RNA–Protein interactions for RNA: ENST00000535731.1

LRP6-202, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-202ENST00000535731 EEA1Q15075 1411 aa32.77■■■□□ 2.84
LRP6-202ENST00000535731 ATP10AO60312 1499 aa32.77■■■□□ 2.84
LRP6-202ENST00000535731 DMRT2Q9Y5R5 561 aa32.76■■■□□ 2.83
LRP6-202ENST00000535731 EFCAB2Q5VUJ9 269 aa32.74■■■□□ 2.83
LRP6-202ENST00000535731 FER1L4A9Z1Z3 1794 aa32.73■■■□□ 2.83
LRP6-202ENST00000535731 CEBPAP49715 358 aaPredicted RBP32.73■■■□□ 2.83
LRP6-202ENST00000535731 ARHGEF12Q9NZN5 1544 aa32.72■■■□□ 2.83
LRP6-202ENST00000535731 C9orf84Q5VXU9 1444 aa32.7■■■□□ 2.83
LRP6-202ENST00000535731 CDK13Q14004 1512 aaKnown RBP32.68■■■□□ 2.82
LRP6-202ENST00000535731 DISP3Q9P2K9 1392 aa32.66■■■□□ 2.82
LRP6-202ENST00000535731 ILDR2Q71H61 639 aa32.63■■■□□ 2.81
LRP6-202ENST00000535731 ATP1B4Q9UN42 357 aaPredicted RBP32.63■■■□□ 2.81
LRP6-202ENST00000535731 CDK11AQ9UQ88 783 aaPredicted RBP32.63■■■□□ 2.81
LRP6-202ENST00000535731 PREX1Q8TCU6 1659 aa32.62■■■□□ 2.81
LRP6-202ENST00000535731 SOCS7O14512 581 aa32.59■■■□□ 2.81
LRP6-202ENST00000535731 AFAP1Q8N556 730 aa32.58■■■□□ 2.81
LRP6-202ENST00000535731 UHRF1BP1Q6BDS2 1440 aa32.58■■■□□ 2.81
LRP6-202ENST00000535731 MYT1LQ9UL68 1186 aa32.55■■■□□ 2.8
LRP6-202ENST00000535731 ZNF518AQ6AHZ1 1483 aa32.54■■■□□ 2.8
LRP6-202ENST00000535731 STRCQ7RTU9 1775 aa32.53■■■□□ 2.8
LRP6-202ENST00000535731 SETD1BQ9UPS6 1966 aaKnown RBP32.52■■■□□ 2.8
LRP6-202ENST00000535731 FMN1Q68DA7 1419 aa32.51■■■□□ 2.79
LRP6-202ENST00000535731 PTPRTO14522 1441 aa32.49■■■□□ 2.79
LRP6-202ENST00000535731 MYO5CQ9NQX4 1742 aa32.48■■■□□ 2.79
LRP6-202ENST00000535731 ESF1Q9H501 851 aaKnown RBP32.46■■■□□ 2.79
LRP6-202ENST00000535731 UBTFP17480 764 aaKnown RBP32.44■■■□□ 2.78
LRP6-202ENST00000535731 KDM5CP41229 1560 aa32.44■■■□□ 2.78
LRP6-202ENST00000535731 TROQ12816 1431 aaPredicted RBP32.43■■■□□ 2.78
LRP6-202ENST00000535731 ARHGAP5Q13017 1502 aa32.43■■■□□ 2.78
LRP6-202ENST00000535731 CLIP1P30622 1438 aa32.39■■■□□ 2.78
LRP6-202ENST00000535731 KIF14Q15058 1648 aa32.39■■■□□ 2.78
LRP6-202ENST00000535731 REREQ9P2R6 1566 aa32.38■■■□□ 2.77
LRP6-202ENST00000535731 MLH3Q9UHC1 1453 aa32.38■■■□□ 2.77
LRP6-202ENST00000535731 TRAPPC8Q9Y2L5 1435 aa32.38■■■□□ 2.77
LRP6-202ENST00000535731 DIP2CQ9Y2E4 1556 aa32.37■■■□□ 2.77
LRP6-202ENST00000535731 EHMT2Q96KQ7 1210 aa32.35■■■□□ 2.77
LRP6-202ENST00000535731 ARHGAP35Q9NRY4 1499 aa32.35■■■□□ 2.77
LRP6-202ENST00000535731 AGLP35573 1532 aa32.33■■■□□ 2.77
LRP6-202ENST00000535731 C3P01024 1663 aa32.31■■■□□ 2.76
LRP6-202ENST00000535731 LTBP4Q8N2S1 1624 aa32.29■■■□□ 2.76
LRP6-202ENST00000535731 IQSEC2Q5JU85 1478 aa32.29■■■□□ 2.76
LRP6-202ENST00000535731 CNTLNQ9NXG0 1405 aa32.27■■■□□ 2.76
LRP6-202ENST00000535731 ABCA6Q8N139 1617 aa32.27■■■□□ 2.76
LRP6-202ENST00000535731 SPATA31D1Q6ZQQ2 1576 aa32.26■■■□□ 2.75
LRP6-202ENST00000535731 NCOA1Q15788 1441 aa32.26■■■□□ 2.75
LRP6-202ENST00000535731 CDC42BPBQ9Y5S2 1711 aa32.22■■■□□ 2.75
LRP6-202ENST00000535731 ABCC1P33527 1531 aa32.18■■■□□ 2.74
LRP6-202ENST00000535731 NPATQ14207 1427 aa32.17■■■□□ 2.74
LRP6-202ENST00000535731 ZMYM3Q14202 1370 aa32.16■■■□□ 2.74
LRP6-202ENST00000535731 PREX2Q70Z35 1606 aa32.13■■■□□ 2.73
LRP6-202ENST00000535731 NCKAP5LQ9HCH0 1330 aa32.13■■■□□ 2.73
LRP6-202ENST00000535731 KIDINS220Q9ULH0 1771 aa32.12■■■□□ 2.73
LRP6-202ENST00000535731 CAMSAP1Q5T5Y3 1602 aa32.12■■■□□ 2.73
LRP6-202ENST00000535731 LRRIQ1Q96JM4 1722 aa32.1■■■□□ 2.73
LRP6-202ENST00000535731 ITSN2Q9NZM3 1697 aa32.1■■■□□ 2.73
LRP6-202ENST00000535731 UBAP1LF5GYI3 381 aa32.09■■■□□ 2.73
LRP6-202ENST00000535731 ZNF335Q9H4Z2 1342 aaPredicted RBP32.08■■■□□ 2.73
LRP6-202ENST00000535731 PKD2Q13563 968 aa32.08■■■□□ 2.73
LRP6-202ENST00000535731 ZNF777Q9ULD5 760 aaPredicted RBP32.08■■■□□ 2.73
LRP6-202ENST00000535731 CCDC18Q5T9S5 1454 aa32.08■■■□□ 2.73
LRP6-202ENST00000535731 CASKIN1Q8WXD9 1431 aa32.07■■■□□ 2.72
LRP6-202ENST00000535731 SPAG9O60271 1321 aaKnown RBP32.06■■■□□ 2.72
LRP6-202ENST00000535731 MROH2AA6NES4 1674 aa32.03■■■□□ 2.72
LRP6-202ENST00000535731 HNRNPMP52272 730 aaKnown RBP eCLIP32.03■■■□□ 2.721e-6■■■■□ 23.4
LRP6-202ENST00000535731 SAMD9LQ8IVG5 1584 aa32.02■■■□□ 2.72
LRP6-202ENST00000535731 PLA2R1Q13018 1463 aa31.97■■■□□ 2.71
LRP6-202ENST00000535731 CDC42BPAQ5VT25 1732 aa31.97■■■□□ 2.71
LRP6-202ENST00000535731 GGT6Q6P531 493 aa31.95■■■□□ 2.71
LRP6-202ENST00000535731 PPP6R1Q9UPN7 881 aa31.95■■■□□ 2.71
LRP6-202ENST00000535731 PTPRKQ15262 1439 aa31.93■■■□□ 2.7
LRP6-202ENST00000535731 GPATCH8Q9UKJ3 1502 aaKnown RBP31.93■■■□□ 2.7
LRP6-202ENST00000535731 TCOF1Q13428 1488 aaKnown RBP31.92■■■□□ 2.7
LRP6-202ENST00000535731 KIAA1107Q9UPP5 1409 aa31.92■■■□□ 2.7
LRP6-202ENST00000535731 SYCP2Q9BX26 1530 aa31.91■■■□□ 2.7
LRP6-202ENST00000535731 SUPT6HQ7KZ85 1726 aaKnown RBP31.91■■■□□ 2.7
LRP6-202ENST00000535731 A2MP01023 1474 aa31.91■■■□□ 2.7
LRP6-202ENST00000535731 CFDP1Q9UEE9 299 aaPredicted RBP31.9■■■□□ 2.7
LRP6-202ENST00000535731 ATP7AQ04656 1500 aa31.87■■■□□ 2.69
LRP6-202ENST00000535731 CLTCQ00610 1675 aaKnown RBP31.86■■■□□ 2.69
LRP6-202ENST00000535731 CEP170BQ9Y4F5 1589 aaPredicted RBP31.86■■■□□ 2.69
LRP6-202ENST00000535731 PLEKHH2Q8IVE3 1493 aa31.86■■■□□ 2.69
LRP6-202ENST00000535731 ZNF142P52746 1687 aaPredicted RBP31.86■■■□□ 2.69
LRP6-202ENST00000535731 FYCO1Q9BQS8 1478 aa31.84■■■□□ 2.69
LRP6-202ENST00000535731 CHIC1Q5VXU3 224 aa31.84■■■□□ 2.69
LRP6-202ENST00000535731 MYO3AQ8NEV4 1616 aa31.84■■■□□ 2.69
LRP6-202ENST00000535731 PLXNC1O60486 1568 aa31.83■■■□□ 2.69
LRP6-202ENST00000535731 CCNB3Q8WWL7 1395 aa31.8■■■□□ 2.68
LRP6-202ENST00000535731 TOM1O60784 492 aa31.79■■■□□ 2.68
LRP6-202ENST00000535731 HSPA1LP34931 641 aa31.79■■■□□ 2.68
LRP6-202ENST00000535731 A2ML1A8K2U0 1454 aa31.78■■■□□ 2.68
LRP6-202ENST00000535731 SCAF1Q9H7N4 1312 aaKnown RBP31.77■■■□□ 2.68
LRP6-202ENST00000535731 INO80Q9ULG1 1556 aaPredicted RBP31.77■■■□□ 2.68
LRP6-202ENST00000535731 PIP4K2BP78356 416 aa31.76■■■□□ 2.67
LRP6-202ENST00000535731 DNMT1P26358 1616 aaKnown RBP31.7■■■□□ 2.66
LRP6-202ENST00000535731 ZNF644Q9H582 1327 aaPredicted RBP31.68■■■□□ 2.66
LRP6-202ENST00000535731 DHX29Q7Z478 1369 aaKnown RBP31.68■■■□□ 2.66
LRP6-202ENST00000535731 CPS1P31327 1500 aa31.67■■■□□ 2.66
LRP6-202ENST00000535731 FBXO31Q5XUX0 539 aaPredicted RBP31.67■■■□□ 2.66
LRP6-202ENST00000535731 MTUS2Q5JR59 1369 aa31.67■■■□□ 2.66
LRP6-202ENST00000535731 ANKLE2Q86XL3 938 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms