RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 ZNF316A6NFI3 1004 aaPredicted RBP8.6□□□□□ -1.03
AC055720.1-201ENST00000539552 TMEM92Q6UXU6 159 aa8.6□□□□□ -1.03
AC055720.1-201ENST00000539552 LSM11P83369 360 aaKnown RBP eCLIP8.59□□□□□ -1.03
AC055720.1-201ENST00000539552 RIOK3O14730 519 aaKnown RBP8.58□□□□□ -1.04
AC055720.1-201ENST00000539552 VGFO15240 615 aaPredicted RBP8.58□□□□□ -1.04
AC055720.1-201ENST00000539552 TAOK2Q9UL54 1235 aa8.58□□□□□ -1.04
AC055720.1-201ENST00000539552 PHF8Q9UPP1 1060 aa8.57□□□□□ -1.04
AC055720.1-201ENST00000539552 PBX2P40425 430 aa8.56□□□□□ -1.04
AC055720.1-201ENST00000539552 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.55□□□□□ -1.04
AC055720.1-201ENST00000539552 NLRP6P59044 892 aa8.55□□□□□ -1.04
AC055720.1-201ENST00000539552 ZFP91Q96JP5 570 aaPredicted RBP8.55□□□□□ -1.04
AC055720.1-201ENST00000539552 PLA2G2EQ9NZK7 142 aa8.55□□□□□ -1.04
AC055720.1-201ENST00000539552 HCSTQ9UBK5 93 aa8.54□□□□□ -1.04
AC055720.1-201ENST00000539552 KHSRPQ92945 711 aaKnown RBP eCLIP8.52□□□□□ -1.05
AC055720.1-201ENST00000539552 MS4A4AQ96JQ5 239 aa8.52□□□□□ -1.05
AC055720.1-201ENST00000539552 NUDT7P0C024 238 aa8.5□□□□□ -1.05
AC055720.1-201ENST00000539552 STAC3Q96MF2 364 aa8.49□□□□□ -1.05
AC055720.1-201ENST00000539552 PSDA5PKW4 1024 aaPredicted RBP8.46□□□□□ -1.06
AC055720.1-201ENST00000539552 SLC24A1O60721 1099 aa8.46□□□□□ -1.06
AC055720.1-201ENST00000539552 TMC2Q8TDI7 906 aa8.46□□□□□ -1.06
AC055720.1-201ENST00000539552 LHX6Q9UPM6 363 aa8.45□□□□□ -1.06
AC055720.1-201ENST00000539552 AXIN2Q9Y2T1 843 aa8.45□□□□□ -1.06
AC055720.1-201ENST00000539552 STK24Q9Y6E0 443 aa8.45□□□□□ -1.06
AC055720.1-201ENST00000539552 BCL11BQ9C0K0 894 aaPredicted RBP8.44□□□□□ -1.06
AC055720.1-201ENST00000539552 C2orf72A6NCS6 295 aa8.43□□□□□ -1.06
AC055720.1-201ENST00000539552 PCDHGA4Q9Y5G9 962 aa8.43□□□□□ -1.06
AC055720.1-201ENST00000539552 ARHGAP33O14559 1287 aa8.42□□□□□ -1.06
AC055720.1-201ENST00000539552 ADGRD1Q6QNK2 874 aa8.42□□□□□ -1.06
AC055720.1-201ENST00000539552 RNF25Q96BH1 459 aaPredicted RBP8.42□□□□□ -1.06
AC055720.1-201ENST00000539552 KCNH8Q96L42 1107 aa8.42□□□□□ -1.06
AC055720.1-201ENST00000539552 STK25O00506 426 aa8.39□□□□□ -1.07
AC055720.1-201ENST00000539552 SLC34A2O95436 690 aa8.39□□□□□ -1.07
AC055720.1-201ENST00000539552 FBXO22Q8NEZ5 403 aa8.39□□□□□ -1.07
AC055720.1-201ENST00000539552 KIF3CO14782 793 aa8.36□□□□□ -1.07
AC055720.1-201ENST00000539552 TK2O00142 265 aa8.35□□□□□ -1.07
AC055720.1-201ENST00000539552 KCTD12Q96CX2 325 aaKnown RBP8.35□□□□□ -1.07
AC055720.1-201ENST00000539552 MFRPQ9BY79 579 aa8.35□□□□□ -1.07
AC055720.1-201ENST00000539552 PPP4R3BQ5MIZ7 849 aa8.33□□□□□ -1.08
AC055720.1-201ENST00000539552 POTEEQ6S8J3 1075 aa8.33□□□□□ -1.08
AC055720.1-201ENST00000539552 TBC1D12O60347 775 aa8.32□□□□□ -1.08
AC055720.1-201ENST00000539552 PSEN2P49810 448 aa8.29□□□□□ -1.08
AC055720.1-201ENST00000539552 RGS20O76081 388 aa8.28□□□□□ -1.08
AC055720.1-201ENST00000539552 PTPN5P54829 565 aa8.28□□□□□ -1.08
AC055720.1-201ENST00000539552 IRX2Q9BZI1 471 aaPredicted RBP8.28□□□□□ -1.08
AC055720.1-201ENST00000539552 GOLGA8CPA6NN73 597 aa8.27□□□□□ -1.09
AC055720.1-201ENST00000539552 ECM2O94769 699 aaPredicted RBP8.27□□□□□ -1.09
AC055720.1-201ENST00000539552 DMRTA1Q5VZB9 504 aa8.27□□□□□ -1.09
AC055720.1-201ENST00000539552 HRO43593 1189 aa8.26□□□□□ -1.09
AC055720.1-201ENST00000539552 KCNK17Q96T54 332 aa8.25□□□□□ -1.09
AC055720.1-201ENST00000539552 PTCD2Q8WV60 388 aaKnown RBP8.24□□□□□ -1.09
AC055720.1-201ENST00000539552 PLPP6Q8IY26 295 aa8.22□□□□□ -1.09
AC055720.1-201ENST00000539552 FOXK1P85037 733 aa8.19□□□□□ -1.1
AC055720.1-201ENST00000539552 IFFO2Q5TF58 517 aa8.17□□□□□ -1.1
AC055720.1-201ENST00000539552 MRPL50Q8N5N7 158 aaKnown RBP8.17□□□□□ -1.1
AC055720.1-201ENST00000539552 VPS9D1Q9Y2B5 631 aa8.17□□□□□ -1.1
AC055720.1-201ENST00000539552 ZNF454Q8N9F8 522 aa8.16□□□□□ -1.1
AC055720.1-201ENST00000539552 WNT2BQ93097 391 aa8.16□□□□□ -1.1
AC055720.1-201ENST00000539552 GPHNQ9NQX3 736 aaPredicted RBP8.16□□□□□ -1.1
AC055720.1-201ENST00000539552 PTPREP23469 700 aa8.15□□□□□ -1.1
AC055720.1-201ENST00000539552 A0A0G2JS52 829 aa8.14□□□□□ -1.11
AC055720.1-201ENST00000539552 KDM4FA0A1W2PPD8 638 aa8.14□□□□□ -1.11
AC055720.1-201ENST00000539552 PPP1R37O75864 691 aa8.14□□□□□ -1.11
AC055720.1-201ENST00000539552 THSD4Q6ZMP0 1018 aa8.14□□□□□ -1.11
AC055720.1-201ENST00000539552 NBPF3Q9H094 633 aa8.14□□□□□ -1.11
AC055720.1-201ENST00000539552 DSG2Q14126 1118 aa8.12□□□□□ -1.11
AC055720.1-201ENST00000539552 UPF1Q92900 1129 aaKnown RBP eCLIP8.11□□□□□ -1.11
AC055720.1-201ENST00000539552 SLC4A5Q9BY07 1137 aa8.11□□□□□ -1.11
AC055720.1-201ENST00000539552 BCL2L12Q9HB09 334 aa8.11□□□□□ -1.11
AC055720.1-201ENST00000539552 RGL2O15211 777 aa8.1□□□□□ -1.11
AC055720.1-201ENST00000539552 Q6ZNB5 142 aa8.1□□□□□ -1.11
AC055720.1-201ENST00000539552 DNAJC5Q9H3Z4 198 aa8.06□□□□□ -1.12
AC055720.1-201ENST00000539552 ANKK1Q8NFD2 765 aa8.05□□□□□ -1.12
AC055720.1-201ENST00000539552 ZBED2Q9BTP6 218 aa8.05□□□□□ -1.12
AC055720.1-201ENST00000539552 BHMG1C9JSJ3 638 aaPredicted RBP8.04□□□□□ -1.12
AC055720.1-201ENST00000539552 OXER1Q8TDS5 423 aa8.04□□□□□ -1.12
AC055720.1-201ENST00000539552 RYDENQ9NUL5 291 aaKnown RBP8.04□□□□□ -1.12
AC055720.1-201ENST00000539552 FOSBP53539 338 aa8.03□□□□□ -1.12
AC055720.1-201ENST00000539552 AMER1Q5JTC6 1135 aaPredicted RBP8.03□□□□□ -1.12
AC055720.1-201ENST00000539552 ZDHHC16Q969W1 377 aa8.03□□□□□ -1.12
AC055720.1-201ENST00000539552 JPH4Q96JJ6 628 aa8.02□□□□□ -1.13
AC055720.1-201ENST00000539552 PPP1R15BQ5SWA1 713 aa8.01□□□□□ -1.13
AC055720.1-201ENST00000539552 NYAP1Q6ZVC0 841 aa8□□□□□ -1.13
AC055720.1-201ENST00000539552 PKD2Q13563 968 aa7.99□□□□□ -1.13
AC055720.1-201ENST00000539552 LAPTM4AQ15012 233 aa7.99□□□□□ -1.13
AC055720.1-201ENST00000539552 EVI5O60447 810 aa7.98□□□□□ -1.13
AC055720.1-201ENST00000539552 ITGBL1O95965 494 aaPredicted RBP7.97□□□□□ -1.13
AC055720.1-201ENST00000539552 PDE4AP27815 886 aa7.97□□□□□ -1.13
AC055720.1-201ENST00000539552 MAP3K9P80192 1104 aa7.97□□□□□ -1.13
AC055720.1-201ENST00000539552 KCNC4Q03721 635 aa7.97□□□□□ -1.13
AC055720.1-201ENST00000539552 HS6ST3Q8IZP7 471 aa7.97□□□□□ -1.13
AC055720.1-201ENST00000539552 RABGEF1Q9UJ41 708 aa7.97□□□□□ -1.13
AC055720.1-201ENST00000539552 ADAM33Q9BZ11 813 aa7.96□□□□□ -1.14
AC055720.1-201ENST00000539552 PPP1R3GB7ZBB8 358 aa7.95□□□□□ -1.14
AC055720.1-201ENST00000539552 CHGAP10645 457 aaKnown RBP7.95□□□□□ -1.14
AC055720.1-201ENST00000539552 LAPTM4BQ86VI4 370 aa7.94□□□□□ -1.14
AC055720.1-201ENST00000539552 BCAMP50895 628 aa7.93□□□□□ -1.14
AC055720.1-201ENST00000539552 ANO8Q9HCE9 1232 aaPredicted RBP7.93□□□□□ -1.14
AC055720.1-201ENST00000539552 SOWAHBA6NEL2 793 aa7.92□□□□□ -1.14
AC055720.1-201ENST00000539552 CRISPLD2Q9H0B8 497 aa7.92□□□□□ -1.14
AC055720.1-201ENST00000539552 PROX2Q3B8N5 592 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms