RNA–Protein interactions for RNA: ENST00000534254.5

CHID1-224, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 1,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-224ENST00000534254 FER1L4A9Z1Z3 1794 aa22.48■■□□□ 1.19
CHID1-224ENST00000534254 PCF11O94913 1555 aaKnown RBP22.45■■□□□ 1.18
CHID1-224ENST00000534254 FMN1Q68DA7 1419 aa22.44■■□□□ 1.18
CHID1-224ENST00000534254 SCAPERQ9BY12 1400 aa22.44■■□□□ 1.18
CHID1-224ENST00000534254 MLECQ14165 292 aa22.43■■□□□ 1.18
CHID1-224ENST00000534254 PLCH2O75038 1416 aa22.42■■□□□ 1.18
CHID1-224ENST00000534254 LMTK3Q96Q04 1460 aa22.41■■□□□ 1.18
CHID1-224ENST00000534254 POGZQ7Z3K3 1410 aa22.41■■□□□ 1.18
CHID1-224ENST00000534254 CDC42BPBQ9Y5S2 1711 aa22.41■■□□□ 1.18
CHID1-224ENST00000534254 ARHGAP5Q13017 1502 aa22.37■■□□□ 1.17
CHID1-224ENST00000534254 HSPA2P54652 639 aa22.36■■□□□ 1.17
CHID1-224ENST00000534254 TROQ12816 1431 aaPredicted RBP22.36■■□□□ 1.17
CHID1-224ENST00000534254 MAGI2Q86UL8 1455 aa22.34■■□□□ 1.17
CHID1-224ENST00000534254 EFCAB2Q5VUJ9 269 aa22.32■■□□□ 1.16
CHID1-224ENST00000534254 PREX2Q70Z35 1606 aa22.31■■□□□ 1.16
CHID1-224ENST00000534254 CDC42BPAQ5VT25 1732 aa22.31■■□□□ 1.16
CHID1-224ENST00000534254 ATP10AO60312 1499 aa22.29■■□□□ 1.16
CHID1-224ENST00000534254 CDK11AQ9UQ88 783 aaPredicted RBP22.29■■□□□ 1.16
CHID1-224ENST00000534254 CLIP1P30622 1438 aa22.29■■□□□ 1.16
CHID1-224ENST00000534254 ITSN2Q9NZM3 1697 aa22.29■■□□□ 1.16
CHID1-224ENST00000534254 ABCA6Q8N139 1617 aa22.28■■□□□ 1.16
CHID1-224ENST00000534254 C9orf84Q5VXU9 1444 aa22.28■■□□□ 1.16
CHID1-224ENST00000534254 KDM5CP41229 1560 aa22.28■■□□□ 1.16
CHID1-224ENST00000534254 ARHGEF12Q9NZN5 1544 aa22.27■■□□□ 1.16
CHID1-224ENST00000534254 AFAP1Q8N556 730 aa22.27■■□□□ 1.16
CHID1-224ENST00000534254 DIP2CQ9Y2E4 1556 aa22.27■■□□□ 1.16
CHID1-224ENST00000534254 MYT1LQ9UL68 1186 aa22.26■■□□□ 1.15
CHID1-224ENST00000534254 ZNF518AQ6AHZ1 1483 aa22.25■■□□□ 1.15
CHID1-224ENST00000534254 CEBPAP49715 358 aaPredicted RBP22.24■■□□□ 1.15
CHID1-224ENST00000534254 PREX1Q8TCU6 1659 aa22.23■■□□□ 1.15
CHID1-224ENST00000534254 CASKIN1Q8WXD9 1431 aa22.23■■□□□ 1.15
CHID1-224ENST00000534254 ABCC1P33527 1531 aa22.22■■□□□ 1.15
CHID1-224ENST00000534254 TRAPPC8Q9Y2L5 1435 aa22.21■■□□□ 1.15
CHID1-224ENST00000534254 CCDC18Q5T9S5 1454 aa22.21■■□□□ 1.15
CHID1-224ENST00000534254 KIDINS220Q9ULH0 1771 aa22.2■■□□□ 1.14
CHID1-224ENST00000534254 FBXO41Q8TF61 875 aa22.2■■□□□ 1.14
CHID1-224ENST00000534254 C3P01024 1663 aa22.18■■□□□ 1.14
CHID1-224ENST00000534254 FYCO1Q9BQS8 1478 aa22.16■■□□□ 1.14
CHID1-224ENST00000534254 SETD1BQ9UPS6 1966 aaKnown RBP22.16■■□□□ 1.14
CHID1-224ENST00000534254 SAMD9LQ8IVG5 1584 aa22.15■■□□□ 1.14
CHID1-224ENST00000534254 STRCQ7RTU9 1775 aa22.15■■□□□ 1.14
CHID1-224ENST00000534254 REREQ9P2R6 1566 aa22.12■■□□□ 1.13
CHID1-224ENST00000534254 SUPT6HQ7KZ85 1726 aaKnown RBP22.12■■□□□ 1.13
CHID1-224ENST00000534254 ZNF777Q9ULD5 760 aaPredicted RBP22.12■■□□□ 1.13
CHID1-224ENST00000534254 SYCP2Q9BX26 1530 aa22.11■■□□□ 1.13
CHID1-224ENST00000534254 MLH3Q9UHC1 1453 aa22.11■■□□□ 1.13
CHID1-224ENST00000534254 GPATCH8Q9UKJ3 1502 aaKnown RBP22.06■■□□□ 1.12
CHID1-224ENST00000534254 AGLP35573 1532 aa22.05■■□□□ 1.12
CHID1-224ENST00000534254 UHRF1BP1Q6BDS2 1440 aa22.03■■□□□ 1.12
CHID1-224ENST00000534254 HNRNPMP52272 730 aaKnown RBP eCLIP22.02■■□□□ 1.122e-7■■■■□ 25.4
CHID1-224ENST00000534254 CLTCQ00610 1675 aaKnown RBP22.01■■□□□ 1.11
CHID1-224ENST00000534254 ATP7AQ04656 1500 aa22■■□□□ 1.11
CHID1-224ENST00000534254 INO80Q9ULG1 1556 aaPredicted RBP21.99■■□□□ 1.11
CHID1-224ENST00000534254 CERKQ8TCT0 537 aa21.99■■□□□ 1.11
CHID1-224ENST00000534254 TIAM1Q13009 1591 aa21.98■■□□□ 1.11
CHID1-224ENST00000534254 ESF1Q9H501 851 aaKnown RBP21.97■■□□□ 1.11
CHID1-224ENST00000534254 MROH2AA6NES4 1674 aa21.96■■□□□ 1.11
CHID1-224ENST00000534254 SPAG9O60271 1321 aaKnown RBP21.96■■□□□ 1.11
CHID1-224ENST00000534254 MTUS2Q5JR59 1369 aa21.96■■□□□ 1.11
CHID1-224ENST00000534254 CCNB3Q8WWL7 1395 aa21.95■■□□□ 1.1
CHID1-224ENST00000534254 ZNF644Q9H582 1327 aaPredicted RBP21.93■■□□□ 1.1
CHID1-224ENST00000534254 CFDP1Q9UEE9 299 aaPredicted RBP21.93■■□□□ 1.1
CHID1-224ENST00000534254 PLXNC1O60486 1568 aa21.92■■□□□ 1.1
CHID1-224ENST00000534254 EHBP1L1Q8N3D4 1523 aa21.91■■□□□ 1.1
CHID1-224ENST00000534254 ADGBQ8N7X0 1667 aa21.91■■□□□ 1.1
CHID1-224ENST00000534254 CEP162Q5TB80 1403 aa21.89■■□□□ 1.1
CHID1-224ENST00000534254 A2MP01023 1474 aa21.89■■□□□ 1.09
CHID1-224ENST00000534254 PLEKHH2Q8IVE3 1493 aa21.88■■□□□ 1.09
CHID1-224ENST00000534254 CNTLNQ9NXG0 1405 aa21.88■■□□□ 1.09
CHID1-224ENST00000534254 KIAA1107Q9UPP5 1409 aa21.87■■□□□ 1.09
CHID1-224ENST00000534254 CAMSAP1Q5T5Y3 1602 aa21.87■■□□□ 1.09
CHID1-224ENST00000534254 MYO3AQ8NEV4 1616 aa21.87■■□□□ 1.09
CHID1-224ENST00000534254 GGT6Q6P531 493 aa21.84■■□□□ 1.09
CHID1-224ENST00000534254 ZMYM3Q14202 1370 aa21.84■■□□□ 1.09
CHID1-224ENST00000534254 NCOA1Q15788 1441 aa21.83■■□□□ 1.09
CHID1-224ENST00000534254 ZNF142P52746 1687 aaPredicted RBP21.83■■□□□ 1.09
CHID1-224ENST00000534254 DMRT2Q9Y5R5 561 aa21.81■■□□□ 1.08
CHID1-224ENST00000534254 MBD5Q9P267 1494 aa21.81■■□□□ 1.08
CHID1-224ENST00000534254 PTPRTO14522 1441 aa21.8■■□□□ 1.08
CHID1-224ENST00000534254 LTBP4Q8N2S1 1624 aa21.8■■□□□ 1.08
CHID1-224ENST00000534254 NPATQ14207 1427 aa21.79■■□□□ 1.08
CHID1-224ENST00000534254 NCOA2Q15596 1464 aa21.78■■□□□ 1.08
CHID1-224ENST00000534254 CEP170BQ9Y4F5 1589 aaPredicted RBP21.78■■□□□ 1.08
CHID1-224ENST00000534254 CAMSAP2Q08AD1 1489 aa21.77■■□□□ 1.08
CHID1-224ENST00000534254 NCKAP5LQ9HCH0 1330 aa21.77■■□□□ 1.07
CHID1-224ENST00000534254 PTPRKQ15262 1439 aa21.76■■□□□ 1.07
CHID1-224ENST00000534254 CFAP65Q6ZU64 1925 aaKnown RBP21.74■■□□□ 1.07
CHID1-224ENST00000534254 LOC105371045A0A1W2PR82 267 aa21.72■■□□□ 1.07
CHID1-224ENST00000534254 CCDC141Q6ZP82 1450 aa21.71■■□□□ 1.07
CHID1-224ENST00000534254 POLR1AO95602 1720 aaPredicted RBP21.69■■□□□ 1.06
CHID1-224ENST00000534254 ZNF335Q9H4Z2 1342 aaPredicted RBP21.69■■□□□ 1.06
CHID1-224ENST00000534254 DNMT1P26358 1616 aaKnown RBP21.69■■□□□ 1.06
CHID1-224ENST00000534254 KIF3BO15066 747 aa21.68■■□□□ 1.06
CHID1-224ENST00000534254 RTEL1-TNFRSF6BF6WH68 1400 aa21.68■■□□□ 1.06
CHID1-224ENST00000534254 DHX29Q7Z478 1369 aaKnown RBP21.67■■□□□ 1.06
CHID1-224ENST00000534254 FBXO31Q5XUX0 539 aaPredicted RBP21.66■■□□□ 1.06
CHID1-224ENST00000534254 ARHGEF5Q12774 1597 aa21.65■■□□□ 1.06
CHID1-224ENST00000534254 TCOF1Q13428 1488 aaKnown RBP21.64■■□□□ 1.06
CHID1-224ENST00000534254 KDM5DQ9BY66 1539 aa21.64■■□□□ 1.05
CHID1-224ENST00000534254 PLA2R1Q13018 1463 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms