RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 PLCH2O75038 1416 aa26.56■■□□□ 1.84
RPS3-220ENST00000534555 EHMT2Q96KQ7 1210 aa26.54■■□□□ 1.84
RPS3-220ENST00000534555 ATP1B4Q9UN42 357 aaPredicted RBP26.54■■□□□ 1.84
RPS3-220ENST00000534555 FER1L4A9Z1Z3 1794 aa26.53■■□□□ 1.84
RPS3-220ENST00000534555 CERKQ8TCT0 537 aa26.51■■□□□ 1.83
RPS3-220ENST00000534555 ATP10AO60312 1499 aa26.49■■□□□ 1.83
RPS3-220ENST00000534555 CEBPAP49715 358 aaPredicted RBP26.48■■□□□ 1.83
RPS3-220ENST00000534555 EFCAB2Q5VUJ9 269 aa26.47■■□□□ 1.83
RPS3-220ENST00000534555 ARHGEF12Q9NZN5 1544 aa26.46■■□□□ 1.83
RPS3-220ENST00000534555 C9orf84Q5VXU9 1444 aa26.45■■□□□ 1.82
RPS3-220ENST00000534555 MYO5CQ9NQX4 1742 aa26.43■■□□□ 1.82
RPS3-220ENST00000534555 UBTFP17480 764 aaKnown RBP26.43■■□□□ 1.82
RPS3-220ENST00000534555 KIF14Q15058 1648 aa26.41■■□□□ 1.82
RPS3-220ENST00000534555 AFAP1Q8N556 730 aa26.4■■□□□ 1.82
RPS3-220ENST00000534555 FMN1Q68DA7 1419 aa26.39■■□□□ 1.82
RPS3-220ENST00000534555 ARHGAP35Q9NRY4 1499 aa26.38■■□□□ 1.81
RPS3-220ENST00000534555 CDK11AQ9UQ88 783 aaPredicted RBP26.38■■□□□ 1.81
RPS3-220ENST00000534555 PREX1Q8TCU6 1659 aa26.38■■□□□ 1.81
RPS3-220ENST00000534555 MYT1LQ9UL68 1186 aa26.37■■□□□ 1.81
RPS3-220ENST00000534555 ZNF518AQ6AHZ1 1483 aa26.35■■□□□ 1.81
RPS3-220ENST00000534555 ARHGAP5Q13017 1502 aa26.34■■□□□ 1.81
RPS3-220ENST00000534555 TROQ12816 1431 aaPredicted RBP26.33■■□□□ 1.81
RPS3-220ENST00000534555 STRCQ7RTU9 1775 aa26.3■■□□□ 1.8
RPS3-220ENST00000534555 KDM5CP41229 1560 aa26.3■■□□□ 1.8
RPS3-220ENST00000534555 LRRIQ1Q96JM4 1722 aa26.28■■□□□ 1.8
RPS3-220ENST00000534555 DIP2CQ9Y2E4 1556 aa26.28■■□□□ 1.8
RPS3-220ENST00000534555 UHRF1BP1Q6BDS2 1440 aa26.27■■□□□ 1.8
RPS3-220ENST00000534555 CLIP1P30622 1438 aa26.26■■□□□ 1.79
RPS3-220ENST00000534555 DMRT2Q9Y5R5 561 aa26.26■■□□□ 1.79
RPS3-220ENST00000534555 CDC42BPBQ9Y5S2 1711 aa26.24■■□□□ 1.79
RPS3-220ENST00000534555 ABCA6Q8N139 1617 aa26.23■■□□□ 1.79
RPS3-220ENST00000534555 SETD1BQ9UPS6 1966 aaKnown RBP26.22■■□□□ 1.79
RPS3-220ENST00000534555 TRAPPC8Q9Y2L5 1435 aa26.22■■□□□ 1.79
RPS3-220ENST00000534555 MLH3Q9UHC1 1453 aa26.21■■□□□ 1.79
RPS3-220ENST00000534555 REREQ9P2R6 1566 aa26.2■■□□□ 1.79
RPS3-220ENST00000534555 C3P01024 1663 aa26.2■■□□□ 1.78
RPS3-220ENST00000534555 ILDR2Q71H61 639 aa26.17■■□□□ 1.78
RPS3-220ENST00000534555 ESF1Q9H501 851 aaKnown RBP26.17■■□□□ 1.78
RPS3-220ENST00000534555 DISP3Q9P2K9 1392 aa26.17■■□□□ 1.78
RPS3-220ENST00000534555 ABCC1P33527 1531 aa26.15■■□□□ 1.78
RPS3-220ENST00000534555 AGLP35573 1532 aa26.14■■□□□ 1.78
RPS3-220ENST00000534555 PREX2Q70Z35 1606 aa26.14■■□□□ 1.78
RPS3-220ENST00000534555 PTPRTO14522 1441 aa26.14■■□□□ 1.77
RPS3-220ENST00000534555 ITSN2Q9NZM3 1697 aa26.13■■□□□ 1.77
RPS3-220ENST00000534555 CHIC1Q5VXU3 224 aa26.11■■□□□ 1.77
RPS3-220ENST00000534555 KIDINS220Q9ULH0 1771 aa26.1■■□□□ 1.77
RPS3-220ENST00000534555 CASKIN1Q8WXD9 1431 aa26.08■■□□□ 1.77
RPS3-220ENST00000534555 ZNF777Q9ULD5 760 aaPredicted RBP26.07■■□□□ 1.76
RPS3-220ENST00000534555 CCDC18Q5T9S5 1454 aa26.06■■□□□ 1.76
RPS3-220ENST00000534555 CDC42BPAQ5VT25 1732 aa26.06■■□□□ 1.76
RPS3-220ENST00000534555 LTBP4Q8N2S1 1624 aa26.06■■□□□ 1.76
RPS3-220ENST00000534555 NCOA1Q15788 1441 aa26.04■■□□□ 1.76
RPS3-220ENST00000534555 CNTLNQ9NXG0 1405 aa26.04■■□□□ 1.76
RPS3-220ENST00000534555 SAMD9LQ8IVG5 1584 aa26.02■■□□□ 1.76
RPS3-220ENST00000534555 HNRNPMP52272 730 aaKnown RBP eCLIP26.01■■□□□ 1.752e-6■□□□□ 10.1
RPS3-220ENST00000534555 SOCS7O14512 581 aa26■■□□□ 1.75
RPS3-220ENST00000534555 ZMYM3Q14202 1370 aa25.98■■□□□ 1.75
RPS3-220ENST00000534555 SPAG9O60271 1321 aaKnown RBP25.98■■□□□ 1.75
RPS3-220ENST00000534555 CAMSAP1Q5T5Y3 1602 aa25.98■■□□□ 1.75
RPS3-220ENST00000534555 SYCP2Q9BX26 1530 aa25.97■■□□□ 1.75
RPS3-220ENST00000534555 SUPT6HQ7KZ85 1726 aaKnown RBP25.97■■□□□ 1.75
RPS3-220ENST00000534555 NCKAP5LQ9HCH0 1330 aa25.96■■□□□ 1.75
RPS3-220ENST00000534555 GPATCH8Q9UKJ3 1502 aaKnown RBP25.96■■□□□ 1.75
RPS3-220ENST00000534555 NPATQ14207 1427 aa25.95■■□□□ 1.74
RPS3-220ENST00000534555 SPATA31D1Q6ZQQ2 1576 aa25.94■■□□□ 1.74
RPS3-220ENST00000534555 MROH2AA6NES4 1674 aa25.93■■□□□ 1.74
RPS3-220ENST00000534555 FYCO1Q9BQS8 1478 aa25.92■■□□□ 1.74
RPS3-220ENST00000534555 IQSEC2Q5JU85 1478 aa25.91■■□□□ 1.74
RPS3-220ENST00000534555 ZNF335Q9H4Z2 1342 aaPredicted RBP25.9■■□□□ 1.74
RPS3-220ENST00000534555 CLTCQ00610 1675 aaKnown RBP25.9■■□□□ 1.74
RPS3-220ENST00000534555 ATP7AQ04656 1500 aa25.88■■□□□ 1.73
RPS3-220ENST00000534555 GGT6Q6P531 493 aa25.88■■□□□ 1.73
RPS3-220ENST00000534555 CFDP1Q9UEE9 299 aaPredicted RBP25.88■■□□□ 1.73
RPS3-220ENST00000534555 A2MP01023 1474 aa25.86■■□□□ 1.73
RPS3-220ENST00000534555 KIAA1107Q9UPP5 1409 aa25.85■■□□□ 1.73
RPS3-220ENST00000534555 PLXNC1O60486 1568 aa25.84■■□□□ 1.73
RPS3-220ENST00000534555 INO80Q9ULG1 1556 aaPredicted RBP25.84■■□□□ 1.73
RPS3-220ENST00000534555 PTPRKQ15262 1439 aa25.83■■□□□ 1.73
RPS3-220ENST00000534555 MYO3AQ8NEV4 1616 aa25.83■■□□□ 1.73
RPS3-220ENST00000534555 CCNB3Q8WWL7 1395 aa25.82■■□□□ 1.72
RPS3-220ENST00000534555 UBAP1LF5GYI3 381 aa25.82■■□□□ 1.72
RPS3-220ENST00000534555 PKD2Q13563 968 aa25.82■■□□□ 1.72
RPS3-220ENST00000534555 PLEKHH2Q8IVE3 1493 aa25.8■■□□□ 1.72
RPS3-220ENST00000534555 CEP170BQ9Y4F5 1589 aaPredicted RBP25.8■■□□□ 1.72
RPS3-220ENST00000534555 ZNF142P52746 1687 aaPredicted RBP25.8■■□□□ 1.72
RPS3-220ENST00000534555 ZNF644Q9H582 1327 aaPredicted RBP25.79■■□□□ 1.72
RPS3-220ENST00000534555 PLA2R1Q13018 1463 aa25.79■■□□□ 1.72
RPS3-220ENST00000534555 TCOF1Q13428 1488 aaKnown RBP25.78■■□□□ 1.72
RPS3-220ENST00000534555 MTUS2Q5JR59 1369 aa25.75■■□□□ 1.71
RPS3-220ENST00000534555 PPP6R1Q9UPN7 881 aa25.74■■□□□ 1.71
RPS3-220ENST00000534555 ADGBQ8N7X0 1667 aa25.72■■□□□ 1.71
RPS3-220ENST00000534555 MBD5Q9P267 1494 aa25.7■■□□□ 1.7
RPS3-220ENST00000534555 TIAM1Q13009 1591 aa25.69■■□□□ 1.7
RPS3-220ENST00000534555 A2ML1A8K2U0 1454 aa25.68■■□□□ 1.7
RPS3-220ENST00000534555 DNMT1P26358 1616 aaKnown RBP25.68■■□□□ 1.7
RPS3-220ENST00000534555 FBXO31Q5XUX0 539 aaPredicted RBP25.67■■□□□ 1.7
RPS3-220ENST00000534555 DHX29Q7Z478 1369 aaKnown RBP25.66■■□□□ 1.7
RPS3-220ENST00000534555 RTEL1-TNFRSF6BF6WH68 1400 aa25.63■■□□□ 1.69
RPS3-220ENST00000534555 KIF3BO15066 747 aa25.63■■□□□ 1.69
RPS3-220ENST00000534555 SCAF1Q9H7N4 1312 aaKnown RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms