RNA–Protein interactions for RNA: ENST00000535535.5

LMO3-212, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 1,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-212ENST00000535535 PLSCR2Q9NRY7 297 aa16.56■□□□□ 0.24
LMO3-212ENST00000535535 PPP1R37O75864 691 aa16.55■□□□□ 0.24
LMO3-212ENST00000535535 DNAJC5Q9H3Z4 198 aa16.55■□□□□ 0.24
LMO3-212ENST00000535535 EMP3P54852 163 aa16.54■□□□□ 0.24
LMO3-212ENST00000535535 KIF3CO14782 793 aa16.51■□□□□ 0.23
LMO3-212ENST00000535535 NKX1-1Q15270 411 aaPredicted RBP16.5■□□□□ 0.23
LMO3-212ENST00000535535 ZNF710Q8N1W2 664 aa16.5■□□□□ 0.23
LMO3-212ENST00000535535 HOXB1P14653 301 aaPredicted RBP16.49■□□□□ 0.23
LMO3-212ENST00000535535 C2orf72A6NCS6 295 aa16.46■□□□□ 0.23
LMO3-212ENST00000535535 RIMBP2O15034 1052 aa16.46■□□□□ 0.23
LMO3-212ENST00000535535 POTEB3A0JP26 581 aa16.43■□□□□ 0.22
LMO3-212ENST00000535535 POTEBQ6S5H4 581 aa16.43■□□□□ 0.22
LMO3-212ENST00000535535 ZSWIM6Q9HCJ5 1215 aa16.43■□□□□ 0.22
LMO3-212ENST00000535535 HS3ST6Q96QI5 342 aa16.42■□□□□ 0.22
LMO3-212ENST00000535535 FAM205CA6NFA0 338 aa16.42■□□□□ 0.22
LMO3-212ENST00000535535 GPR153Q6NV75 609 aa16.38■□□□□ 0.21
LMO3-212ENST00000535535 TMC2Q8TDI7 906 aa16.36■□□□□ 0.21
LMO3-212ENST00000535535 RYDENQ9NUL5 291 aaKnown RBP16.33■□□□□ 0.2
LMO3-212ENST00000535535 DCAF8L2P0C7V8 631 aa16.32■□□□□ 0.2
LMO3-212ENST00000535535 ERBB3P21860 1342 aa16.29■□□□□ 0.2
LMO3-212ENST00000535535 ARSIQ5FYB1 569 aa16.29■□□□□ 0.2
LMO3-212ENST00000535535 KRTAP3-3Q9BYR6 98 aa16.29■□□□□ 0.2
LMO3-212ENST00000535535 KRTAP3-2Q9BYR7 98 aa16.29■□□□□ 0.2
LMO3-212ENST00000535535 GTPBP6O43824 516 aaPredicted RBP16.26■□□□□ 0.19
LMO3-212ENST00000535535 SLC34A2O95436 690 aa16.26■□□□□ 0.19
LMO3-212ENST00000535535 KHSRPQ92945 711 aaKnown RBP eCLIP16.25■□□□□ 0.19
LMO3-212ENST00000535535 VARS2Q5ST30 1063 aaKnown RBP16.24■□□□□ 0.19
LMO3-212ENST00000535535 GPHNQ9NQX3 736 aaPredicted RBP16.23■□□□□ 0.19
LMO3-212ENST00000535535 FOXK1P85037 733 aa16.21■□□□□ 0.19
LMO3-212ENST00000535535 PCDHGA4Q9Y5G9 962 aa16.19■□□□□ 0.18
LMO3-212ENST00000535535 AMER1Q5JTC6 1135 aaPredicted RBP16.18■□□□□ 0.18
LMO3-212ENST00000535535 SPNS2Q8IVW8 549 aa16.18■□□□□ 0.18
LMO3-212ENST00000535535 DSG2Q14126 1118 aa16.16■□□□□ 0.18
LMO3-212ENST00000535535 PLPP6Q8IY26 295 aa16.16■□□□□ 0.18
LMO3-212ENST00000535535 CRISPLD2Q9H0B8 497 aa16.16■□□□□ 0.18
LMO3-212ENST00000535535 ZNF316A6NFI3 1004 aaPredicted RBP16.15■□□□□ 0.18
LMO3-212ENST00000535535 NUDT7P0C024 238 aa16.15■□□□□ 0.18
LMO3-212ENST00000535535 RTN4Q9NQC3 1192 aaKnown RBP16.13■□□□□ 0.17
LMO3-212ENST00000535535 ZNF687Q8N1G0 1237 aa16.12■□□□□ 0.17
LMO3-212ENST00000535535 PTCD2Q8WV60 388 aaKnown RBP16.1■□□□□ 0.17
LMO3-212ENST00000535535 NCKAP5LQ9HCH0 1330 aa16.1■□□□□ 0.17
LMO3-212ENST00000535535 MMRN1Q13201 1228 aa16.09■□□□□ 0.17
LMO3-212ENST00000535535 LHX6Q9UPM6 363 aa16.06■□□□□ 0.16
LMO3-212ENST00000535535 KDM4FA0A1W2PPD8 638 aa16.05■□□□□ 0.16
LMO3-212ENST00000535535 PPP1R15BQ5SWA1 713 aa16.03■□□□□ 0.16
LMO3-212ENST00000535535 PDE4AP27815 886 aa16■□□□□ 0.15
LMO3-212ENST00000535535 BBXQ8WY36 941 aaPredicted RBP16■□□□□ 0.15
LMO3-212ENST00000535535 OXER1Q8TDS5 423 aa15.97■□□□□ 0.15
LMO3-212ENST00000535535 CADPS2Q86UW7 1296 aa15.96■□□□□ 0.14
LMO3-212ENST00000535535 MFSD10Q14728 455 aa15.95■□□□□ 0.14
LMO3-212ENST00000535535 TBC1D12O60347 775 aa15.93■□□□□ 0.14
LMO3-212ENST00000535535 LARP6Q9BRS8 491 aaKnown RBP15.93■□□□□ 0.14
LMO3-212ENST00000535535 POTEEQ6S8J3 1075 aa15.91■□□□□ 0.14
LMO3-212ENST00000535535 UPF1Q92900 1129 aaKnown RBP eCLIP15.91■□□□□ 0.14
LMO3-212ENST00000535535 DDX27Q96GQ7 796 aaKnown RBP15.91■□□□□ 0.14
LMO3-212ENST00000535535 PSDA5PKW4 1024 aaPredicted RBP15.91■□□□□ 0.14
LMO3-212ENST00000535535 PBX2P40425 430 aa15.91■□□□□ 0.14
LMO3-212ENST00000535535 RB1CC1Q8TDY2 1594 aa15.88■□□□□ 0.13
LMO3-212ENST00000535535 LSM11P83369 360 aaKnown RBP eCLIP15.88■□□□□ 0.13
LMO3-212ENST00000535535 AXIN2Q9Y2T1 843 aa15.84■□□□□ 0.13
LMO3-212ENST00000535535 ANKRD13DQ6ZTN6 518 aa15.81■□□□□ 0.12
LMO3-212ENST00000535535 PPP4R3BQ5MIZ7 849 aa15.79■□□□□ 0.12
LMO3-212ENST00000535535 SPRYD3Q8NCJ5 442 aa15.79■□□□□ 0.12
LMO3-212ENST00000535535 PTGER2P43116 358 aa15.78■□□□□ 0.12
LMO3-212ENST00000535535 EMILIN3Q9NT22 766 aa15.78■□□□□ 0.12
LMO3-212ENST00000535535 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.78■□□□□ 0.12
LMO3-212ENST00000535535 ARHGAP33O14559 1287 aa15.77■□□□□ 0.11
LMO3-212ENST00000535535 MYT1LQ9UL68 1186 aa15.77■□□□□ 0.11
LMO3-212ENST00000535535 RNF166Q96A37 237 aaPredicted RBP15.76■□□□□ 0.11
LMO3-212ENST00000535535 ANO8Q9HCE9 1232 aaPredicted RBP15.74■□□□□ 0.11
LMO3-212ENST00000535535 EVI5O60447 810 aa15.73■□□□□ 0.11
LMO3-212ENST00000535535 PSEN2P49810 448 aa15.71■□□□□ 0.1
LMO3-212ENST00000535535 FOSBP53539 338 aa15.71■□□□□ 0.1
LMO3-212ENST00000535535 CAMK2BQ13554 666 aa15.71■□□□□ 0.1
LMO3-212ENST00000535535 ZNF454Q8N9F8 522 aa15.71■□□□□ 0.1
LMO3-212ENST00000535535 DMRTA1Q5VZB9 504 aa15.7■□□□□ 0.1
LMO3-212ENST00000535535 NACADO15069 1562 aa15.7■□□□□ 0.1
LMO3-212ENST00000535535 MAP3K9P80192 1104 aa15.69■□□□□ 0.1
LMO3-212ENST00000535535 PAXIP1Q6ZW49 1069 aaPredicted RBP15.68■□□□□ 0.1
LMO3-212ENST00000535535 JPH4Q96JJ6 628 aa15.68■□□□□ 0.1
LMO3-212ENST00000535535 ADGRD1Q6QNK2 874 aa15.67■□□□□ 0.1
LMO3-212ENST00000535535 CFAP44Q96MT7 982 aa15.66■□□□□ 0.1
LMO3-212ENST00000535535 KCNK17Q96T54 332 aa15.65■□□□□ 0.1
LMO3-212ENST00000535535 UNC13AQ9UPW8 1703 aa15.65■□□□□ 0.1
LMO3-212ENST00000535535 BCL2L12Q9HB09 334 aa15.65■□□□□ 0.1
LMO3-212ENST00000535535 TK2O00142 265 aa15.64■□□□□ 0.09
LMO3-212ENST00000535535 HRO43593 1189 aa15.59■□□□□ 0.09
LMO3-212ENST00000535535 KCNH8Q96L42 1107 aa15.59■□□□□ 0.09
LMO3-212ENST00000535535 DPYSL4O14531 572 aa15.58■□□□□ 0.08
LMO3-212ENST00000535535 ZDHHC16Q969W1 377 aa15.58■□□□□ 0.08
LMO3-212ENST00000535535 ADAM33Q9BZ11 813 aa15.57■□□□□ 0.08
LMO3-212ENST00000535535 PCDHGA10Q9Y5H3 936 aa15.54■□□□□ 0.08
LMO3-212ENST00000535535 PTPREP23469 700 aa15.53■□□□□ 0.08
LMO3-212ENST00000535535 VPS9D1Q9Y2B5 631 aa15.52■□□□□ 0.07
LMO3-212ENST00000535535 SLC4A5Q9BY07 1137 aa15.51■□□□□ 0.07
LMO3-212ENST00000535535 PHF14O94880 888 aa15.5■□□□□ 0.07
LMO3-212ENST00000535535 ZBED2Q9BTP6 218 aa15.48■□□□□ 0.07
LMO3-212ENST00000535535 BICRAQ9NZM4 1560 aa15.46■□□□□ 0.07
LMO3-212ENST00000535535 TYW1BQ6NUM6 668 aa15.46■□□□□ 0.07
LMO3-212ENST00000535535 PDIA6Q15084 440 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms