RNA–Protein interactions for RNA: ENST00000533865.5

CTSC-207, Transcript of cathepsin C, humanhuman

TSL 4

Gene CTSC, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-207ENST00000533865 LTBP4Q8N2S1 1624 aa17.97■□□□□ 0.47
CTSC-207ENST00000533865 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.96■□□□□ 0.47
CTSC-207ENST00000533865 MLECQ14165 292 aa17.95■□□□□ 0.46
CTSC-207ENST00000533865 DMRT2Q9Y5R5 561 aa17.95■□□□□ 0.46
CTSC-207ENST00000533865 PTPRTO14522 1441 aa17.92■□□□□ 0.46
CTSC-207ENST00000533865 IQSEC2Q5JU85 1478 aa17.92■□□□□ 0.46
CTSC-207ENST00000533865 CEBPAP49715 358 aaPredicted RBP17.91■□□□□ 0.46
CTSC-207ENST00000533865 FAM9AQ8IZU1 332 aaPredicted RBP17.9■□□□□ 0.46
CTSC-207ENST00000533865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.89■□□□□ 0.45
CTSC-207ENST00000533865 HNRNPUL2Q1KMD3 747 aaKnown RBP17.89■□□□□ 0.45
CTSC-207ENST00000533865 UHRF1BP1Q6BDS2 1440 aa17.89■□□□□ 0.45
CTSC-207ENST00000533865 ATP10AO60312 1499 aa17.88■□□□□ 0.45
CTSC-207ENST00000533865 C9orf84Q5VXU9 1444 aa17.86■□□□□ 0.45
CTSC-207ENST00000533865 C3P01024 1663 aa17.86■□□□□ 0.45
CTSC-207ENST00000533865 SCAPERQ9BY12 1400 aa17.85■□□□□ 0.45
CTSC-207ENST00000533865 PLEKHD1A6NEE1 506 aa17.84■□□□□ 0.45
CTSC-207ENST00000533865 PLCH2O75038 1416 aa17.8■□□□□ 0.44
CTSC-207ENST00000533865 EEA1Q15075 1411 aa17.8■□□□□ 0.44
CTSC-207ENST00000533865 NCOA1Q15788 1441 aa17.78■□□□□ 0.44
CTSC-207ENST00000533865 KDM5CP41229 1560 aa17.77■□□□□ 0.44
CTSC-207ENST00000533865 REREQ9P2R6 1566 aa17.77■□□□□ 0.44
CTSC-207ENST00000533865 MYO5CQ9NQX4 1742 aa17.76■□□□□ 0.43
CTSC-207ENST00000533865 DIP2CQ9Y2E4 1556 aa17.75■□□□□ 0.43
CTSC-207ENST00000533865 CDK13Q14004 1512 aaKnown RBP17.73■□□□□ 0.43
CTSC-207ENST00000533865 ABCA6Q8N139 1617 aa17.72■□□□□ 0.43
CTSC-207ENST00000533865 TRAPPC8Q9Y2L5 1435 aa17.72■□□□□ 0.43
CTSC-207ENST00000533865 ZNF518AQ6AHZ1 1483 aa17.71■□□□□ 0.43
CTSC-207ENST00000533865 MED1Q15648 1581 aaPredicted RBP17.7■□□□□ 0.42
CTSC-207ENST00000533865 CAMSAP1Q5T5Y3 1602 aa17.69■□□□□ 0.42
CTSC-207ENST00000533865 AGLP35573 1532 aa17.69■□□□□ 0.42
CTSC-207ENST00000533865 UBAP1LF5GYI3 381 aa17.67■□□□□ 0.42
CTSC-207ENST00000533865 EFCAB2Q5VUJ9 269 aa17.67■□□□□ 0.42
CTSC-207ENST00000533865 KIF14Q15058 1648 aa17.66■□□□□ 0.42
CTSC-207ENST00000533865 AFAP1Q8N556 730 aa17.66■□□□□ 0.42
CTSC-207ENST00000533865 ZNF335Q9H4Z2 1342 aaPredicted RBP17.66■□□□□ 0.42
CTSC-207ENST00000533865 MROH2AA6NES4 1674 aa17.64■□□□□ 0.42
CTSC-207ENST00000533865 MLH3Q9UHC1 1453 aa17.64■□□□□ 0.41
CTSC-207ENST00000533865 CDC42BPBQ9Y5S2 1711 aa17.62■□□□□ 0.41
CTSC-207ENST00000533865 NPATQ14207 1427 aa17.62■□□□□ 0.41
CTSC-207ENST00000533865 ZNF142P52746 1687 aaPredicted RBP17.61■□□□□ 0.41
CTSC-207ENST00000533865 CSRNP3Q8WYN3 585 aa17.61■□□□□ 0.41
CTSC-207ENST00000533865 KIDINS220Q9ULH0 1771 aa17.61■□□□□ 0.41
CTSC-207ENST00000533865 RANGAP1P46060 587 aaPredicted RBP17.6■□□□□ 0.41
CTSC-207ENST00000533865 CNTLNQ9NXG0 1405 aa17.6■□□□□ 0.41
CTSC-207ENST00000533865 ARHGAP5Q13017 1502 aa17.59■□□□□ 0.41
CTSC-207ENST00000533865 NCKAP5LQ9HCH0 1330 aa17.59■□□□□ 0.41
CTSC-207ENST00000533865 SUPT6HQ7KZ85 1726 aaKnown RBP17.58■□□□□ 0.41
CTSC-207ENST00000533865 TCOF1Q13428 1488 aaKnown RBP17.58■□□□□ 0.41
CTSC-207ENST00000533865 PLA2R1Q13018 1463 aa17.57■□□□□ 0.4
CTSC-207ENST00000533865 HSPA1LP34931 641 aa17.57■□□□□ 0.4
CTSC-207ENST00000533865 MYO3AQ8NEV4 1616 aa17.57■□□□□ 0.4
CTSC-207ENST00000533865 ITSN2Q9NZM3 1697 aa17.56■□□□□ 0.4
CTSC-207ENST00000533865 ABCC1P33527 1531 aa17.55■□□□□ 0.4
CTSC-207ENST00000533865 LRRIQ1Q96JM4 1722 aa17.55■□□□□ 0.4
CTSC-207ENST00000533865 CEP170BQ9Y4F5 1589 aaPredicted RBP17.53■□□□□ 0.4
CTSC-207ENST00000533865 ESF1Q9H501 851 aaKnown RBP17.53■□□□□ 0.4
CTSC-207ENST00000533865 PREX2Q70Z35 1606 aa17.52■□□□□ 0.4
CTSC-207ENST00000533865 TROQ12816 1431 aaPredicted RBP17.52■□□□□ 0.4
CTSC-207ENST00000533865 ZMYM3Q14202 1370 aa17.52■□□□□ 0.39
CTSC-207ENST00000533865 PKD2Q13563 968 aa17.51■□□□□ 0.39
CTSC-207ENST00000533865 CLTCQ00610 1675 aaKnown RBP17.51■□□□□ 0.39
CTSC-207ENST00000533865 MYT1LQ9UL68 1186 aa17.5■□□□□ 0.39
CTSC-207ENST00000533865 ALKQ9UM73 1620 aa17.5■□□□□ 0.39
CTSC-207ENST00000533865 PTPRKQ15262 1439 aa17.47■□□□□ 0.39
CTSC-207ENST00000533865 POLR1AO95602 1720 aaPredicted RBP17.46■□□□□ 0.39
CTSC-207ENST00000533865 CDC42BPAQ5VT25 1732 aa17.45■□□□□ 0.38
CTSC-207ENST00000533865 PPP6R1Q9UPN7 881 aa17.45■□□□□ 0.38
CTSC-207ENST00000533865 CDK11AQ9UQ88 783 aaPredicted RBP17.45■□□□□ 0.38
CTSC-207ENST00000533865 SAMD9LQ8IVG5 1584 aa17.45■□□□□ 0.38
CTSC-207ENST00000533865 NEURL4Q96JN8 1562 aa17.45■□□□□ 0.38
CTSC-207ENST00000533865 CPS1P31327 1500 aa17.44■□□□□ 0.38
CTSC-207ENST00000533865 PIP4K2BP78356 416 aa17.44■□□□□ 0.38
CTSC-207ENST00000533865 FMN1Q68DA7 1419 aa17.44■□□□□ 0.38
CTSC-207ENST00000533865 PLXNC1O60486 1568 aa17.44■□□□□ 0.38
CTSC-207ENST00000533865 DNMT1P26358 1616 aaKnown RBP17.43■□□□□ 0.38
CTSC-207ENST00000533865 CLIP1P30622 1438 aa17.42■□□□□ 0.38
CTSC-207ENST00000533865 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
CTSC-207ENST00000533865 TOM1O60784 492 aa17.41■□□□□ 0.38
CTSC-207ENST00000533865 SHANK2Q9UPX8 1470 aa17.41■□□□□ 0.38
CTSC-207ENST00000533865 ARHGAP35Q9NRY4 1499 aa17.4■□□□□ 0.38
CTSC-207ENST00000533865 PHF23Q9BUL5 403 aaPredicted RBP17.39■□□□□ 0.37
CTSC-207ENST00000533865 ATP1B4Q9UN42 357 aaPredicted RBP17.39■□□□□ 0.37
CTSC-207ENST00000533865 VWDEQ8N2E2 1590 aa17.39■□□□□ 0.37
CTSC-207ENST00000533865 A2ML1A8K2U0 1454 aa17.38■□□□□ 0.37
CTSC-207ENST00000533865 INO80Q9ULG1 1556 aaPredicted RBP17.36■□□□□ 0.37
CTSC-207ENST00000533865 RGS17Q9UGC6 210 aaPredicted RBP17.35■□□□□ 0.37
CTSC-207ENST00000533865 STRCP1A6NGW2 1772 aa17.34■□□□□ 0.37
CTSC-207ENST00000533865 ATP7AQ04656 1500 aa17.34■□□□□ 0.37
CTSC-207ENST00000533865 SYCP2Q9BX26 1530 aa17.34■□□□□ 0.37
CTSC-207ENST00000533865 A2MP01023 1474 aa17.32■□□□□ 0.36
CTSC-207ENST00000533865 UBTFP17480 764 aaKnown RBP17.31■□□□□ 0.36
CTSC-207ENST00000533865 SPAG9O60271 1321 aaKnown RBP17.3■□□□□ 0.36
CTSC-207ENST00000533865 ADGBQ8N7X0 1667 aa17.29■□□□□ 0.36
CTSC-207ENST00000533865 MED14O60244 1454 aa17.28■□□□□ 0.36
CTSC-207ENST00000533865 DEPDC5O75140 1603 aa17.28■□□□□ 0.36
CTSC-207ENST00000533865 RNF17Q9BXT8 1623 aaKnown RBP17.26■□□□□ 0.35
CTSC-207ENST00000533865 GGT6Q6P531 493 aa17.26■□□□□ 0.35
CTSC-207ENST00000533865 GPATCH8Q9UKJ3 1502 aaKnown RBP17.26■□□□□ 0.35
CTSC-207ENST00000533865 HNRNPMP52272 730 aaKnown RBP eCLIP17.25■□□□□ 0.35
CTSC-207ENST00000533865 LRRC7Q96NW7 1537 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms