RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 RIMBP3CA6NJZ7 1639 aa35.24■■■■□ 3.23
PTPMT1-205ENST00000534775 RIMBP3BA6NNM3 1639 aa35.24■■■■□ 3.23
PTPMT1-205ENST00000534775 RIMBP3Q9UFD9 1639 aa35.24■■■■□ 3.23
PTPMT1-205ENST00000534775 ZNF644Q9H582 1327 aaPredicted RBP35.22■■■■□ 3.23
PTPMT1-205ENST00000534775 TTC37Q6PGP7 1564 aa35.22■■■■□ 3.23
PTPMT1-205ENST00000534775 GCC2Q8IWJ2 1684 aa35.21■■■■□ 3.23
PTPMT1-205ENST00000534775 MYO5CQ9NQX4 1742 aa35.2■■■■□ 3.22
PTPMT1-205ENST00000534775 CDC42BPBQ9Y5S2 1711 aa35.2■■■■□ 3.22
PTPMT1-205ENST00000534775 ABCC5O15440 1437 aa35.19■■■■□ 3.22
PTPMT1-205ENST00000534775 NAIPQ13075 1403 aa35.19■■■■□ 3.22
PTPMT1-205ENST00000534775 ZNF777Q9ULD5 760 aaPredicted RBP35.17■■■■□ 3.22
PTPMT1-205ENST00000534775 ROCK1Q13464 1354 aa35.16■■■■□ 3.22
PTPMT1-205ENST00000534775 CROCC2H7BZ55 1655 aa35.15■■■■□ 3.22
PTPMT1-205ENST00000534775 WDR7Q9Y4E6 1490 aa35.15■■■■□ 3.22
PTPMT1-205ENST00000534775 KCNH8Q96L42 1107 aa35.11■■■■□ 3.21
PTPMT1-205ENST00000534775 CHIC2Q9UKJ5 165 aa35.11■■■■□ 3.21
PTPMT1-205ENST00000534775 ADGBQ8N7X0 1667 aa35.11■■■■□ 3.21
PTPMT1-205ENST00000534775 ARHGAP5Q13017 1502 aa35.08■■■■□ 3.21
PTPMT1-205ENST00000534775 SAMD9LQ8IVG5 1584 aa35.07■■■■□ 3.21
PTPMT1-205ENST00000534775 NPM1P06748 294 aaKnown RBP eCLIP35.07■■■■□ 3.21
PTPMT1-205ENST00000534775 ARHGEF5Q12774 1597 aa35.07■■■■□ 3.2
PTPMT1-205ENST00000534775 RRP7BPQ9NSQ0 103 aa35.05■■■■□ 3.2
PTPMT1-205ENST00000534775 SHANK2Q9UPX8 1470 aa35.04■■■■□ 3.2
PTPMT1-205ENST00000534775 ASXL2Q76L83 1435 aa35.02■■■■□ 3.2
PTPMT1-205ENST00000534775 PLCH2O75038 1416 aa35.02■■■■□ 3.2
PTPMT1-205ENST00000534775 ADGRL2O95490 1459 aa35.02■■■■□ 3.2
PTPMT1-205ENST00000534775 PLEKHH2Q8IVE3 1493 aa35.01■■■■□ 3.2
PTPMT1-205ENST00000534775 ACIN1Q9UKV3 1341 aaKnown RBP35■■■■□ 3.19
PTPMT1-205ENST00000534775 ARAP3Q8WWN8 1544 aa35■■■■□ 3.19
PTPMT1-205ENST00000534775 ABCA9Q8IUA7 1624 aa34.97■■■■□ 3.19
PTPMT1-205ENST00000534775 RSPH4AQ5TD94 716 aa34.97■■■■□ 3.19
PTPMT1-205ENST00000534775 MBD5Q9P267 1494 aa34.96■■■■□ 3.19
PTPMT1-205ENST00000534775 CYB5RLQ6IPT4 315 aa34.95■■■■□ 3.19
PTPMT1-205ENST00000534775 MAPKBP1O60336 1514 aa34.95■■■■□ 3.19
PTPMT1-205ENST00000534775 CCDC141Q6ZP82 1450 aa34.94■■■■□ 3.18
PTPMT1-205ENST00000534775 ANKRD30AQ9BXX3 1397 aa34.93■■■■□ 3.18
PTPMT1-205ENST00000534775 NCOA1Q15788 1441 aa34.93■■■■□ 3.18
PTPMT1-205ENST00000534775 KIAA1107Q9UPP5 1409 aa34.93■■■■□ 3.18
PTPMT1-205ENST00000534775 C9orf84Q5VXU9 1444 aa34.91■■■■□ 3.18
PTPMT1-205ENST00000534775 EFCAB2Q5VUJ9 269 aa34.91■■■■□ 3.18
PTPMT1-205ENST00000534775 SYCP2Q9BX26 1530 aa34.91■■■■□ 3.18
PTPMT1-205ENST00000534775 TSPY4P0CV99 314 aa34.9■■■■□ 3.18
PTPMT1-205ENST00000534775 TSPY10P0CW01 314 aa34.9■■■■□ 3.18
PTPMT1-205ENST00000534775 KDM6BO15054 1643 aa34.89■■■■□ 3.18
PTPMT1-205ENST00000534775 HNRNPMP52272 730 aaKnown RBP eCLIP34.89■■■■□ 3.18
PTPMT1-205ENST00000534775 MAST1Q9Y2H9 1570 aa34.84■■■■□ 3.17
PTPMT1-205ENST00000534775 ABCC1P33527 1531 aa34.83■■■■□ 3.17
PTPMT1-205ENST00000534775 TRIM52Q96A61 297 aa34.75■■■■□ 3.15
PTPMT1-205ENST00000534775 FANCAO15360 1455 aa34.74■■■■□ 3.15
PTPMT1-205ENST00000534775 ARHGEF12Q9NZN5 1544 aa34.73■■■■□ 3.15
PTPMT1-205ENST00000534775 ANKRD50Q9ULJ7 1429 aa34.72■■■■□ 3.15
PTPMT1-205ENST00000534775 PLXNC1O60486 1568 aa34.7■■■■□ 3.15
PTPMT1-205ENST00000534775 KIF15Q9NS87 1388 aa34.7■■■■□ 3.14
PTPMT1-205ENST00000534775 CFAP74Q9C0B2 1584 aa34.67■■■■□ 3.14
PTPMT1-205ENST00000534775 CD109Q6YHK3 1445 aa34.63■■■■□ 3.13
PTPMT1-205ENST00000534775 MPHOSPH9Q99550 1183 aa34.62■■■■□ 3.13
PTPMT1-205ENST00000534775 TRAPPC8Q9Y2L5 1435 aa34.61■■■■□ 3.13
PTPMT1-205ENST00000534775 ADGRL1O94910 1474 aa34.6■■■■□ 3.13
PTPMT1-205ENST00000534775 TIMELESSQ9UNS1 1208 aa34.59■■■■□ 3.13
PTPMT1-205ENST00000534775 DENND4BO75064 1496 aaPredicted RBP34.58■■■■□ 3.13
PTPMT1-205ENST00000534775 RTEL1-TNFRSF6BF6WH68 1400 aa34.56■■■■□ 3.12
PTPMT1-205ENST00000534775 SIN3AQ96ST3 1273 aa34.55■■■■□ 3.12
PTPMT1-205ENST00000534775 DUOX2Q9NRD8 1548 aa34.54■■■■□ 3.12
PTPMT1-205ENST00000534775 GLI2P10070 1586 aa34.54■■■■□ 3.12
PTPMT1-205ENST00000534775 PZPP20742 1482 aa34.53■■■■□ 3.12
PTPMT1-205ENST00000534775 SCAPERQ9BY12 1400 aa34.53■■■■□ 3.12
PTPMT1-205ENST00000534775 KDM5DQ9BY66 1539 aa34.52■■■■□ 3.12
PTPMT1-205ENST00000534775 NEUROD1Q13562 356 aa34.52■■■■□ 3.12
PTPMT1-205ENST00000534775 SPAG9O60271 1321 aaKnown RBP34.51■■■■□ 3.12
PTPMT1-205ENST00000534775 SLC4A1APQ9BWU0 796 aaKnown RBP34.5■■■■□ 3.11
PTPMT1-205ENST00000534775 MAP3K4Q9Y6R4 1608 aa34.5■■■■□ 3.11
PTPMT1-205ENST00000534775 ZFYVE16Q7Z3T8 1539 aa34.5■■■■□ 3.11
PTPMT1-205ENST00000534775 INO80Q9ULG1 1556 aaPredicted RBP34.47■■■■□ 3.11
PTPMT1-205ENST00000534775 ERBINQ96RT1 1412 aa34.46■■■■□ 3.11
PTPMT1-205ENST00000534775 NEO1Q92859 1461 aa34.46■■■■□ 3.11
PTPMT1-205ENST00000534775 AFAP1Q8N556 730 aa34.45■■■■□ 3.11
PTPMT1-205ENST00000534775 ATP7AQ04656 1500 aa34.44■■■■□ 3.1
PTPMT1-205ENST00000534775 UNC13BO14795 1591 aa34.43■■■■□ 3.1
PTPMT1-205ENST00000534775 NUP155O75694 1391 aa34.43■■■■□ 3.1
PTPMT1-205ENST00000534775 DIP2BQ9P265 1576 aa34.43■■■■□ 3.1
PTPMT1-205ENST00000534775 DNAJC5Q9H3Z4 198 aa34.42■■■■□ 3.1
PTPMT1-205ENST00000534775 ZNF518AQ6AHZ1 1483 aa34.42■■■■□ 3.1
PTPMT1-205ENST00000534775 TONSLQ96HA7 1378 aa34.4■■■■□ 3.1
PTPMT1-205ENST00000534775 ANKRD30BQ9BXX2 1392 aa34.37■■■■□ 3.09
PTPMT1-205ENST00000534775 POGZQ7Z3K3 1410 aa34.35■■■■□ 3.09
PTPMT1-205ENST00000534775 KDM5CP41229 1560 aa34.33■■■■□ 3.09
PTPMT1-205ENST00000534775 ZNF316A6NFI3 1004 aaPredicted RBP34.32■■■■□ 3.08
PTPMT1-205ENST00000534775 FAM135AQ9P2D6 1515 aa34.31■■■■□ 3.08
PTPMT1-205ENST00000534775 FOXD1Q16676 465 aa34.31■■■■□ 3.08
PTPMT1-205ENST00000534775 MAGI2Q86UL8 1455 aa34.3■■■■□ 3.08
PTPMT1-205ENST00000534775 IQGAP3Q86VI3 1631 aa34.3■■■■□ 3.08
PTPMT1-205ENST00000534775 PKD2Q13563 968 aa34.3■■■■□ 3.08
PTPMT1-205ENST00000534775 KIDINS220Q9ULH0 1771 aa34.29■■■■□ 3.08
PTPMT1-205ENST00000534775 FAM69CQ0P6D2 419 aa34.28■■■■□ 3.08
PTPMT1-205ENST00000534775 KIF13AQ9H1H9 1805 aa34.28■■■■□ 3.08
PTPMT1-205ENST00000534775 MYT1LQ9UL68 1186 aa34.27■■■■□ 3.08
PTPMT1-205ENST00000534775 RPRD2Q5VT52 1461 aaKnown RBP34.26■■■■□ 3.08
PTPMT1-205ENST00000534775 EIF2AK4Q9P2K8 1649 aaKnown RBP34.25■■■■□ 3.07
PTPMT1-205ENST00000534775 PPP1R15AO75807 674 aaPredicted RBP34.25■■■■□ 3.07
PTPMT1-205ENST00000534775 HECW2Q9P2P5 1572 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms