RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 DNMT1P26358 1616 aaKnown RBP25.11■■□□□ 1.61
RAB40C-203ENST00000535977 FBLN2P98095 1184 aa25.11■■□□□ 1.61
RAB40C-203ENST00000535977 CARMIL2Q6F5E8 1435 aa25.1■■□□□ 1.61
RAB40C-203ENST00000535977 TROQ12816 1431 aaPredicted RBP25.09■■□□□ 1.61
RAB40C-203ENST00000535977 MPHOSPH9Q99550 1183 aa25.09■■□□□ 1.61
RAB40C-203ENST00000535977 KDM5BQ9UGL1 1544 aa25.08■■□□□ 1.61
RAB40C-203ENST00000535977 ANP32CO43423 234 aa25.08■■□□□ 1.61
RAB40C-203ENST00000535977 CEP170Q5SW79 1584 aa25.07■■□□□ 1.6
RAB40C-203ENST00000535977 KCNH8Q96L42 1107 aa25.07■■□□□ 1.6
RAB40C-203ENST00000535977 ABCC5O15440 1437 aa25.06■■□□□ 1.6
RAB40C-203ENST00000535977 NUP160Q12769 1436 aa25.06■■□□□ 1.6
RAB40C-203ENST00000535977 DENND4BO75064 1496 aaPredicted RBP25.06■■□□□ 1.6
RAB40C-203ENST00000535977 ARID3CA6NKF2 412 aa25.06■■□□□ 1.6
RAB40C-203ENST00000535977 KDM6BO15054 1643 aa25.04■■□□□ 1.6
RAB40C-203ENST00000535977 ERICH6Q7L0X2 663 aa25.03■■□□□ 1.6
RAB40C-203ENST00000535977 ITSN2Q9NZM3 1697 aa25.03■■□□□ 1.6
RAB40C-203ENST00000535977 ADCY10Q96PN6 1610 aa25.01■■□□□ 1.59
RAB40C-203ENST00000535977 JPH4Q96JJ6 628 aa25■■□□□ 1.59
RAB40C-203ENST00000535977 HIRIP3Q9BW71 556 aaPredicted RBP24.99■■□□□ 1.59
RAB40C-203ENST00000535977 PRG4Q92954 1404 aaPredicted RBP24.96■■□□□ 1.59
RAB40C-203ENST00000535977 CFDP1Q9UEE9 299 aaPredicted RBP24.96■■□□□ 1.59
RAB40C-203ENST00000535977 PLB1Q6P1J6 1458 aa24.96■■□□□ 1.59
RAB40C-203ENST00000535977 ANKRD30BQ9BXX2 1392 aa24.95■■□□□ 1.58
RAB40C-203ENST00000535977 CAMSAP2Q08AD1 1489 aa24.94■■□□□ 1.58
RAB40C-203ENST00000535977 GPATCH8Q9UKJ3 1502 aaKnown RBP24.94■■□□□ 1.58
RAB40C-203ENST00000535977 ZNF644Q9H582 1327 aaPredicted RBP24.93■■□□□ 1.58
RAB40C-203ENST00000535977 RPRD2Q5VT52 1461 aaKnown RBP24.92■■□□□ 1.58
RAB40C-203ENST00000535977 EIF4G2P78344 907 aaKnown RBP eCLIP24.92■■□□□ 1.581e-6■■■■□ 25.9
RAB40C-203ENST00000535977 ADGRL2O95490 1459 aa24.91■■□□□ 1.58
RAB40C-203ENST00000535977 ADGBQ8N7X0 1667 aa24.9■■□□□ 1.58
RAB40C-203ENST00000535977 NEFLP07196 543 aa24.9■■□□□ 1.58
RAB40C-203ENST00000535977 NCOA1Q15788 1441 aa24.88■■□□□ 1.57
RAB40C-203ENST00000535977 L3MBTL2Q969R5 705 aa24.88■■□□□ 1.57
RAB40C-203ENST00000535977 ABCA8O94911 1581 aa24.88■■□□□ 1.57
RAB40C-203ENST00000535977 HSPA5P11021 654 aaKnown RBP24.88■■□□□ 1.57
RAB40C-203ENST00000535977 PLEKHD1A6NEE1 506 aa24.87■■□□□ 1.57
RAB40C-203ENST00000535977 SLC4A1APQ9BWU0 796 aaKnown RBP24.87■■□□□ 1.57
RAB40C-203ENST00000535977 FANCIQ9NVI1 1328 aa24.86■■□□□ 1.57
RAB40C-203ENST00000535977 ANKRD30AQ9BXX3 1397 aa24.84■■□□□ 1.57
RAB40C-203ENST00000535977 CROCC2H7BZ55 1655 aa24.84■■□□□ 1.57
RAB40C-203ENST00000535977 KIF14Q15058 1648 aa24.84■■□□□ 1.57
RAB40C-203ENST00000535977 TEX14Q8IWB6 1497 aa24.8■■□□□ 1.56
RAB40C-203ENST00000535977 DEKP35659 375 aaKnown RBP24.79■■□□□ 1.56
RAB40C-203ENST00000535977 ATP10BO94823 1461 aa24.79■■□□□ 1.56
RAB40C-203ENST00000535977 FOXD1Q16676 465 aa24.79■■□□□ 1.56
RAB40C-203ENST00000535977 PZPP20742 1482 aa24.79■■□□□ 1.56
RAB40C-203ENST00000535977 SHANK2Q9UPX8 1470 aa24.79■■□□□ 1.56
RAB40C-203ENST00000535977 WASHC2AQ641Q2 1341 aa24.79■■□□□ 1.56
RAB40C-203ENST00000535977 ANO8Q9HCE9 1232 aaPredicted RBP24.78■■□□□ 1.56
RAB40C-203ENST00000535977 ABCC10Q5T3U5 1492 aa24.78■■□□□ 1.56
RAB40C-203ENST00000535977 MYT1LQ9UL68 1186 aa24.77■■□□□ 1.56
RAB40C-203ENST00000535977 ZNF777Q9ULD5 760 aaPredicted RBP24.76■■□□□ 1.55
RAB40C-203ENST00000535977 CHD1O14646 1710 aa24.75■■□□□ 1.55
RAB40C-203ENST00000535977 KIAA1107Q9UPP5 1409 aa24.75■■□□□ 1.55
RAB40C-203ENST00000535977 CDC42BPAQ5VT25 1732 aa24.74■■□□□ 1.55
RAB40C-203ENST00000535977 CNTLNQ9NXG0 1405 aa24.72■■□□□ 1.55
RAB40C-203ENST00000535977 ANKRD50Q9ULJ7 1429 aa24.72■■□□□ 1.55
RAB40C-203ENST00000535977 OSCARQ8IYS5 282 aa24.71■■□□□ 1.55
RAB40C-203ENST00000535977 PTPRGP23470 1445 aa24.7■■□□□ 1.55
RAB40C-203ENST00000535977 CCDC7Q96M83 1385 aa24.69■■□□□ 1.54
RAB40C-203ENST00000535977 NBPF8Q3BBV2 869 aa24.69■■□□□ 1.54
RAB40C-203ENST00000535977 TSPY4P0CV99 314 aa24.68■■□□□ 1.54
RAB40C-203ENST00000535977 TSPY10P0CW01 314 aa24.68■■□□□ 1.54
RAB40C-203ENST00000535977 C9orf84Q5VXU9 1444 aa24.67■■□□□ 1.54
RAB40C-203ENST00000535977 SPATA31E1Q6ZUB1 1445 aa24.67■■□□□ 1.54
RAB40C-203ENST00000535977 ARHGEF5Q12774 1597 aa24.67■■□□□ 1.54
RAB40C-203ENST00000535977 RSPH4AQ5TD94 716 aa24.66■■□□□ 1.54
RAB40C-203ENST00000535977 PKD2Q13563 968 aa24.63■■□□□ 1.53
RAB40C-203ENST00000535977 POLR1AO95602 1720 aaPredicted RBP24.63■■□□□ 1.53
RAB40C-203ENST00000535977 KDM5DQ9BY66 1539 aa24.63■■□□□ 1.53
RAB40C-203ENST00000535977 MBD5Q9P267 1494 aa24.63■■□□□ 1.53
RAB40C-203ENST00000535977 NUP155O75694 1391 aa24.58■■□□□ 1.53
RAB40C-203ENST00000535977 C11orf95C9JLR9 678 aaPredicted RBP24.56■■□□□ 1.52
RAB40C-203ENST00000535977 ARID4BQ4LE39 1312 aaPredicted RBP24.56■■□□□ 1.52
RAB40C-203ENST00000535977 UHRF1BP1Q6BDS2 1440 aa24.55■■□□□ 1.52
RAB40C-203ENST00000535977 SHROOM2Q13796 1616 aa24.55■■□□□ 1.52
RAB40C-203ENST00000535977 CCDC141Q6ZP82 1450 aa24.54■■□□□ 1.52
RAB40C-203ENST00000535977 PRKRIP1Q9H875 184 aaPredicted RBP24.54■■□□□ 1.52
RAB40C-203ENST00000535977 KIF15Q9NS87 1388 aa24.54■■□□□ 1.52
RAB40C-203ENST00000535977 ARHGEF12Q9NZN5 1544 aa24.54■■□□□ 1.52
RAB40C-203ENST00000535977 PREX2Q70Z35 1606 aa24.54■■□□□ 1.52
RAB40C-203ENST00000535977 KIF7Q2M1P5 1343 aa24.53■■□□□ 1.52
RAB40C-203ENST00000535977 SALL2Q9Y467 1007 aaPredicted RBP24.52■■□□□ 1.52
RAB40C-203ENST00000535977 HNRNPUQ00839 825 aaKnown RBP eCLIP24.51■■□□□ 1.51
RAB40C-203ENST00000535977 HNRNPMP52272 730 aaKnown RBP eCLIP24.5■■□□□ 1.51
RAB40C-203ENST00000535977 CDC42BPBQ9Y5S2 1711 aa24.49■■□□□ 1.51
RAB40C-203ENST00000535977 SAMD9LQ8IVG5 1584 aa24.48■■□□□ 1.51
RAB40C-203ENST00000535977 USP47Q96K76 1375 aa24.47■■□□□ 1.51
RAB40C-203ENST00000535977 RALGAPBQ86X10 1494 aa24.46■■□□□ 1.51
RAB40C-203ENST00000535977 MAST1Q9Y2H9 1570 aa24.46■■□□□ 1.51
RAB40C-203ENST00000535977 PLEKHH2Q8IVE3 1493 aa24.46■■□□□ 1.51
RAB40C-203ENST00000535977 ERICH6BQ5W0A0 696 aa24.43■■□□□ 1.5
RAB40C-203ENST00000535977 KDM5CP41229 1560 aa24.43■■□□□ 1.5
RAB40C-203ENST00000535977 ROCK2O75116 1388 aaKnown RBP24.43■■□□□ 1.5
RAB40C-203ENST00000535977 ABCC2Q92887 1545 aa24.43■■□□□ 1.5
RAB40C-203ENST00000535977 IRX6P78412 446 aaPredicted RBP24.42■■□□□ 1.5
RAB40C-203ENST00000535977 NBR1Q14596 966 aa24.4■■□□□ 1.5
RAB40C-203ENST00000535977 MRS2Q9HD23 443 aa24.4■■□□□ 1.5
RAB40C-203ENST00000535977 CLASP1Q7Z460 1538 aa24.39■■□□□ 1.5
RAB40C-203ENST00000535977 ARHGAP5Q13017 1502 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms