000541132 CEP170BQ9Y4F5 1589 aaPredicted RBP29.1■■■□□ 2.25
RAD9A-206ENST00000541132 PKD2Q13563 968 aa29.1■■■□□ 2.25
RAD9A-206ENST00000541132 ZNF335Q9H4Z2 1342 aaPredicted RBP29.1■■■□□ 2.25
RAD9A-206ENST00000541132 PLA2R1Q13018 1463 aa29.09■■■□□ 2.25
RAD9A-206ENST00000541132 PPP6R1Q9UPN7 881 aa29.07■■■□□ 2.24
RAD9A-206ENST00000541132 ZNF644Q9H582 1327 aaPredicted RBP29.06■■■□□ 2.24
RAD9A-206ENST00000541132 TIAM1Q13009 1591 aa29.05■■■□□ 2.24
RAD9A-206ENST00000541132 UBAP1LF5GYI3 381 aa29.04■■■□□ 2.24
RAD9A-206ENST00000541132 TCOF1Q13428 1488 aaKnown RBP29.04■■■□□ 2.24
RAD9A-206ENST00000541132 MBD5Q9P267 1494 aa29.01■■■□□ 2.23
RAD9A-206ENST00000541132 EHBP1L1Q8N3D4 1523 aa29■■■□□ 2.23
RAD9A-206ENST00000541132 RTEL1-TNFRSF6BF6WH68 1400 aa28.98■■■□□ 2.23
RAD9A-206ENST00000541132 A2ML1A8K2U0 1454 aa28.97■■■□□ 2.23
RAD9A-206ENST00000541132 DNMT1P26358 1616 aaKnown RBP28.96■■■□□ 2.23
RAD9A-206ENST00000541132 DHX29Q7Z478 1369 aaKnown RBP28.96■■■□□ 2.23
RAD9A-206ENST00000541132 CEP162Q5TB80 1403 aa28.94■■■□□ 2.22
RAD9A-206ENST00000541132 KIF3BO15066 747 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms