RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 NAIPQ13075 1403 aa29.99■■■□□ 2.39
CDH5-202ENST00000539168 PREX2Q70Z35 1606 aa29.99■■■□□ 2.39
CDH5-202ENST00000539168 ABCC5O15440 1437 aa29.98■■■□□ 2.39
CDH5-202ENST00000539168 GCC2Q8IWJ2 1684 aa29.97■■■□□ 2.39
CDH5-202ENST00000539168 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.97■■■□□ 2.39
CDH5-202ENST00000539168 ZNF644Q9H582 1327 aaPredicted RBP29.94■■■□□ 2.38
CDH5-202ENST00000539168 MYO5CQ9NQX4 1742 aa29.92■■■□□ 2.38
CDH5-202ENST00000539168 ZNF777Q9ULD5 760 aaPredicted RBP29.91■■■□□ 2.38
CDH5-202ENST00000539168 WDR7Q9Y4E6 1490 aa29.91■■■□□ 2.38
CDH5-202ENST00000539168 TTC37Q6PGP7 1564 aa29.91■■■□□ 2.38
CDH5-202ENST00000539168 RSPH4AQ5TD94 716 aa29.91■■■□□ 2.38
CDH5-202ENST00000539168 CDC42BPBQ9Y5S2 1711 aa29.9■■■□□ 2.38
CDH5-202ENST00000539168 NPM1P06748 294 aaKnown RBP eCLIP29.9■■■□□ 2.38
CDH5-202ENST00000539168 CROCC2H7BZ55 1655 aa29.89■■■□□ 2.37
CDH5-202ENST00000539168 ARHGEF5Q12774 1597 aa29.89■■■□□ 2.37
CDH5-202ENST00000539168 SHANK2Q9UPX8 1470 aa29.89■■■□□ 2.37
CDH5-202ENST00000539168 PLEKHH2Q8IVE3 1493 aa29.88■■■□□ 2.37
CDH5-202ENST00000539168 CHIC2Q9UKJ5 165 aa29.87■■■□□ 2.37
CDH5-202ENST00000539168 ADGBQ8N7X0 1667 aa29.87■■■□□ 2.37
CDH5-202ENST00000539168 ADGRL2O95490 1459 aa29.86■■■□□ 2.37
CDH5-202ENST00000539168 ARHGAP5Q13017 1502 aa29.85■■■□□ 2.37
CDH5-202ENST00000539168 ARAP3Q8WWN8 1544 aa29.85■■■□□ 2.37
CDH5-202ENST00000539168 KCNH8Q96L42 1107 aa29.85■■■□□ 2.37
CDH5-202ENST00000539168 PLCH2O75038 1416 aa29.84■■■□□ 2.37
CDH5-202ENST00000539168 RRP7BPQ9NSQ0 103 aa29.83■■■□□ 2.37
CDH5-202ENST00000539168 SAMD9LQ8IVG5 1584 aa29.82■■■□□ 2.36
CDH5-202ENST00000539168 KIAA1107Q9UPP5 1409 aa29.8■■■□□ 2.36
CDH5-202ENST00000539168 ANKRD30AQ9BXX3 1397 aa29.8■■■□□ 2.36
CDH5-202ENST00000539168 TSPY4P0CV99 314 aa29.79■■■□□ 2.36
CDH5-202ENST00000539168 TSPY10P0CW01 314 aa29.79■■■□□ 2.36
CDH5-202ENST00000539168 ASXL2Q76L83 1435 aa29.78■■■□□ 2.36
CDH5-202ENST00000539168 NCOA1Q15788 1441 aa29.78■■■□□ 2.36
CDH5-202ENST00000539168 MBD5Q9P267 1494 aa29.77■■■□□ 2.36
CDH5-202ENST00000539168 EFCAB2Q5VUJ9 269 aa29.77■■■□□ 2.36
CDH5-202ENST00000539168 CCDC141Q6ZP82 1450 aa29.77■■■□□ 2.36
CDH5-202ENST00000539168 MAPKBP1O60336 1514 aa29.76■■■□□ 2.36
CDH5-202ENST00000539168 ABCA9Q8IUA7 1624 aa29.75■■■□□ 2.35
CDH5-202ENST00000539168 C9orf84Q5VXU9 1444 aa29.74■■■□□ 2.35
CDH5-202ENST00000539168 MAST1Q9Y2H9 1570 aa29.68■■■□□ 2.34
CDH5-202ENST00000539168 HNRNPMP52272 730 aaKnown RBP eCLIP29.68■■■□□ 2.34
CDH5-202ENST00000539168 RIMBP3CA6NJZ7 1639 aa29.68■■■□□ 2.34
CDH5-202ENST00000539168 RIMBP3BA6NNM3 1639 aa29.68■■■□□ 2.34
CDH5-202ENST00000539168 RIMBP3Q9UFD9 1639 aa29.68■■■□□ 2.34
CDH5-202ENST00000539168 SYCP2Q9BX26 1530 aa29.68■■■□□ 2.34
CDH5-202ENST00000539168 TIMELESSQ9UNS1 1208 aa29.65■■■□□ 2.34
CDH5-202ENST00000539168 ABCC1P33527 1531 aa29.63■■■□□ 2.33
CDH5-202ENST00000539168 KDM6BO15054 1643 aa29.63■■■□□ 2.33
CDH5-202ENST00000539168 TRIM52Q96A61 297 aa29.61■■■□□ 2.33
CDH5-202ENST00000539168 ANKRD50Q9ULJ7 1429 aa29.59■■■□□ 2.33
CDH5-202ENST00000539168 FANCAO15360 1455 aa29.56■■■□□ 2.32
CDH5-202ENST00000539168 KIF15Q9NS87 1388 aa29.56■■■□□ 2.32
CDH5-202ENST00000539168 PLXNC1O60486 1568 aa29.55■■■□□ 2.32
CDH5-202ENST00000539168 CYB5RLQ6IPT4 315 aa29.54■■■□□ 2.32
CDH5-202ENST00000539168 CFAP74Q9C0B2 1584 aa29.53■■■□□ 2.32
CDH5-202ENST00000539168 ARHGEF12Q9NZN5 1544 aa29.52■■■□□ 2.32
CDH5-202ENST00000539168 MPHOSPH9Q99550 1183 aa29.52■■■□□ 2.32
CDH5-202ENST00000539168 RTEL1-TNFRSF6BF6WH68 1400 aa29.49■■■□□ 2.31
CDH5-202ENST00000539168 CD109Q6YHK3 1445 aa29.47■■■□□ 2.31
CDH5-202ENST00000539168 ADGRL1O94910 1474 aa29.44■■■□□ 2.3
CDH5-202ENST00000539168 DUOX2Q9NRD8 1548 aa29.44■■■□□ 2.3
CDH5-202ENST00000539168 TRAPPC8Q9Y2L5 1435 aa29.44■■■□□ 2.3
CDH5-202ENST00000539168 KDM5DQ9BY66 1539 aa29.43■■■□□ 2.3
CDH5-202ENST00000539168 SIN3AQ96ST3 1273 aa29.42■■■□□ 2.3
CDH5-202ENST00000539168 SLC4A1APQ9BWU0 796 aaKnown RBP29.42■■■□□ 2.3
CDH5-202ENST00000539168 DENND4BO75064 1496 aaPredicted RBP29.42■■■□□ 2.3
CDH5-202ENST00000539168 GLI2P10070 1586 aa29.41■■■□□ 2.3
CDH5-202ENST00000539168 NEUROD1Q13562 356 aa29.4■■■□□ 2.3
CDH5-202ENST00000539168 SPAG9O60271 1321 aaKnown RBP29.4■■■□□ 2.3
CDH5-202ENST00000539168 PZPP20742 1482 aa29.39■■■□□ 2.3
CDH5-202ENST00000539168 ERBINQ96RT1 1412 aa29.39■■■□□ 2.3
CDH5-202ENST00000539168 SCAPERQ9BY12 1400 aa29.39■■■□□ 2.3
CDH5-202ENST00000539168 NEO1Q92859 1461 aa29.37■■■□□ 2.29
CDH5-202ENST00000539168 TONSLQ96HA7 1378 aa29.36■■■□□ 2.29
CDH5-202ENST00000539168 ZFYVE16Q7Z3T8 1539 aa29.34■■■□□ 2.29
CDH5-202ENST00000539168 NUP155O75694 1391 aa29.34■■■□□ 2.29
CDH5-202ENST00000539168 ZNF316A6NFI3 1004 aaPredicted RBP29.34■■■□□ 2.29
CDH5-202ENST00000539168 ANKRD30BQ9BXX2 1392 aa29.32■■■□□ 2.28
CDH5-202ENST00000539168 ZNF518AQ6AHZ1 1483 aa29.32■■■□□ 2.28
CDH5-202ENST00000539168 INO80Q9ULG1 1556 aaPredicted RBP29.32■■■□□ 2.28
CDH5-202ENST00000539168 UNC13BO14795 1591 aa29.31■■■□□ 2.28
CDH5-202ENST00000539168 MAP3K4Q9Y6R4 1608 aa29.31■■■□□ 2.28
CDH5-202ENST00000539168 AFAP1Q8N556 730 aa29.31■■■□□ 2.28
CDH5-202ENST00000539168 ATP7AQ04656 1500 aa29.3■■■□□ 2.28
CDH5-202ENST00000539168 PPP1R15AO75807 674 aaPredicted RBP29.25■■■□□ 2.27
CDH5-202ENST00000539168 POGZQ7Z3K3 1410 aa29.23■■■□□ 2.27
CDH5-202ENST00000539168 RPRD2Q5VT52 1461 aaKnown RBP29.23■■■□□ 2.27
CDH5-202ENST00000539168 MAGI2Q86UL8 1455 aa29.23■■■□□ 2.27
CDH5-202ENST00000539168 PKD2Q13563 968 aa29.22■■■□□ 2.27
CDH5-202ENST00000539168 KDM5CP41229 1560 aa29.22■■■□□ 2.27
CDH5-202ENST00000539168 DIP2BQ9P265 1576 aa29.22■■■□□ 2.27
CDH5-202ENST00000539168 FAM135AQ9P2D6 1515 aa29.22■■■□□ 2.27
CDH5-202ENST00000539168 IQGAP3Q86VI3 1631 aa29.2■■■□□ 2.26
CDH5-202ENST00000539168 MLH3Q9UHC1 1453 aa29.19■■■□□ 2.26
CDH5-202ENST00000539168 EIF2AK4Q9P2K8 1649 aaKnown RBP29.18■■■□□ 2.26
CDH5-202ENST00000539168 FOXD1Q16676 465 aa29.17■■■□□ 2.26
CDH5-202ENST00000539168 MYT1LQ9UL68 1186 aa29.16■■■□□ 2.26
CDH5-202ENST00000539168 DHX29Q7Z478 1369 aaKnown RBP29.15■■■□□ 2.26
CDH5-202ENST00000539168 FAM69CQ0P6D2 419 aa29.15■■■□□ 2.26
CDH5-202ENST00000539168 KIDINS220Q9ULH0 1771 aa29.14■■■□□ 2.26
CDH5-202ENST00000539168 HECW2Q9P2P5 1572 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms