RNA–Protein interactions for RNA: ENST00000536625.1

KNTC1-209, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,178 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-209ENST00000536625 RNF166Q96A37 237 aaPredicted RBP12.32□□□□□ -0.44
KNTC1-209ENST00000536625 ZSWIM6Q9HCJ5 1215 aa12.31□□□□□ -0.44
KNTC1-209ENST00000536625 ZNF687Q8N1G0 1237 aa12.29□□□□□ -0.44
KNTC1-209ENST00000536625 MYT1LQ9UL68 1186 aa12.26□□□□□ -0.45
KNTC1-209ENST00000536625 VGFO15240 615 aaPredicted RBP12.25□□□□□ -0.45
KNTC1-209ENST00000536625 ARSIQ5FYB1 569 aa12.25□□□□□ -0.45
KNTC1-209ENST00000536625 KHSRPQ92945 711 aaKnown RBP eCLIP12.24□□□□□ -0.451e-6■■■□□ 17.1
KNTC1-209ENST00000536625 FBXO22Q8NEZ5 403 aa12.2□□□□□ -0.46
KNTC1-209ENST00000536625 ZNF316A6NFI3 1004 aaPredicted RBP12.15□□□□□ -0.46
KNTC1-209ENST00000536625 NLRP6P59044 892 aa12.15□□□□□ -0.46
KNTC1-209ENST00000536625 ANKRD13DQ6ZTN6 518 aa12.15□□□□□ -0.46
KNTC1-209ENST00000536625 BCL11BQ9C0K0 894 aaPredicted RBP12.14□□□□□ -0.47
KNTC1-209ENST00000536625 MFRPQ9BY79 579 aa12.13□□□□□ -0.47
KNTC1-209ENST00000536625 KIF3CO14782 793 aa12.11□□□□□ -0.47
KNTC1-209ENST00000536625 PTGER2P43116 358 aa12.1□□□□□ -0.47
KNTC1-209ENST00000536625 LSM11P83369 360 aaKnown RBP eCLIP12.09□□□□□ -0.47
KNTC1-209ENST00000536625 STK24Q9Y6E0 443 aa12.09□□□□□ -0.47
KNTC1-209ENST00000536625 C2orf72A6NCS6 295 aa12.08□□□□□ -0.48
KNTC1-209ENST00000536625 NUDT7P0C024 238 aa12.07□□□□□ -0.48
KNTC1-209ENST00000536625 POTEEQ6S8J3 1075 aa12.06□□□□□ -0.48
KNTC1-209ENST00000536625 LHX6Q9UPM6 363 aa12.02□□□□□ -0.49
KNTC1-209ENST00000536625 AXIN2Q9Y2T1 843 aa12.02□□□□□ -0.49
KNTC1-209ENST00000536625 STK25O00506 426 aa12.01□□□□□ -0.49
KNTC1-209ENST00000536625 PCDHGA4Q9Y5G9 962 aa12□□□□□ -0.49
KNTC1-209ENST00000536625 TAOK2Q9UL54 1235 aa11.98□□□□□ -0.49
KNTC1-209ENST00000536625 PBX2P40425 430 aa11.97□□□□□ -0.49
KNTC1-209ENST00000536625 SLC34A2O95436 690 aa11.96□□□□□ -0.49
KNTC1-209ENST00000536625 PPP1R37O75864 691 aa11.92□□□□□ -0.5
KNTC1-209ENST00000536625 ECM2O94769 699 aaPredicted RBP11.92□□□□□ -0.5
KNTC1-209ENST00000536625 RGL2O15211 777 aa11.9□□□□□ -0.5
KNTC1-209ENST00000536625 TMC2Q8TDI7 906 aa11.9□□□□□ -0.5
KNTC1-209ENST00000536625 KDM4FA0A1W2PPD8 638 aa11.88□□□□□ -0.51
KNTC1-209ENST00000536625 ADGRD1Q6QNK2 874 aa11.87□□□□□ -0.51
KNTC1-209ENST00000536625 PKD2Q13563 968 aa11.86□□□□□ -0.51
KNTC1-209ENST00000536625 PLA2G2EQ9NZK7 142 aa11.86□□□□□ -0.51
KNTC1-209ENST00000536625 ARHGAP33O14559 1287 aa11.84□□□□□ -0.51
KNTC1-209ENST00000536625 DMRTA1Q5VZB9 504 aa11.83□□□□□ -0.52
KNTC1-209ENST00000536625 HCSTQ9UBK5 93 aa11.82□□□□□ -0.52
KNTC1-209ENST00000536625 PSEN2P49810 448 aa11.81□□□□□ -0.52
KNTC1-209ENST00000536625 PTCD2Q8WV60 388 aaKnown RBP11.8□□□□□ -0.52
KNTC1-209ENST00000536625 HRO43593 1189 aa11.79□□□□□ -0.52
KNTC1-209ENST00000536625 PSDA5PKW4 1024 aaPredicted RBP11.77□□□□□ -0.53
KNTC1-209ENST00000536625 TK2O00142 265 aa11.75□□□□□ -0.53
KNTC1-209ENST00000536625 PLPP6Q8IY26 295 aa11.75□□□□□ -0.53
KNTC1-209ENST00000536625 FOXK1P85037 733 aa11.73□□□□□ -0.53
KNTC1-209ENST00000536625 DSG2Q14126 1118 aa11.71□□□□□ -0.53
KNTC1-209ENST00000536625 KCTD12Q96CX2 325 aaKnown RBP11.7□□□□□ -0.54
KNTC1-209ENST00000536625 GPHNQ9NQX3 736 aaPredicted RBP11.7□□□□□ -0.54
KNTC1-209ENST00000536625 PPP4R3BQ5MIZ7 849 aa11.68□□□□□ -0.54
KNTC1-209ENST00000536625 KCNK17Q96T54 332 aa11.66□□□□□ -0.54
KNTC1-209ENST00000536625 VPS9D1Q9Y2B5 631 aa11.62□□□□□ -0.55
KNTC1-209ENST00000536625 TBC1D12O60347 775 aa11.61□□□□□ -0.55
KNTC1-209ENST00000536625 HS6ST3Q8IZP7 471 aa11.61□□□□□ -0.55
KNTC1-209ENST00000536625 OXER1Q8TDS5 423 aa11.59□□□□□ -0.55
KNTC1-209ENST00000536625 STAC3Q96MF2 364 aa11.58□□□□□ -0.56
KNTC1-209ENST00000536625 UPF1Q92900 1129 aaKnown RBP eCLIP11.57□□□□□ -0.56
KNTC1-209ENST00000536625 PTPN5P54829 565 aa11.56□□□□□ -0.56
KNTC1-209ENST00000536625 ZNF454Q8N9F8 522 aa11.55□□□□□ -0.56
KNTC1-209ENST00000536625 NKX1-1Q15270 411 aaPredicted RBP11.53□□□□□ -0.56
KNTC1-209ENST00000536625 KCNH8Q96L42 1107 aa11.53□□□□□ -0.56
KNTC1-209ENST00000536625 BCL2L12Q9HB09 334 aa11.52□□□□□ -0.57
KNTC1-209ENST00000536625 BHMG1C9JSJ3 638 aaPredicted RBP11.51□□□□□ -0.57
KNTC1-209ENST00000536625 SLC4A5Q9BY07 1137 aa11.51□□□□□ -0.57
KNTC1-209ENST00000536625 CRISPLD2Q9H0B8 497 aa11.51□□□□□ -0.57
KNTC1-209ENST00000536625 CHGAP10645 457 aaKnown RBP11.5□□□□□ -0.57
KNTC1-209ENST00000536625 FOSBP53539 338 aa11.5□□□□□ -0.57
KNTC1-209ENST00000536625 RTN4Q9NQC3 1192 aaKnown RBP11.5□□□□□ -0.57
KNTC1-209ENST00000536625 THSD4Q6ZMP0 1018 aa11.49□□□□□ -0.57
KNTC1-209ENST00000536625 PPP1R15BQ5SWA1 713 aa11.47□□□□□ -0.57
KNTC1-209ENST00000536625 ZBED2Q9BTP6 218 aa11.47□□□□□ -0.57
KNTC1-209ENST00000536625 NCKAP5LQ9HCH0 1330 aa11.46□□□□□ -0.57
KNTC1-209ENST00000536625 PTPREP23469 700 aa11.45□□□□□ -0.58
KNTC1-209ENST00000536625 AMER1Q5JTC6 1135 aaPredicted RBP11.45□□□□□ -0.58
KNTC1-209ENST00000536625 IFFO2Q5TF58 517 aa11.45□□□□□ -0.58
KNTC1-209ENST00000536625 WNT2BQ93097 391 aa11.43□□□□□ -0.58
KNTC1-209ENST00000536625 DNAJC5Q9H3Z4 198 aa11.43□□□□□ -0.58
KNTC1-209ENST00000536625 ANO8Q9HCE9 1232 aaPredicted RBP11.43□□□□□ -0.58
KNTC1-209ENST00000536625 ADAM33Q9BZ11 813 aa11.42□□□□□ -0.58
KNTC1-209ENST00000536625 A0A0G2JS52 829 aa11.41□□□□□ -0.58
KNTC1-209ENST00000536625 JPH4Q96JJ6 628 aa11.41□□□□□ -0.58
KNTC1-209ENST00000536625 EVI5O60447 810 aa11.4□□□□□ -0.58
KNTC1-209ENST00000536625 RGS20O76081 388 aa11.4□□□□□ -0.58
KNTC1-209ENST00000536625 MRPL50Q8N5N7 158 aaKnown RBP11.4□□□□□ -0.58
KNTC1-209ENST00000536625 GOLGA8CPA6NN73 597 aa11.38□□□□□ -0.59
KNTC1-209ENST00000536625 ZDHHC16Q969W1 377 aa11.38□□□□□ -0.59
KNTC1-209ENST00000536625 IRX2Q9BZI1 471 aaPredicted RBP11.36□□□□□ -0.59
KNTC1-209ENST00000536625 PDE4AP27815 886 aa11.34□□□□□ -0.59
KNTC1-209ENST00000536625 PROX2Q3B8N5 592 aa11.32□□□□□ -0.6
KNTC1-209ENST00000536625 NBPF3Q9H094 633 aa11.32□□□□□ -0.6
KNTC1-209ENST00000536625 RYDENQ9NUL5 291 aaKnown RBP11.32□□□□□ -0.6
KNTC1-209ENST00000536625 COL9A1P20849 921 aa11.31□□□□□ -0.6
KNTC1-209ENST00000536625 LARP6Q9BRS8 491 aaKnown RBP11.31□□□□□ -0.6
KNTC1-209ENST00000536625 EMILIN3Q9NT22 766 aa11.3□□□□□ -0.6
KNTC1-209ENST00000536625 PCDHGA10Q9Y5H3 936 aa11.29□□□□□ -0.6
KNTC1-209ENST00000536625 PPP1R3GB7ZBB8 358 aa11.28□□□□□ -0.6
KNTC1-209ENST00000536625 GTPBP6O43824 516 aaPredicted RBP11.28□□□□□ -0.6
KNTC1-209ENST00000536625 DDX27Q96GQ7 796 aaKnown RBP11.28□□□□□ -0.6
KNTC1-209ENST00000536625 MAP3K9P80192 1104 aa11.27□□□□□ -0.61
KNTC1-209ENST00000536625 MFSD10Q14728 455 aa11.27□□□□□ -0.61
KNTC1-209ENST00000536625 RABGEF1Q9UJ41 708 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms