RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 CAMSAP2Q08AD1 1489 aa25.24■■□□□ 1.63
SNX17-210ENST00000537606 SCAF1Q9H7N4 1312 aaKnown RBP25.23■■□□□ 1.63
SNX17-210ENST00000537606 DNMT1P26358 1616 aaKnown RBP25.22■■□□□ 1.63
SNX17-210ENST00000537606 GCC2Q8IWJ2 1684 aa25.22■■□□□ 1.63
SNX17-210ENST00000537606 AKNAQ7Z591 1439 aa25.21■■□□□ 1.63
SNX17-210ENST00000537606 ITSN2Q9NZM3 1697 aa25.19■■□□□ 1.62
SNX17-210ENST00000537606 ABCC10Q5T3U5 1492 aa25.17■■□□□ 1.62
SNX17-210ENST00000537606 ROCK1Q13464 1354 aa25.16■■□□□ 1.62
SNX17-210ENST00000537606 ACIN1Q9UKV3 1341 aaKnown RBP25.15■■□□□ 1.62
SNX17-210ENST00000537606 FOXD1Q16676 465 aa25.14■■□□□ 1.62
SNX17-210ENST00000537606 MPHOSPH9Q99550 1183 aa25.14■■□□□ 1.62
SNX17-210ENST00000537606 TIMELESSQ9UNS1 1208 aa25.14■■□□□ 1.62
SNX17-210ENST00000537606 PPP1R15AO75807 674 aaPredicted RBP25.14■■□□□ 1.61
SNX17-210ENST00000537606 CDC42BPAQ5VT25 1732 aa25.14■■□□□ 1.61
SNX17-210ENST00000537606 CLASP1Q7Z460 1538 aa25.14■■□□□ 1.61
SNX17-210ENST00000537606 DENND4BO75064 1496 aaPredicted RBP25.13■■□□□ 1.61
SNX17-210ENST00000537606 TONSLQ96HA7 1378 aa25.13■■□□□ 1.61
SNX17-210ENST00000537606 YTHDC1Q96MU7 727 aaKnown RBP25.13■■□□□ 1.61
SNX17-210ENST00000537606 HNRNPMP52272 730 aaKnown RBP eCLIP25.08■■□□□ 1.61
SNX17-210ENST00000537606 KCNH8Q96L42 1107 aa25.08■■□□□ 1.61
SNX17-210ENST00000537606 NCOA1Q15788 1441 aa25.07■■□□□ 1.6
SNX17-210ENST00000537606 ABCC2Q92887 1545 aa25.06■■□□□ 1.6
SNX17-210ENST00000537606 CENPBP07199 599 aaPredicted RBP25.05■■□□□ 1.6
SNX17-210ENST00000537606 HIRIP3Q9BW71 556 aaPredicted RBP25.04■■□□□ 1.6
SNX17-210ENST00000537606 SLC4A1APQ9BWU0 796 aaKnown RBP25.02■■□□□ 1.6
SNX17-210ENST00000537606 ANKRD30AQ9BXX3 1397 aa25■■□□□ 1.59
SNX17-210ENST00000537606 TSPY4P0CV99 314 aa25■■□□□ 1.59
SNX17-210ENST00000537606 TSPY10P0CW01 314 aa25■■□□□ 1.59
SNX17-210ENST00000537606 CROCC2H7BZ55 1655 aa24.99■■□□□ 1.59
SNX17-210ENST00000537606 ADGBQ8N7X0 1667 aa24.97■■□□□ 1.59
SNX17-210ENST00000537606 ADGRL2O95490 1459 aa24.97■■□□□ 1.59
SNX17-210ENST00000537606 C9orf84Q5VXU9 1444 aa24.97■■□□□ 1.59
SNX17-210ENST00000537606 CDC42BPBQ9Y5S2 1711 aa24.96■■□□□ 1.59
SNX17-210ENST00000537606 TTC37Q6PGP7 1564 aa24.95■■□□□ 1.59
SNX17-210ENST00000537606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.95■■□□□ 1.58
SNX17-210ENST00000537606 SAMD9LQ8IVG5 1584 aa24.93■■□□□ 1.58
SNX17-210ENST00000537606 MBD5Q9P267 1494 aa24.93■■□□□ 1.58
SNX17-210ENST00000537606 ANKRD50Q9ULJ7 1429 aa24.92■■□□□ 1.58
SNX17-210ENST00000537606 PREX2Q70Z35 1606 aa24.92■■□□□ 1.58
SNX17-210ENST00000537606 ZCCHC11Q5TAX3 1644 aaKnown RBP24.92■■□□□ 1.58
SNX17-210ENST00000537606 ARHGAP5Q13017 1502 aa24.91■■□□□ 1.58
SNX17-210ENST00000537606 ANKRD30BQ9BXX2 1392 aa24.9■■□□□ 1.58
SNX17-210ENST00000537606 KDM5BQ9UGL1 1544 aa24.9■■□□□ 1.58
SNX17-210ENST00000537606 PZPP20742 1482 aa24.89■■□□□ 1.58
SNX17-210ENST00000537606 UHRF1BP1LA0JNW5 1464 aa24.88■■□□□ 1.57
SNX17-210ENST00000537606 L3MBTL2Q969R5 705 aa24.88■■□□□ 1.57
SNX17-210ENST00000537606 SHANK2Q9UPX8 1470 aa24.88■■□□□ 1.57
SNX17-210ENST00000537606 GTF3C3Q9Y5Q9 886 aa24.86■■□□□ 1.57
SNX17-210ENST00000537606 KIF15Q9NS87 1388 aa24.86■■□□□ 1.57
SNX17-210ENST00000537606 DDX10Q13206 875 aaKnown RBP24.86■■□□□ 1.57
SNX17-210ENST00000537606 CCDC141Q6ZP82 1450 aa24.85■■□□□ 1.57
SNX17-210ENST00000537606 SYCP2Q9BX26 1530 aa24.85■■□□□ 1.57
SNX17-210ENST00000537606 ARHGEF5Q12774 1597 aa24.84■■□□□ 1.57
SNX17-210ENST00000537606 PKD2Q13563 968 aa24.84■■□□□ 1.57
SNX17-210ENST00000537606 OSCARQ8IYS5 282 aa24.84■■□□□ 1.57
SNX17-210ENST00000537606 NUP155O75694 1391 aa24.82■■□□□ 1.56
SNX17-210ENST00000537606 RSPH4AQ5TD94 716 aa24.81■■□□□ 1.56
SNX17-210ENST00000537606 MYO5CQ9NQX4 1742 aa24.81■■□□□ 1.56
SNX17-210ENST00000537606 RPRD2Q5VT52 1461 aaKnown RBP24.79■■□□□ 1.56
SNX17-210ENST00000537606 PLCH2O75038 1416 aa24.77■■□□□ 1.56
SNX17-210ENST00000537606 EFCAB2Q5VUJ9 269 aa24.76■■□□□ 1.55
SNX17-210ENST00000537606 KIAA1107Q9UPP5 1409 aa24.76■■□□□ 1.55
SNX17-210ENST00000537606 ARHGEF12Q9NZN5 1544 aa24.75■■□□□ 1.55
SNX17-210ENST00000537606 NBPF8Q3BBV2 869 aa24.72■■□□□ 1.55
SNX17-210ENST00000537606 TEX14Q8IWB6 1497 aa24.69■■□□□ 1.54
SNX17-210ENST00000537606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.69■■□□□ 1.542e-6■□□□□ 10.1
SNX17-210ENST00000537606 PLEKHH2Q8IVE3 1493 aa24.69■■□□□ 1.54
SNX17-210ENST00000537606 HSPA5P11021 654 aaKnown RBP24.69■■□□□ 1.54
SNX17-210ENST00000537606 WDR7Q9Y4E6 1490 aa24.68■■□□□ 1.54
SNX17-210ENST00000537606 TRAPPC8Q9Y2L5 1435 aa24.66■■□□□ 1.54
SNX17-210ENST00000537606 AFAP1Q8N556 730 aa24.65■■□□□ 1.54
SNX17-210ENST00000537606 EIF4G2P78344 907 aaKnown RBP eCLIP24.63■■□□□ 1.53
SNX17-210ENST00000537606 ZNF326Q5BKZ1 582 aaKnown RBP24.63■■□□□ 1.53
SNX17-210ENST00000537606 MAST1Q9Y2H9 1570 aa24.63■■□□□ 1.53
SNX17-210ENST00000537606 ASXL2Q76L83 1435 aa24.62■■□□□ 1.53
SNX17-210ENST00000537606 KDM5DQ9BY66 1539 aa24.61■■□□□ 1.53
SNX17-210ENST00000537606 ABCC1P33527 1531 aa24.6■■□□□ 1.53
SNX17-210ENST00000537606 NPM1P06748 294 aaKnown RBP eCLIP24.59■■□□□ 1.53
SNX17-210ENST00000537606 FAM135AQ9P2D6 1515 aa24.58■■□□□ 1.53
SNX17-210ENST00000537606 SPAG9O60271 1321 aaKnown RBP24.56■■□□□ 1.52
SNX17-210ENST00000537606 PLXNC1O60486 1568 aa24.55■■□□□ 1.52
SNX17-210ENST00000537606 WASHC2AQ641Q2 1341 aa24.54■■□□□ 1.52
SNX17-210ENST00000537606 FANCAO15360 1455 aa24.54■■□□□ 1.52
SNX17-210ENST00000537606 MYT1LQ9UL68 1186 aa24.52■■□□□ 1.52
SNX17-210ENST00000537606 KDM2AQ9Y2K7 1162 aa24.52■■□□□ 1.52
SNX17-210ENST00000537606 DUOX2Q9NRD8 1548 aa24.52■■□□□ 1.52
SNX17-210ENST00000537606 C11orf95C9JLR9 678 aaPredicted RBP24.51■■□□□ 1.51
SNX17-210ENST00000537606 ABCA9Q8IUA7 1624 aa24.5■■□□□ 1.51
SNX17-210ENST00000537606 ARAP3Q8WWN8 1544 aa24.49■■□□□ 1.51
SNX17-210ENST00000537606 ANP32CO43423 234 aa24.49■■□□□ 1.51
SNX17-210ENST00000537606 UNC13BO14795 1591 aa24.48■■□□□ 1.51
SNX17-210ENST00000537606 DCAF11Q8TEB1 546 aa24.47■■□□□ 1.51
SNX17-210ENST00000537606 SCAPERQ9BY12 1400 aa24.47■■□□□ 1.51
SNX17-210ENST00000537606 ERBINQ96RT1 1412 aa24.46■■□□□ 1.51
SNX17-210ENST00000537606 ADGRL1O94910 1474 aa24.45■■□□□ 1.5
SNX17-210ENST00000537606 RGL3Q3MIN7 710 aa24.44■■□□□ 1.5
SNX17-210ENST00000537606 ZFYVE16Q7Z3T8 1539 aa24.42■■□□□ 1.5
SNX17-210ENST00000537606 CCDC144AA2RUR9 1427 aa24.42■■□□□ 1.5
SNX17-210ENST00000537606 PLA2R1Q13018 1463 aa24.42■■□□□ 1.5
SNX17-210ENST00000537606 RTEL1-TNFRSF6BF6WH68 1400 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms