RNA–Protein interactions for RNA: ENST00000540768.5

NUP85-203, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-203ENST00000540768 ABCC10Q5T3U5 1492 aa14.18□□□□□ -0.14
NUP85-203ENST00000540768 PTPRGP23470 1445 aa14.18□□□□□ -0.14
NUP85-203ENST00000540768 RRP7BPQ9NSQ0 103 aa14.18□□□□□ -0.14
NUP85-203ENST00000540768 DENND4BO75064 1496 aaPredicted RBP14.18□□□□□ -0.14
NUP85-203ENST00000540768 TONSLQ96HA7 1378 aa14.18□□□□□ -0.14
NUP85-203ENST00000540768 KDM6BO15054 1643 aa14.17□□□□□ -0.14
NUP85-203ENST00000540768 CHIC2Q9UKJ5 165 aa14.17□□□□□ -0.14
NUP85-203ENST00000540768 KDM5BQ9UGL1 1544 aa14.17□□□□□ -0.14
NUP85-203ENST00000540768 CARMIL2Q6F5E8 1435 aa14.15□□□□□ -0.14
NUP85-203ENST00000540768 ADCY10Q96PN6 1610 aa14.14□□□□□ -0.15
NUP85-203ENST00000540768 DAPK1P53355 1430 aa14.14□□□□□ -0.15
NUP85-203ENST00000540768 ROCK1Q13464 1354 aa14.14□□□□□ -0.15
NUP85-203ENST00000540768 DNMT1P26358 1616 aaKnown RBP14.13□□□□□ -0.15
NUP85-203ENST00000540768 ABCC5O15440 1437 aa14.13□□□□□ -0.15
NUP85-203ENST00000540768 DDX10Q13206 875 aaKnown RBP14.12□□□□□ -0.15
NUP85-203ENST00000540768 PELP1Q8IZL8 1130 aaKnown RBP14.12□□□□□ -0.15
NUP85-203ENST00000540768 CDK11AQ9UQ88 783 aaPredicted RBP14.12□□□□□ -0.15
NUP85-203ENST00000540768 TROQ12816 1431 aaPredicted RBP14.12□□□□□ -0.15
NUP85-203ENST00000540768 PLB1Q6P1J6 1458 aa14.11□□□□□ -0.15
NUP85-203ENST00000540768 KIF13AQ9H1H9 1805 aa14.1□□□□□ -0.15
NUP85-203ENST00000540768 ZNF644Q9H582 1327 aaPredicted RBP14.09□□□□□ -0.15
NUP85-203ENST00000540768 MPHOSPH9Q99550 1183 aa14.09□□□□□ -0.15
NUP85-203ENST00000540768 TRIM52Q96A61 297 aa14.08□□□□□ -0.16
NUP85-203ENST00000540768 HIRIP3Q9BW71 556 aaPredicted RBP14.08□□□□□ -0.16
NUP85-203ENST00000540768 DIP2BQ9P265 1576 aa14.08□□□□□ -0.16
NUP85-203ENST00000540768 KCNH8Q96L42 1107 aa14.07□□□□□ -0.16
NUP85-203ENST00000540768 ABCC2Q92887 1545 aa14.06□□□□□ -0.16
NUP85-203ENST00000540768 GPATCH8Q9UKJ3 1502 aaKnown RBP14.06□□□□□ -0.16
NUP85-203ENST00000540768 ITSN2Q9NZM3 1697 aa14.06□□□□□ -0.16
NUP85-203ENST00000540768 ABCA8O94911 1581 aa14.05□□□□□ -0.16
NUP85-203ENST00000540768 KIF14Q15058 1648 aa14.05□□□□□ -0.16
NUP85-203ENST00000540768 CAMSAP2Q08AD1 1489 aa14.05□□□□□ -0.16
NUP85-203ENST00000540768 ASXL2Q76L83 1435 aa14.04□□□□□ -0.16
NUP85-203ENST00000540768 CFDP1Q9UEE9 299 aaPredicted RBP14.02□□□□□ -0.16
NUP85-203ENST00000540768 ANKRD30BQ9BXX2 1392 aa14.02□□□□□ -0.16
NUP85-203ENST00000540768 UHRF1BP1LA0JNW5 1464 aa14□□□□□ -0.17
NUP85-203ENST00000540768 ADGRL2O95490 1459 aa14□□□□□ -0.17
NUP85-203ENST00000540768 NCOA1Q15788 1441 aa14□□□□□ -0.17
NUP85-203ENST00000540768 CCER2I3L3R5 266 aa14□□□□□ -0.17
NUP85-203ENST00000540768 ADGBQ8N7X0 1667 aa14□□□□□ -0.17
NUP85-203ENST00000540768 ATP10BO94823 1461 aa14□□□□□ -0.17
NUP85-203ENST00000540768 CROCC2H7BZ55 1655 aa14□□□□□ -0.17
NUP85-203ENST00000540768 FOXD1Q16676 465 aa14□□□□□ -0.17
NUP85-203ENST00000540768 RPRD2Q5VT52 1461 aaKnown RBP13.99□□□□□ -0.17
NUP85-203ENST00000540768 KDM4FA0A1W2PPD8 638 aa13.98□□□□□ -0.17
NUP85-203ENST00000540768 L3MBTL2Q969R5 705 aa13.98□□□□□ -0.17
NUP85-203ENST00000540768 PZPP20742 1482 aa13.98□□□□□ -0.17
NUP85-203ENST00000540768 ANP32CO43423 234 aa13.97□□□□□ -0.17
NUP85-203ENST00000540768 TEX14Q8IWB6 1497 aa13.96□□□□□ -0.17
NUP85-203ENST00000540768 PLEKHD1A6NEE1 506 aa13.96□□□□□ -0.17
NUP85-203ENST00000540768 CDC42BPAQ5VT25 1732 aa13.96□□□□□ -0.17
NUP85-203ENST00000540768 HSPA5P11021 654 aaKnown RBP13.96□□□□□ -0.18
NUP85-203ENST00000540768 SLC4A1APQ9BWU0 796 aaKnown RBP13.95□□□□□ -0.18
NUP85-203ENST00000540768 ZNF777Q9ULD5 760 aaPredicted RBP13.94□□□□□ -0.18
NUP85-203ENST00000540768 TSPOAP1O95153 1857 aa13.94□□□□□ -0.18
NUP85-203ENST00000540768 ANKRD30AQ9BXX3 1397 aa13.93□□□□□ -0.18
NUP85-203ENST00000540768 SHANK2Q9UPX8 1470 aa13.92□□□□□ -0.18
NUP85-203ENST00000540768 SUPT16HQ9Y5B9 1047 aaKnown RBP13.92□□□□□ -0.18
NUP85-203ENST00000540768 WASHC2AQ641Q2 1341 aa13.92□□□□□ -0.18
NUP85-203ENST00000540768 GLI2P10070 1586 aa13.92□□□□□ -0.18
NUP85-203ENST00000540768 EIF4G2P78344 907 aaKnown RBP eCLIP13.92□□□□□ -0.18
NUP85-203ENST00000540768 NBPF8Q3BBV2 869 aa13.91□□□□□ -0.18
NUP85-203ENST00000540768 KIAA1107Q9UPP5 1409 aa13.9□□□□□ -0.18
NUP85-203ENST00000540768 COL17A1Q9UMD9 1497 aaPredicted RBP13.89□□□□□ -0.19
NUP85-203ENST00000540768 C9orf84Q5VXU9 1444 aa13.89□□□□□ -0.19
NUP85-203ENST00000540768 ANKRD50Q9ULJ7 1429 aa13.89□□□□□ -0.19
NUP85-203ENST00000540768 WDR7Q9Y4E6 1490 aa13.87□□□□□ -0.19
NUP85-203ENST00000540768 ARHGEF5Q12774 1597 aa13.87□□□□□ -0.19
NUP85-203ENST00000540768 SPATA31E1Q6ZUB1 1445 aa13.87□□□□□ -0.19
NUP85-203ENST00000540768 MBD5Q9P267 1494 aa13.87□□□□□ -0.19
NUP85-203ENST00000540768 ZCCHC11Q5TAX3 1644 aaKnown RBP13.86□□□□□ -0.19
NUP85-203ENST00000540768 C11orf95C9JLR9 678 aaPredicted RBP13.85□□□□□ -0.19
NUP85-203ENST00000540768 KDM5DQ9BY66 1539 aa13.85□□□□□ -0.19
NUP85-203ENST00000540768 CNTLNQ9NXG0 1405 aa13.84□□□□□ -0.19
NUP85-203ENST00000540768 CCDC7Q96M83 1385 aa13.84□□□□□ -0.19
NUP85-203ENST00000540768 PKD2Q13563 968 aa13.84□□□□□ -0.19
NUP85-203ENST00000540768 CD109Q6YHK3 1445 aa13.84□□□□□ -0.19
NUP85-203ENST00000540768 CDC42BPBQ9Y5S2 1711 aa13.83□□□□□ -0.19
NUP85-203ENST00000540768 PPRC1Q5VV67 1664 aaKnown RBP13.83□□□□□ -0.19
NUP85-203ENST00000540768 PREX2Q70Z35 1606 aa13.83□□□□□ -0.19
NUP85-203ENST00000540768 SAMD9LQ8IVG5 1584 aa13.83□□□□□ -0.2
NUP85-203ENST00000540768 TSPY4P0CV99 314 aa13.82□□□□□ -0.2
NUP85-203ENST00000540768 TSPY10P0CW01 314 aa13.82□□□□□ -0.2
NUP85-203ENST00000540768 MAP3K4Q9Y6R4 1608 aa13.82□□□□□ -0.2
NUP85-203ENST00000540768 HNRNPMP52272 730 aaKnown RBP eCLIP13.82□□□□□ -0.28e-10■■■■■ 34.4
NUP85-203ENST00000540768 NUP155O75694 1391 aa13.81□□□□□ -0.2
NUP85-203ENST00000540768 POLR1AO95602 1720 aaPredicted RBP13.81□□□□□ -0.2
NUP85-203ENST00000540768 KIF15Q9NS87 1388 aa13.8□□□□□ -0.2
NUP85-203ENST00000540768 CCDC141Q6ZP82 1450 aa13.8□□□□□ -0.2
NUP85-203ENST00000540768 ADGRL1O94910 1474 aa13.79□□□□□ -0.2
NUP85-203ENST00000540768 RSPH4AQ5TD94 716 aa13.78□□□□□ -0.2
NUP85-203ENST00000540768 UHRF1BP1Q6BDS2 1440 aa13.78□□□□□ -0.2
NUP85-203ENST00000540768 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.78□□□□□ -0.2
NUP85-203ENST00000540768 TTC37Q6PGP7 1564 aa13.77□□□□□ -0.2
NUP85-203ENST00000540768 KIF7Q2M1P5 1343 aa13.77□□□□□ -0.2
NUP85-203ENST00000540768 MAST1Q9Y2H9 1570 aa13.76□□□□□ -0.21
NUP85-203ENST00000540768 ARHGEF12Q9NZN5 1544 aa13.76□□□□□ -0.21
NUP85-203ENST00000540768 SYCP2Q9BX26 1530 aa13.74□□□□□ -0.21
NUP85-203ENST00000540768 PRKRIP1Q9H875 184 aaPredicted RBP13.74□□□□□ -0.21
NUP85-203ENST00000540768 KDM5CP41229 1560 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms