RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 ONECUT3O60422 494 aaPredicted RBP7.21□□□□□ -1.26
C11orf54-213ENST00000533585 ZNF428Q96B54 188 aa7.21□□□□□ -1.26
C11orf54-213ENST00000533585 ZNF777Q9ULD5 760 aaPredicted RBP7.21□□□□□ -1.26
C11orf54-213ENST00000533585 PLEKHG3A1L390 1219 aa7.2□□□□□ -1.26
C11orf54-213ENST00000533585 PUS7Q96PZ0 661 aaKnown RBP7.2□□□□□ -1.26
C11orf54-213ENST00000533585 PYGBP11216 843 aa7.19□□□□□ -1.26
C11orf54-213ENST00000533585 FBXW7Q969H0 707 aa7.18□□□□□ -1.26
C11orf54-213ENST00000533585 RETREG2Q8NC44 543 aa7.17□□□□□ -1.26
C11orf54-213ENST00000533585 PROSER2Q86WR7 435 aaPredicted RBP7.16□□□□□ -1.26
C11orf54-213ENST00000533585 MFRPQ9BY79 579 aa7.15□□□□□ -1.26
C11orf54-213ENST00000533585 ARIH1Q9Y4X5 557 aaPredicted RBP7.15□□□□□ -1.26
C11orf54-213ENST00000533585 PCMTD1Q96MG8 357 aaPredicted RBP7.14□□□□□ -1.27
C11orf54-213ENST00000533585 GOPCQ9HD26 462 aa7.14□□□□□ -1.27
C11orf54-213ENST00000533585 MLLT3P42568 568 aaPredicted RBP7.13□□□□□ -1.27
C11orf54-213ENST00000533585 IRF5Q13568 498 aa7.13□□□□□ -1.27
C11orf54-213ENST00000533585 LARP6Q9BRS8 491 aaKnown RBP7.13□□□□□ -1.27
C11orf54-213ENST00000533585 USP35Q9P2H5 1018 aa7.13□□□□□ -1.27
C11orf54-213ENST00000533585 PPP1R37O75864 691 aa7.12□□□□□ -1.27
C11orf54-213ENST00000533585 MCM6Q14566 821 aa7.12□□□□□ -1.27
C11orf54-213ENST00000533585 RASEFQ8IZ41 740 aa7.12□□□□□ -1.27
C11orf54-213ENST00000533585 RNF39Q9H2S5 420 aa7.12□□□□□ -1.27
C11orf54-213ENST00000533585 PATL2C9JE40 543 aaKnown RBP7.11□□□□□ -1.27
C11orf54-213ENST00000533585 PDE4AP27815 886 aa7.11□□□□□ -1.27
C11orf54-213ENST00000533585 PDE4CQ08493 712 aa7.11□□□□□ -1.27
C11orf54-213ENST00000533585 ZNF467Q7Z7K2 595 aaPredicted RBP7.1□□□□□ -1.27
C11orf54-213ENST00000533585 PDAP1Q13442 181 aaKnown RBP7.09□□□□□ -1.27
C11orf54-213ENST00000533585 MINK1Q8N4C8 1332 aaPredicted RBP7.08□□□□□ -1.28
C11orf54-213ENST00000533585 NCKAP5LQ9HCH0 1330 aa7.08□□□□□ -1.28
C11orf54-213ENST00000533585 PARP9Q8IXQ6 854 aa7.08□□□□□ -1.28
C11orf54-213ENST00000533585 FNBP4Q8N3X1 1017 aaPredicted RBP7.08□□□□□ -1.28
C11orf54-213ENST00000533585 MFSD10Q14728 455 aa7.07□□□□□ -1.28
C11orf54-213ENST00000533585 AMHR2Q16671 573 aa7.07□□□□□ -1.28
C11orf54-213ENST00000533585 DDX27Q96GQ7 796 aaKnown RBP7.07□□□□□ -1.28
C11orf54-213ENST00000533585 ACIN1Q9UKV3 1341 aaKnown RBP7.06□□□□□ -1.28
C11orf54-213ENST00000533585 CCDC102AQ96A19 550 aa7.06□□□□□ -1.28
C11orf54-213ENST00000533585 POM121Q96HA1 1249 aa7.06□□□□□ -1.28
C11orf54-213ENST00000533585 MYT1LQ9UL68 1186 aa7.06□□□□□ -1.28
C11orf54-213ENST00000533585 PPP1R15AO75807 674 aaPredicted RBP7.05□□□□□ -1.28
C11orf54-213ENST00000533585 NLRP6P59044 892 aa7.05□□□□□ -1.28
C11orf54-213ENST00000533585 CAMK2BQ13554 666 aa7.05□□□□□ -1.28
C11orf54-213ENST00000533585 RSPH4AQ5TD94 716 aa7.05□□□□□ -1.28
C11orf54-213ENST00000533585 PLSCR2Q9NRY7 297 aa7.05□□□□□ -1.28
C11orf54-213ENST00000533585 MAP2K5Q13163 448 aa7.04□□□□□ -1.28
C11orf54-213ENST00000533585 CHMP4AQ9BY43 222 aa7.04□□□□□ -1.28
C11orf54-213ENST00000533585 AMOTL2Q9Y2J4 779 aa7.04□□□□□ -1.28
C11orf54-213ENST00000533585 IRF6O14896 467 aa7.02□□□□□ -1.29
C11orf54-213ENST00000533585 MNX1P50219 401 aaPredicted RBP7.02□□□□□ -1.29
C11orf54-213ENST00000533585 KCNA1Q09470 495 aa7.02□□□□□ -1.29
C11orf54-213ENST00000533585 TTLL12Q14166 644 aaPredicted RBP7.02□□□□□ -1.29
C11orf54-213ENST00000533585 FBXO22Q8NEZ5 403 aa7.02□□□□□ -1.29
C11orf54-213ENST00000533585 CREBZFQ9NS37 354 aa7.02□□□□□ -1.29
C11orf54-213ENST00000533585 GPR37O15354 613 aa7.01□□□□□ -1.29
C11orf54-213ENST00000533585 PSEN1P49768 467 aa7□□□□□ -1.29
C11orf54-213ENST00000533585 CRISPLD2Q9H0B8 497 aa7□□□□□ -1.29
C11orf54-213ENST00000533585 ZNF330Q9Y3S2 320 aaPredicted RBP7□□□□□ -1.29
C11orf54-213ENST00000533585 C1QBPQ07021 282 aaKnown RBP6.99□□□□□ -1.29
C11orf54-213ENST00000533585 CCDC27Q2M243 656 aa6.99□□□□□ -1.29
C11orf54-213ENST00000533585 SH3D19Q5HYK7 790 aa6.99□□□□□ -1.29
C11orf54-213ENST00000533585 ATP1B4Q9UN42 357 aaPredicted RBP6.99□□□□□ -1.29
C11orf54-213ENST00000533585 SOX12O15370 315 aa6.98□□□□□ -1.29
C11orf54-213ENST00000533585 BRD1O95696 1058 aa6.98□□□□□ -1.29
C11orf54-213ENST00000533585 FAM177A1Q8N128 213 aaPredicted RBP6.98□□□□□ -1.29
C11orf54-213ENST00000533585 PCDHB8Q9UN66 801 aa6.98□□□□□ -1.29
C11orf54-213ENST00000533585 PHF8Q9UPP1 1060 aa6.98□□□□□ -1.29
C11orf54-213ENST00000533585 PCDHB13Q9Y5F0 798 aa6.98□□□□□ -1.29
C11orf54-213ENST00000533585 EFCAB3Q8N7B9 438 aa6.97□□□□□ -1.29
C11orf54-213ENST00000533585 COG6Q9Y2V7 657 aa6.97□□□□□ -1.29
C11orf54-213ENST00000533585 NUTM2FA1L443 756 aa6.96□□□□□ -1.3
C11orf54-213ENST00000533585 SPDYE16A6NNV3 312 aaPredicted RBP6.96□□□□□ -1.3
C11orf54-213ENST00000533585 MS4A1P11836 297 aa6.95□□□□□ -1.3
C11orf54-213ENST00000533585 GIGYF2Q6Y7W6 1299 aaKnown RBP6.95□□□□□ -1.3
C11orf54-213ENST00000533585 SPDYE5A6NIY4 337 aa6.94□□□□□ -1.3
C11orf54-213ENST00000533585 GNPATO15228 680 aa6.94□□□□□ -1.3
C11orf54-213ENST00000533585 PRR29P0C7W0 189 aa6.94□□□□□ -1.3
C11orf54-213ENST00000533585 DPYSL4O14531 572 aa6.93□□□□□ -1.3
C11orf54-213ENST00000533585 DSG3P32926 999 aa6.93□□□□□ -1.3
C11orf54-213ENST00000533585 SKIV2LQ15477 1246 aaKnown RBP6.93□□□□□ -1.3
C11orf54-213ENST00000533585 WWC1Q8IX03 1113 aa6.93□□□□□ -1.3
C11orf54-213ENST00000533585 SPDYE1Q8NFV5 336 aaPredicted RBP6.93□□□□□ -1.3
C11orf54-213ENST00000533585 CALR3Q96L12 384 aaKnown RBP6.93□□□□□ -1.3
C11orf54-213ENST00000533585 CABP2Q9NPB3 220 aa6.92□□□□□ -1.3
C11orf54-213ENST00000533585 USTQ9Y2C2 406 aa6.92□□□□□ -1.3
C11orf54-213ENST00000533585 CSB-PGBD3P0DP91 1061 aa6.91□□□□□ -1.3
C11orf54-213ENST00000533585 PDIA6Q15084 440 aa6.91□□□□□ -1.3
C11orf54-213ENST00000533585 HIC1Q14526 733 aa6.9□□□□□ -1.3
C11orf54-213ENST00000533585 SND1Q7KZF4 910 aaKnown RBP eCLIP6.9□□□□□ -1.3
C11orf54-213ENST00000533585 ZNF579Q8NAF0 562 aaKnown RBP6.9□□□□□ -1.3
C11orf54-213ENST00000533585 OXER1Q8TDS5 423 aa6.9□□□□□ -1.3
C11orf54-213ENST00000533585 IVNS1ABPQ9Y6Y0 642 aa6.9□□□□□ -1.3
C11orf54-213ENST00000533585 PPP1R15BQ5SWA1 713 aa6.89□□□□□ -1.31
C11orf54-213ENST00000533585 PROCA1Q8NCQ7 364 aaPredicted RBP6.89□□□□□ -1.31
C11orf54-213ENST00000533585 PBXIP1Q96AQ6 731 aa6.89□□□□□ -1.31
C11orf54-213ENST00000533585 POLR3GLQ9BT43 218 aa6.89□□□□□ -1.31
C11orf54-213ENST00000533585 TSPYL2Q9H2G4 693 aaPredicted RBP6.89□□□□□ -1.31
C11orf54-213ENST00000533585 CLEC11AQ9Y240 323 aa6.89□□□□□ -1.31
C11orf54-213ENST00000533585 UNCXA6NJT0 531 aa6.88□□□□□ -1.31
C11orf54-213ENST00000533585 PPM1GO15355 546 aaPredicted RBP6.88□□□□□ -1.31
C11orf54-213ENST00000533585 FCHSD2O94868 740 aa6.88□□□□□ -1.31
C11orf54-213ENST00000533585 GRXCR2A6NFK2 248 aa6.87□□□□□ -1.31
C11orf54-213ENST00000533585 FECHP22830 423 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms