RNA–Protein interactions for RNA: ENST00000536666.1

LINC02398-201, Transcript of long intergenic non-protein coding RNA 2398, humanhuman

TSL 3 BASIC

Gene LINC02398, Length 431 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02398-201ENST00000536666 FBXO22Q8NEZ5 403 aa12.26□□□□□ -0.45
LINC02398-201ENST00000536666 MFRPQ9BY79 579 aa12.25□□□□□ -0.45
LINC02398-201ENST00000536666 ERBB3P21860 1342 aa12.23□□□□□ -0.45
LINC02398-201ENST00000536666 SPNS2Q8IVW8 549 aa12.22□□□□□ -0.45
LINC02398-201ENST00000536666 ZSWIM6Q9HCJ5 1215 aa12.22□□□□□ -0.45
LINC02398-201ENST00000536666 POTEB3A0JP26 581 aa12.2□□□□□ -0.46
LINC02398-201ENST00000536666 POTEBQ6S5H4 581 aa12.2□□□□□ -0.46
LINC02398-201ENST00000536666 MMRN1Q13201 1228 aa12.17□□□□□ -0.46
LINC02398-201ENST00000536666 VARS2Q5ST30 1063 aaKnown RBP12.14□□□□□ -0.47
LINC02398-201ENST00000536666 KRTAP3-3Q9BYR6 98 aa12.13□□□□□ -0.47
LINC02398-201ENST00000536666 KRTAP3-2Q9BYR7 98 aa12.13□□□□□ -0.47
LINC02398-201ENST00000536666 GPR153Q6NV75 609 aa12.12□□□□□ -0.47
LINC02398-201ENST00000536666 ARSIQ5FYB1 569 aa12.1□□□□□ -0.47
LINC02398-201ENST00000536666 TMC2Q8TDI7 906 aa12.1□□□□□ -0.47
LINC02398-201ENST00000536666 C2orf72A6NCS6 295 aa12.09□□□□□ -0.47
LINC02398-201ENST00000536666 HS6ST3Q8IZP7 471 aa12.06□□□□□ -0.48
LINC02398-201ENST00000536666 KIF3CO14782 793 aa12.05□□□□□ -0.48
LINC02398-201ENST00000536666 CHGAP10645 457 aaKnown RBP12.04□□□□□ -0.48
LINC02398-201ENST00000536666 ZNF687Q8N1G0 1237 aa12.03□□□□□ -0.48
LINC02398-201ENST00000536666 PPP1R37O75864 691 aa12.02□□□□□ -0.49
LINC02398-201ENST00000536666 KHSRPQ92945 711 aaKnown RBP eCLIP12.01□□□□□ -0.49
LINC02398-201ENST00000536666 ZNF316A6NFI3 1004 aaPredicted RBP11.99□□□□□ -0.49
LINC02398-201ENST00000536666 SLC34A2O95436 690 aa11.96□□□□□ -0.49
LINC02398-201ENST00000536666 NUDT7P0C024 238 aa11.96□□□□□ -0.49
LINC02398-201ENST00000536666 RYDENQ9NUL5 291 aaKnown RBP11.95□□□□□ -0.5
LINC02398-201ENST00000536666 PCDHGA4Q9Y5G9 962 aa11.95□□□□□ -0.5
LINC02398-201ENST00000536666 ANKRD13DQ6ZTN6 518 aa11.91□□□□□ -0.5
LINC02398-201ENST00000536666 RNF166Q96A37 237 aaPredicted RBP11.89□□□□□ -0.51
LINC02398-201ENST00000536666 MYT1LQ9UL68 1186 aa11.89□□□□□ -0.51
LINC02398-201ENST00000536666 LHX6Q9UPM6 363 aa11.89□□□□□ -0.51
LINC02398-201ENST00000536666 FOXK1P85037 733 aa11.88□□□□□ -0.51
LINC02398-201ENST00000536666 GPHNQ9NQX3 736 aaPredicted RBP11.88□□□□□ -0.51
LINC02398-201ENST00000536666 PTGER2P43116 358 aa11.87□□□□□ -0.51
LINC02398-201ENST00000536666 PLPP6Q8IY26 295 aa11.87□□□□□ -0.51
LINC02398-201ENST00000536666 DNAJC5Q9H3Z4 198 aa11.86□□□□□ -0.51
LINC02398-201ENST00000536666 PBX2P40425 430 aa11.85□□□□□ -0.51
LINC02398-201ENST00000536666 PSDA5PKW4 1024 aaPredicted RBP11.84□□□□□ -0.51
LINC02398-201ENST00000536666 TBC1D12O60347 775 aa11.84□□□□□ -0.51
LINC02398-201ENST00000536666 DCAF8L2P0C7V8 631 aa11.84□□□□□ -0.51
LINC02398-201ENST00000536666 LSM11P83369 360 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC02398-201ENST00000536666 NKX1-1Q15270 411 aaPredicted RBP11.84□□□□□ -0.51
LINC02398-201ENST00000536666 PTCD2Q8WV60 388 aaKnown RBP11.83□□□□□ -0.52
LINC02398-201ENST00000536666 DSG2Q14126 1118 aa11.82□□□□□ -0.52
LINC02398-201ENST00000536666 AXIN2Q9Y2T1 843 aa11.78□□□□□ -0.52
LINC02398-201ENST00000536666 ARHGAP33O14559 1287 aa11.74□□□□□ -0.53
LINC02398-201ENST00000536666 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
LINC02398-201ENST00000536666 KDM4FA0A1W2PPD8 638 aa11.72□□□□□ -0.53
LINC02398-201ENST00000536666 PDE4AP27815 886 aa11.72□□□□□ -0.53
LINC02398-201ENST00000536666 POTEEQ6S8J3 1075 aa11.71□□□□□ -0.53
LINC02398-201ENST00000536666 UPF1Q92900 1129 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC02398-201ENST00000536666 CRISPLD2Q9H0B8 497 aa11.71□□□□□ -0.53
LINC02398-201ENST00000536666 PPP1R15BQ5SWA1 713 aa11.7□□□□□ -0.54
LINC02398-201ENST00000536666 KCNH8Q96L42 1107 aa11.7□□□□□ -0.54
LINC02398-201ENST00000536666 GTPBP6O43824 516 aaPredicted RBP11.69□□□□□ -0.54
LINC02398-201ENST00000536666 ADGRD1Q6QNK2 874 aa11.67□□□□□ -0.54
LINC02398-201ENST00000536666 OXER1Q8TDS5 423 aa11.67□□□□□ -0.54
LINC02398-201ENST00000536666 NCKAP5LQ9HCH0 1330 aa11.64□□□□□ -0.55
LINC02398-201ENST00000536666 PSEN2P49810 448 aa11.64□□□□□ -0.55
LINC02398-201ENST00000536666 STAC3Q96MF2 364 aa11.64□□□□□ -0.55
LINC02398-201ENST00000536666 LARP6Q9BRS8 491 aaKnown RBP11.64□□□□□ -0.55
LINC02398-201ENST00000536666 TK2O00142 265 aa11.63□□□□□ -0.55
LINC02398-201ENST00000536666 DDX27Q96GQ7 796 aaKnown RBP11.63□□□□□ -0.55
LINC02398-201ENST00000536666 DMRTA1Q5VZB9 504 aa11.61□□□□□ -0.55
LINC02398-201ENST00000536666 ZNF454Q8N9F8 522 aa11.61□□□□□ -0.55
LINC02398-201ENST00000536666 KCNK17Q96T54 332 aa11.61□□□□□ -0.55
LINC02398-201ENST00000536666 MAP3K9P80192 1104 aa11.57□□□□□ -0.56
LINC02398-201ENST00000536666 HCSTQ9UBK5 93 aa11.57□□□□□ -0.56
LINC02398-201ENST00000536666 EVI5O60447 810 aa11.55□□□□□ -0.56
LINC02398-201ENST00000536666 HRO43593 1189 aa11.53□□□□□ -0.56
LINC02398-201ENST00000536666 MFSD10Q14728 455 aa11.53□□□□□ -0.56
LINC02398-201ENST00000536666 BCL2L12Q9HB09 334 aa11.53□□□□□ -0.56
LINC02398-201ENST00000536666 PTPREP23469 700 aa11.52□□□□□ -0.57
LINC02398-201ENST00000536666 FOSBP53539 338 aa11.52□□□□□ -0.57
LINC02398-201ENST00000536666 ANO8Q9HCE9 1232 aaPredicted RBP11.52□□□□□ -0.57
LINC02398-201ENST00000536666 JPH4Q96JJ6 628 aa11.51□□□□□ -0.57
LINC02398-201ENST00000536666 KCTD12Q96CX2 325 aaKnown RBP11.49□□□□□ -0.57
LINC02398-201ENST00000536666 VPS9D1Q9Y2B5 631 aa11.49□□□□□ -0.57
LINC02398-201ENST00000536666 ZDHHC16Q969W1 377 aa11.48□□□□□ -0.57
LINC02398-201ENST00000536666 PLA2G2EQ9NZK7 142 aa11.47□□□□□ -0.57
LINC02398-201ENST00000536666 CADPS2Q86UW7 1296 aa11.46□□□□□ -0.57
LINC02398-201ENST00000536666 BBXQ8WY36 941 aaPredicted RBP11.46□□□□□ -0.57
LINC02398-201ENST00000536666 SLC4A5Q9BY07 1137 aa11.45□□□□□ -0.58
LINC02398-201ENST00000536666 EMILIN3Q9NT22 766 aa11.45□□□□□ -0.58
LINC02398-201ENST00000536666 GOLGA8CPA6NN73 597 aa11.43□□□□□ -0.58
LINC02398-201ENST00000536666 ADAM33Q9BZ11 813 aa11.43□□□□□ -0.58
LINC02398-201ENST00000536666 ZBED2Q9BTP6 218 aa11.41□□□□□ -0.58
LINC02398-201ENST00000536666 MRPL50Q8N5N7 158 aaKnown RBP11.4□□□□□ -0.58
LINC02398-201ENST00000536666 NBPF3Q9H094 633 aa11.39□□□□□ -0.59
LINC02398-201ENST00000536666 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.39□□□□□ -0.59
LINC02398-201ENST00000536666 PCDHGA10Q9Y5H3 936 aa11.39□□□□□ -0.59
LINC02398-201ENST00000536666 PTPN5P54829 565 aa11.38□□□□□ -0.59
LINC02398-201ENST00000536666 AMER1Q5JTC6 1135 aaPredicted RBP11.38□□□□□ -0.59
LINC02398-201ENST00000536666 FBXW7Q969H0 707 aa11.38□□□□□ -0.59
LINC02398-201ENST00000536666 BHMG1C9JSJ3 638 aaPredicted RBP11.36□□□□□ -0.59
LINC02398-201ENST00000536666 PHF14O94880 888 aa11.36□□□□□ -0.59
LINC02398-201ENST00000536666 TYW1BQ6NUM6 668 aa11.36□□□□□ -0.59
LINC02398-201ENST00000536666 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
LINC02398-201ENST00000536666 PPP1R3GB7ZBB8 358 aa11.35□□□□□ -0.59
LINC02398-201ENST00000536666 CAMK2BQ13554 666 aa11.35□□□□□ -0.59
LINC02398-201ENST00000536666 WNT2BQ93097 391 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms