RNA–Protein interactions for RNA: ENST00000535622.5

DEPDC5-222, Transcript of DEP domain containing 5, human

TSL 2 BASIC

Gene DEPDC5, Length 5,155 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DEPDC5-222	ENST00000535622	DEK	P35659	375 aa	Known RBP	14.13	□□□□□ -0.15
DEPDC5-222	ENST00000535622	HMGXB3	Q12766	1538 aa		14.12	□□□□□ -0.15
DEPDC5-222	ENST00000535622	RCAN3	Q9UKA8	241 aa		14.12	□□□□□ -0.15
DEPDC5-222	ENST00000535622	ATAD2B	Q9ULI0	1458 aa		14.12	□□□□□ -0.15
DEPDC5-222	ENST00000535622	SENP3	Q9H4L4	574 aa	Predicted RBP	14.12	□□□□□ -0.15
DEPDC5-222	ENST00000535622	MORC1	Q86VD1	984 aa		14.11	□□□□□ -0.15
DEPDC5-222	ENST00000535622	CARMIL2	Q6F5E8	1435 aa		14.11	□□□□□ -0.15
DEPDC5-222	ENST00000535622	DNTTIP2	Q5QJE6	756 aa	Known RBP	14.11	□□□□□ -0.15
DEPDC5-222	ENST00000535622	NAP1L5	Q96NT1	182 aa	Predicted RBP	14.11	□□□□□ -0.15
DEPDC5-222	ENST00000535622	ANKRD30A	Q9BXX3	1397 aa		14.11	□□□□□ -0.15
DEPDC5-222	ENST00000535622	HAP1	P54257	671 aa	Predicted RBP	14.11	□□□□□ -0.15
DEPDC5-222	ENST00000535622	RAPGEF2	Q9Y4G8	1499 aa		14.1	□□□□□ -0.15
DEPDC5-222	ENST00000535622	TSHZ2	Q9NRE2	1034 aa		14.1	□□□□□ -0.15
DEPDC5-222	ENST00000535622	ARID4B	Q4LE39	1312 aa	Predicted RBP	14.1	□□□□□ -0.15
DEPDC5-222	ENST00000535622	ROCK2	O75116	1388 aa	Known RBP	14.09	□□□□□ -0.15
DEPDC5-222	ENST00000535622	CDK11B	P21127	795 aa	Known RBP	14.09	□□□□□ -0.15
DEPDC5-222	ENST00000535622	PEG3	Q9GZU2	1588 aa		14.08	□□□□□ -0.16
DEPDC5-222	ENST00000535622	DHX57	Q6P158	1386 aa	Known RBP	14.07	□□□□□ -0.16
DEPDC5-222	ENST00000535622	PDE3B	Q13370	1112 aa		14.07	□□□□□ -0.16
DEPDC5-222	ENST00000535622	NUP155	O75694	1391 aa		14.06	□□□□□ -0.16
DEPDC5-222	ENST00000535622	PDS5B	Q9NTI5	1447 aa		14.06	□□□□□ -0.16
DEPDC5-222	ENST00000535622	IPO8	O15397	1037 aa	Known RBP	14.06	□□□□□ -0.16
DEPDC5-222	ENST00000535622	FOXD1	Q16676	465 aa		14.06	□□□□□ -0.16
DEPDC5-222	ENST00000535622	PTMS	P20962	102 aa		14.06	□□□□□ -0.16
DEPDC5-222	ENST00000535622	RTN4	Q9NQC3	1192 aa	Known RBP	14.06	□□□□□ -0.16
DEPDC5-222	ENST00000535622	MCC	P23508	829 aa		14.04	□□□□□ -0.16
DEPDC5-222	ENST00000535622	EIF3A	Q14152	1382 aa	Known RBP	14.04	□□□□□ -0.16
DEPDC5-222	ENST00000535622	RWDD1	Q9H446	243 aa	Predicted RBP	14.04	□□□□□ -0.16
DEPDC5-222	ENST00000535622	HDGF	P51858	240 aa	Known RBP	14.03	□□□□□ -0.16
DEPDC5-222	ENST00000535622	L3MBTL2	Q969R5	705 aa		14.03	□□□□□ -0.16
DEPDC5-222	ENST00000535622	GOLGA6L6	A8MZA4	724 aa		14.03	□□□□□ -0.16
DEPDC5-222	ENST00000535622	SRPK2	P78362	688 aa	Known RBP	14.03	□□□□□ -0.16
DEPDC5-222	ENST00000535622	PHLDB1	Q86UU1	1377 aa		14.03	□□□□□ -0.16
DEPDC5-222	ENST00000535622	CCDC18	Q5T9S5	1454 aa		14.02	□□□□□ -0.16
DEPDC5-222	ENST00000535622	CALD1	Q05682	793 aa	Known RBP	14.02	□□□□□ -0.17
DEPDC5-222	ENST00000535622	OS9	Q13438	667 aa	Predicted RBP	14.02	□□□□□ -0.17
DEPDC5-222	ENST00000535622	NLRP13	Q86W25	1043 aa		14.02	□□□□□ -0.17
DEPDC5-222	ENST00000535622	IPO9	Q96P70	1041 aa	Known RBP	14.02	□□□□□ -0.17
DEPDC5-222	ENST00000535622	PMFBP1	Q8TBY8	1022 aa		14.01	□□□□□ -0.17
DEPDC5-222	ENST00000535622	FHOD3	Q2V2M9	1422 aa		14	□□□□□ -0.17
DEPDC5-222	ENST00000535622	RSPH4A	Q5TD94	716 aa		14	□□□□□ -0.17
DEPDC5-222	ENST00000535622	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.99	□□□□□ -0.17
DEPDC5-222	ENST00000535622	NRDC	O43847	1150 aa		13.99	□□□□□ -0.17
DEPDC5-222	ENST00000535622	GBP4	Q96PP9	640 aa		13.99	□□□□□ -0.17
DEPDC5-222	ENST00000535622	KCNJ4	P48050	445 aa		13.99	□□□□□ -0.17
DEPDC5-222	ENST00000535622	MSN	P26038	577 aa	Known RBP	13.98	□□□□□ -0.17
DEPDC5-222	ENST00000535622	TDRD9	Q8NDG6	1382 aa	Known RBP	13.98	□□□□□ -0.17
DEPDC5-222	ENST00000535622	KIF15	Q9NS87	1388 aa		13.98	□□□□□ -0.17
DEPDC5-222	ENST00000535622		A0A0G2JS52	829 aa		13.98	□□□□□ -0.17
DEPDC5-222	ENST00000535622	PLEKHG5	O94827	1062 aa		13.98	□□□□□ -0.17
DEPDC5-222	ENST00000535622	GOLGA2	Q08379	1002 aa		13.98	□□□□□ -0.17
DEPDC5-222	ENST00000535622	PLCB2	Q00722	1185 aa		13.97	□□□□□ -0.17
DEPDC5-222	ENST00000535622	EFCAB2	Q5VUJ9	269 aa		13.97	□□□□□ -0.17
DEPDC5-222	ENST00000535622	CADPS	Q9ULU8	1353 aa		13.97	□□□□□ -0.17
DEPDC5-222	ENST00000535622	FGD1	P98174	961 aa		13.97	□□□□□ -0.17
DEPDC5-222	ENST00000535622	TPRN	Q4KMQ1	711 aa		13.97	□□□□□ -0.17
DEPDC5-222	ENST00000535622	GOLGA6L4	A6NEF3	574 aa		13.96	□□□□□ -0.17
DEPDC5-222	ENST00000535622	CHAF1A	Q13111	956 aa	Predicted RBP	13.95	□□□□□ -0.18
DEPDC5-222	ENST00000535622	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.95	□□□□□ -0.18
DEPDC5-222	ENST00000535622	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
DEPDC5-222	ENST00000535622	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.95	□□□□□ -0.18
DEPDC5-222	ENST00000535622	RTF1	Q92541	710 aa	Known RBP	13.94	□□□□□ -0.18
DEPDC5-222	ENST00000535622	ITPRIP	Q8IWB1	547 aa		13.93	□□□□□ -0.18
DEPDC5-222	ENST00000535622	SPRYD3	Q8NCJ5	442 aa		13.92	□□□□□ -0.18
DEPDC5-222	ENST00000535622	ZBED9	Q6R2W3	1325 aa		13.92	□□□□□ -0.18
DEPDC5-222	ENST00000535622	RUSC2	Q8N2Y8	1516 aa		13.91	□□□□□ -0.18
DEPDC5-222	ENST00000535622	USP35	Q9P2H5	1018 aa		13.91	□□□□□ -0.18
DEPDC5-222	ENST00000535622	CHMP4A	Q9BY43	222 aa		13.9	□□□□□ -0.18
DEPDC5-222	ENST00000535622	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.9	□□□□□ -0.18
DEPDC5-222	ENST00000535622	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.9	□□□□□ -0.18
DEPDC5-222	ENST00000535622	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
DEPDC5-222	ENST00000535622	GGT6	Q6P531	493 aa		13.9	□□□□□ -0.18
DEPDC5-222	ENST00000535622	LMOD2	Q6P5Q4	547 aa		13.88	□□□□□ -0.19
DEPDC5-222	ENST00000535622	SLK	Q9H2G2	1235 aa	Predicted RBP	13.88	□□□□□ -0.19
DEPDC5-222	ENST00000535622	KIAA1211	Q6ZU35	1233 aa		13.88	□□□□□ -0.19
DEPDC5-222	ENST00000535622	TERF2IP	Q9NYB0	399 aa		13.87	□□□□□ -0.19
DEPDC5-222	ENST00000535622	SMC4	Q9NTJ3	1288 aa		13.87	□□□□□ -0.19
DEPDC5-222	ENST00000535622	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.87	□□□□□ -0.19
DEPDC5-222	ENST00000535622	SYAP1	Q96A49	352 aa	Predicted RBP	13.87	□□□□□ -0.19
DEPDC5-222	ENST00000535622	STK26	Q9P289	416 aa		13.87	□□□□□ -0.19
DEPDC5-222	ENST00000535622	GOLGA6L3	A6NEY3	463 aa		13.86	□□□□□ -0.19
DEPDC5-222	ENST00000535622	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
DEPDC5-222	ENST00000535622	CCDC144A	A2RUR9	1427 aa		13.86	□□□□□ -0.19
DEPDC5-222	ENST00000535622	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.85	□□□□□ -0.19
DEPDC5-222	ENST00000535622	FANCI	Q9NVI1	1328 aa		13.85	□□□□□ -0.19
DEPDC5-222	ENST00000535622	MFAP1	P55081	439 aa	Known RBP	13.84	□□□□□ -0.19
DEPDC5-222	ENST00000535622	ST20-MTHFS	A0A0A6YYL1	179 aa		13.84	□□□□□ -0.19
DEPDC5-222	ENST00000535622	HMMR	O75330	724 aa		13.84	□□□□□ -0.19
DEPDC5-222	ENST00000535622	LMOD3	Q0VAK6	560 aa		13.84	□□□□□ -0.19
DEPDC5-222	ENST00000535622	RRP1	P56182	461 aa	Known RBP	13.83	□□□□□ -0.2
DEPDC5-222	ENST00000535622	KIAA2012	Q0VF49	1180 aa		13.83	□□□□□ -0.2
DEPDC5-222	ENST00000535622	DRC7	Q8IY82	874 aa		13.83	□□□□□ -0.2
DEPDC5-222	ENST00000535622	USP47	Q96K76	1375 aa		13.83	□□□□□ -0.2
DEPDC5-222	ENST00000535622	UACA	Q9BZF9	1416 aa		13.83	□□□□□ -0.2
DEPDC5-222	ENST00000535622	HTATSF1	O43719	755 aa	Known RBP	13.83	□□□□□ -0.2
DEPDC5-222	ENST00000535622	SPAG9	O60271	1321 aa	Known RBP	13.83	□□□□□ -0.2
DEPDC5-222	ENST00000535622	KIF3B	O15066	747 aa		13.82	□□□□□ -0.2
DEPDC5-222	ENST00000535622	LAMC3	Q9Y6N6	1575 aa		13.82	□□□□□ -0.2
DEPDC5-222	ENST00000535622	FAM161A	Q3B820	660 aa		13.82	□□□□□ -0.2
DEPDC5-222	ENST00000535622	HDAC5	Q9UQL6	1122 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms