RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 MIER1Q8N108 512 aa26.47■■□□□ 1.83
HTATSF1-204ENST00000535601 KCNH8Q96L42 1107 aa26.45■■□□□ 1.82
HTATSF1-204ENST00000535601 SHROOM2Q13796 1616 aa26.44■■□□□ 1.82
HTATSF1-204ENST00000535601 DNMT1P26358 1616 aaKnown RBP26.42■■□□□ 1.82
HTATSF1-204ENST00000535601 GCC2Q8IWJ2 1684 aa26.42■■□□□ 1.82
HTATSF1-204ENST00000535601 CDC42BPAQ5VT25 1732 aa26.41■■□□□ 1.82
HTATSF1-204ENST00000535601 ADCY10Q96PN6 1610 aa26.39■■□□□ 1.82
HTATSF1-204ENST00000535601 HNRNPMP52272 730 aaKnown RBP eCLIP26.39■■□□□ 1.82
HTATSF1-204ENST00000535601 ITSN2Q9NZM3 1697 aa26.38■■□□□ 1.81
HTATSF1-204ENST00000535601 DENND4BO75064 1496 aaPredicted RBP26.37■■□□□ 1.81
HTATSF1-204ENST00000535601 YTHDC1Q96MU7 727 aaKnown RBP26.37■■□□□ 1.81
HTATSF1-204ENST00000535601 ABCC10Q5T3U5 1492 aa26.36■■□□□ 1.81
HTATSF1-204ENST00000535601 MPHOSPH9Q99550 1183 aa26.35■■□□□ 1.81
HTATSF1-204ENST00000535601 CLASP1Q7Z460 1538 aa26.34■■□□□ 1.81
HTATSF1-204ENST00000535601 TONSLQ96HA7 1378 aa26.33■■□□□ 1.81
HTATSF1-204ENST00000535601 AKNAQ7Z591 1439 aa26.31■■□□□ 1.8
HTATSF1-204ENST00000535601 PPP1R15AO75807 674 aaPredicted RBP26.3■■□□□ 1.8
HTATSF1-204ENST00000535601 ABCC2Q92887 1545 aa26.26■■□□□ 1.79
HTATSF1-204ENST00000535601 SLC4A1APQ9BWU0 796 aaKnown RBP26.26■■□□□ 1.79
HTATSF1-204ENST00000535601 NCOA1Q15788 1441 aa26.26■■□□□ 1.79
HTATSF1-204ENST00000535601 ROCK1Q13464 1354 aa26.25■■□□□ 1.79
HTATSF1-204ENST00000535601 TTC37Q6PGP7 1564 aa26.25■■□□□ 1.79
HTATSF1-204ENST00000535601 CDC42BPBQ9Y5S2 1711 aa26.23■■□□□ 1.79
HTATSF1-204ENST00000535601 CROCC2H7BZ55 1655 aa26.2■■□□□ 1.78
HTATSF1-204ENST00000535601 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.18■■□□□ 1.78
HTATSF1-204ENST00000535601 C9orf84Q5VXU9 1444 aa26.18■■□□□ 1.78
HTATSF1-204ENST00000535601 TSPY4P0CV99 314 aa26.18■■□□□ 1.78
HTATSF1-204ENST00000535601 TSPY10P0CW01 314 aa26.18■■□□□ 1.78
HTATSF1-204ENST00000535601 ZCCHC11Q5TAX3 1644 aaKnown RBP26.17■■□□□ 1.78
HTATSF1-204ENST00000535601 SAMD9LQ8IVG5 1584 aa26.17■■□□□ 1.78
HTATSF1-204ENST00000535601 ADGBQ8N7X0 1667 aa26.17■■□□□ 1.78
HTATSF1-204ENST00000535601 ARHGAP5Q13017 1502 aa26.16■■□□□ 1.78
HTATSF1-204ENST00000535601 ANKRD30AQ9BXX3 1397 aa26.16■■□□□ 1.78
HTATSF1-204ENST00000535601 DDX10Q13206 875 aaKnown RBP26.14■■□□□ 1.77
HTATSF1-204ENST00000535601 PREX2Q70Z35 1606 aa26.13■■□□□ 1.77
HTATSF1-204ENST00000535601 TIMELESSQ9UNS1 1208 aa26.12■■□□□ 1.77
HTATSF1-204ENST00000535601 ANKRD50Q9ULJ7 1429 aa26.12■■□□□ 1.77
HTATSF1-204ENST00000535601 SYCP2Q9BX26 1530 aa26.12■■□□□ 1.77
HTATSF1-204ENST00000535601 L3MBTL2Q969R5 705 aa26.11■■□□□ 1.77
HTATSF1-204ENST00000535601 KDM5BQ9UGL1 1544 aa26.11■■□□□ 1.77
HTATSF1-204ENST00000535601 MBD5Q9P267 1494 aa26.11■■□□□ 1.77
HTATSF1-204ENST00000535601 PZPP20742 1482 aa26.1■■□□□ 1.77
HTATSF1-204ENST00000535601 PKD2Q13563 968 aa26.09■■□□□ 1.77
HTATSF1-204ENST00000535601 KIF15Q9NS87 1388 aa26.08■■□□□ 1.77
HTATSF1-204ENST00000535601 ADGRL2O95490 1459 aa26.08■■□□□ 1.77
HTATSF1-204ENST00000535601 ANKRD30BQ9BXX2 1392 aa26.07■■□□□ 1.76
HTATSF1-204ENST00000535601 OSCARQ8IYS5 282 aa26.06■■□□□ 1.76
HTATSF1-204ENST00000535601 NUP155O75694 1391 aa26.05■■□□□ 1.76
HTATSF1-204ENST00000535601 MYO5CQ9NQX4 1742 aa26.03■■□□□ 1.76
HTATSF1-204ENST00000535601 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.03■■□□□ 1.761e-7■■■■□ 20.5
HTATSF1-204ENST00000535601 CCDC141Q6ZP82 1450 aa26.02■■□□□ 1.76
HTATSF1-204ENST00000535601 SCAF1Q9H7N4 1312 aaKnown RBP26.02■■□□□ 1.76
HTATSF1-204ENST00000535601 ARHGEF12Q9NZN5 1544 aa26.01■■□□□ 1.75
HTATSF1-204ENST00000535601 ZNF326Q5BKZ1 582 aaKnown RBP25.99■■□□□ 1.75
HTATSF1-204ENST00000535601 ACIN1Q9UKV3 1341 aaKnown RBP25.99■■□□□ 1.75
HTATSF1-204ENST00000535601 UHRF1BP1LA0JNW5 1464 aa25.98■■□□□ 1.75
HTATSF1-204ENST00000535601 NBPF8Q3BBV2 869 aa25.98■■□□□ 1.75
HTATSF1-204ENST00000535601 SHANK2Q9UPX8 1470 aa25.97■■□□□ 1.75
HTATSF1-204ENST00000535601 ARHGEF5Q12774 1597 aa25.96■■□□□ 1.75
HTATSF1-204ENST00000535601 AFAP1Q8N556 730 aa25.94■■□□□ 1.74
HTATSF1-204ENST00000535601 RPRD2Q5VT52 1461 aaKnown RBP25.93■■□□□ 1.74
HTATSF1-204ENST00000535601 EFCAB2Q5VUJ9 269 aa25.92■■□□□ 1.74
HTATSF1-204ENST00000535601 PLCH2O75038 1416 aa25.92■■□□□ 1.74
HTATSF1-204ENST00000535601 HSPA5P11021 654 aaKnown RBP25.91■■□□□ 1.74
HTATSF1-204ENST00000535601 KIAA1107Q9UPP5 1409 aa25.91■■□□□ 1.74
HTATSF1-204ENST00000535601 TRAPPC8Q9Y2L5 1435 aa25.91■■□□□ 1.74
HTATSF1-204ENST00000535601 CENPBP07199 599 aaPredicted RBP25.9■■□□□ 1.74
HTATSF1-204ENST00000535601 TEX14Q8IWB6 1497 aa25.88■■□□□ 1.73
HTATSF1-204ENST00000535601 WDR7Q9Y4E6 1490 aa25.87■■□□□ 1.73
HTATSF1-204ENST00000535601 MYT1LQ9UL68 1186 aa25.86■■□□□ 1.73
HTATSF1-204ENST00000535601 PLEKHH2Q8IVE3 1493 aa25.86■■□□□ 1.73
HTATSF1-204ENST00000535601 ASXL2Q76L83 1435 aa25.85■■□□□ 1.73
HTATSF1-204ENST00000535601 KDM2AQ9Y2K7 1162 aa25.84■■□□□ 1.73
HTATSF1-204ENST00000535601 RSPH4AQ5TD94 716 aa25.83■■□□□ 1.73
HTATSF1-204ENST00000535601 ABCC1P33527 1531 aa25.79■■□□□ 1.72
HTATSF1-204ENST00000535601 NPM1P06748 294 aaKnown RBP eCLIP25.78■■□□□ 1.72
HTATSF1-204ENST00000535601 C11orf95C9JLR9 678 aaPredicted RBP25.78■■□□□ 1.72
HTATSF1-204ENST00000535601 EIF4G2P78344 907 aaKnown RBP eCLIP25.77■■□□□ 1.724e-7■□□□□ 10.8
HTATSF1-204ENST00000535601 FAM135AQ9P2D6 1515 aa25.77■■□□□ 1.72
HTATSF1-204ENST00000535601 SPAG9O60271 1321 aaKnown RBP25.77■■□□□ 1.72
HTATSF1-204ENST00000535601 GTF3C3Q9Y5Q9 886 aa25.76■■□□□ 1.71
HTATSF1-204ENST00000535601 RGL3Q3MIN7 710 aa25.76■■□□□ 1.71
HTATSF1-204ENST00000535601 FANCAO15360 1455 aa25.76■■□□□ 1.71
HTATSF1-204ENST00000535601 WASHC2AQ641Q2 1341 aa25.75■■□□□ 1.71
HTATSF1-204ENST00000535601 CYB5RLQ6IPT4 315 aa25.72■■□□□ 1.71
HTATSF1-204ENST00000535601 MAST1Q9Y2H9 1570 aa25.72■■□□□ 1.71
HTATSF1-204ENST00000535601 PELP1Q8IZL8 1130 aaKnown RBP25.71■■□□□ 1.71
HTATSF1-204ENST00000535601 DCAF11Q8TEB1 546 aa25.71■■□□□ 1.71
HTATSF1-204ENST00000535601 KDM5DQ9BY66 1539 aa25.69■■□□□ 1.7
HTATSF1-204ENST00000535601 POLR3GLQ9BT43 218 aa25.69■■□□□ 1.7
HTATSF1-204ENST00000535601 SCAPERQ9BY12 1400 aa25.68■■□□□ 1.7
HTATSF1-204ENST00000535601 CNGB1Q14028 1251 aaPredicted RBP25.68■■□□□ 1.7
HTATSF1-204ENST00000535601 PLXNC1O60486 1568 aa25.68■■□□□ 1.7
HTATSF1-204ENST00000535601 ADGRL1O94910 1474 aa25.66■■□□□ 1.7
HTATSF1-204ENST00000535601 ABCA9Q8IUA7 1624 aa25.66■■□□□ 1.7
HTATSF1-204ENST00000535601 DUOX2Q9NRD8 1548 aa25.65■■□□□ 1.7
HTATSF1-204ENST00000535601 ANP32CO43423 234 aa25.63■■□□□ 1.69
HTATSF1-204ENST00000535601 PLA2R1Q13018 1463 aa25.62■■□□□ 1.69
HTATSF1-204ENST00000535601 ZFYVE16Q7Z3T8 1539 aa25.62■■□□□ 1.69
HTATSF1-204ENST00000535601 UNC13BO14795 1591 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms