RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 MLECQ14165 292 aa13.29□□□□□ -0.28
NXF1-215ENST00000533440 ILDR2Q71H61 639 aa13.29□□□□□ -0.28
NXF1-215ENST00000533440 ARHGEF12Q9NZN5 1544 aa13.29□□□□□ -0.28
NXF1-215ENST00000533440 SOCS7O14512 581 aa13.28□□□□□ -0.28
NXF1-215ENST00000533440 DISP3Q9P2K9 1392 aa13.27□□□□□ -0.29
NXF1-215ENST00000533440 SCAPERQ9BY12 1400 aa13.27□□□□□ -0.29
NXF1-215ENST00000533440 PREX1Q8TCU6 1659 aa13.27□□□□□ -0.29
NXF1-215ENST00000533440 ATP10AO60312 1499 aa13.26□□□□□ -0.29
NXF1-215ENST00000533440 PLCH2O75038 1416 aa13.26□□□□□ -0.29
NXF1-215ENST00000533440 DMRT2Q9Y5R5 561 aa13.25□□□□□ -0.29
NXF1-215ENST00000533440 STRCQ7RTU9 1775 aa13.25□□□□□ -0.29
NXF1-215ENST00000533440 C9orf84Q5VXU9 1444 aa13.24□□□□□ -0.29
NXF1-215ENST00000533440 RANGAP1P46060 587 aaPredicted RBP13.23□□□□□ -0.29
NXF1-215ENST00000533440 CEBPAP49715 358 aaPredicted RBP13.23□□□□□ -0.29
NXF1-215ENST00000533440 CDK13Q14004 1512 aaKnown RBP13.21□□□□□ -0.29
NXF1-215ENST00000533440 SETD1BQ9UPS6 1966 aaKnown RBP13.2□□□□□ -0.3
NXF1-215ENST00000533440 EFCAB2Q5VUJ9 269 aa13.2□□□□□ -0.3
NXF1-215ENST00000533440 UHRF1BP1Q6BDS2 1440 aa13.2□□□□□ -0.3
NXF1-215ENST00000533440 PTPRTO14522 1441 aa13.19□□□□□ -0.3
NXF1-215ENST00000533440 EEA1Q15075 1411 aa13.19□□□□□ -0.3
NXF1-215ENST00000533440 ZNF518AQ6AHZ1 1483 aa13.17□□□□□ -0.3
NXF1-215ENST00000533440 KDM5CP41229 1560 aa13.17□□□□□ -0.3
NXF1-215ENST00000533440 MYO5CQ9NQX4 1742 aa13.16□□□□□ -0.3
NXF1-215ENST00000533440 SPATA31D1Q6ZQQ2 1576 aa13.16□□□□□ -0.3
NXF1-215ENST00000533440 REREQ9P2R6 1566 aa13.15□□□□□ -0.3
NXF1-215ENST00000533440 LTBP4Q8N2S1 1624 aa13.15□□□□□ -0.3
NXF1-215ENST00000533440 AFAP1Q8N556 730 aa13.15□□□□□ -0.3
NXF1-215ENST00000533440 IQSEC2Q5JU85 1478 aa13.14□□□□□ -0.31
NXF1-215ENST00000533440 DIP2CQ9Y2E4 1556 aa13.14□□□□□ -0.31
NXF1-215ENST00000533440 C3P01024 1663 aa13.12□□□□□ -0.31
NXF1-215ENST00000533440 CDK11AQ9UQ88 783 aaPredicted RBP13.12□□□□□ -0.31
NXF1-215ENST00000533440 KIF14Q15058 1648 aa13.12□□□□□ -0.31
NXF1-215ENST00000533440 TRAPPC8Q9Y2L5 1435 aa13.12□□□□□ -0.31
NXF1-215ENST00000533440 MLH3Q9UHC1 1453 aa13.11□□□□□ -0.31
NXF1-215ENST00000533440 AGLP35573 1532 aa13.11□□□□□ -0.31
NXF1-215ENST00000533440 ARHGAP5Q13017 1502 aa13.1□□□□□ -0.31
NXF1-215ENST00000533440 TROQ12816 1431 aaPredicted RBP13.1□□□□□ -0.31
NXF1-215ENST00000533440 NCOA1Q15788 1441 aa13.1□□□□□ -0.31
NXF1-215ENST00000533440 FMN1Q68DA7 1419 aa13.1□□□□□ -0.31
NXF1-215ENST00000533440 ABCA6Q8N139 1617 aa13.1□□□□□ -0.31
NXF1-215ENST00000533440 MYT1LQ9UL68 1186 aa13.07□□□□□ -0.32
NXF1-215ENST00000533440 ATP1B4Q9UN42 357 aaPredicted RBP13.07□□□□□ -0.32
NXF1-215ENST00000533440 CNTLNQ9NXG0 1405 aa13.06□□□□□ -0.32
NXF1-215ENST00000533440 ARHGAP35Q9NRY4 1499 aa13.06□□□□□ -0.32
NXF1-215ENST00000533440 CDC42BPBQ9Y5S2 1711 aa13.06□□□□□ -0.32
NXF1-215ENST00000533440 ESF1Q9H501 851 aaKnown RBP13.06□□□□□ -0.32
NXF1-215ENST00000533440 CLIP1P30622 1438 aa13.05□□□□□ -0.32
NXF1-215ENST00000533440 ABCC1P33527 1531 aa13.04□□□□□ -0.32
NXF1-215ENST00000533440 NPATQ14207 1427 aa13.04□□□□□ -0.32
NXF1-215ENST00000533440 CAMSAP1Q5T5Y3 1602 aa13.03□□□□□ -0.32
NXF1-215ENST00000533440 PREX2Q70Z35 1606 aa13.02□□□□□ -0.32
NXF1-215ENST00000533440 KIDINS220Q9ULH0 1771 aa13.02□□□□□ -0.32
NXF1-215ENST00000533440 ITSN2Q9NZM3 1697 aa13.02□□□□□ -0.33
NXF1-215ENST00000533440 LRRIQ1Q96JM4 1722 aa13.02□□□□□ -0.33
NXF1-215ENST00000533440 MROH2AA6NES4 1674 aa13.01□□□□□ -0.33
NXF1-215ENST00000533440 ZMYM3Q14202 1370 aa13□□□□□ -0.33
NXF1-215ENST00000533440 ZNF335Q9H4Z2 1342 aaPredicted RBP13□□□□□ -0.33
NXF1-215ENST00000533440 NCKAP5LQ9HCH0 1330 aa12.99□□□□□ -0.33
NXF1-215ENST00000533440 UBAP1LF5GYI3 381 aa12.99□□□□□ -0.33
NXF1-215ENST00000533440 UBTFP17480 764 aaKnown RBP12.99□□□□□ -0.33
NXF1-215ENST00000533440 PLA2R1Q13018 1463 aa12.98□□□□□ -0.33
NXF1-215ENST00000533440 PKD2Q13563 968 aa12.97□□□□□ -0.33
NXF1-215ENST00000533440 SAMD9LQ8IVG5 1584 aa12.97□□□□□ -0.33
NXF1-215ENST00000533440 TCOF1Q13428 1488 aaKnown RBP12.97□□□□□ -0.33
NXF1-215ENST00000533440 ZNF142P52746 1687 aaPredicted RBP12.96□□□□□ -0.34
NXF1-215ENST00000533440 CDC42BPAQ5VT25 1732 aa12.95□□□□□ -0.34
NXF1-215ENST00000533440 CCDC18Q5T9S5 1454 aa12.94□□□□□ -0.34
NXF1-215ENST00000533440 MYO3AQ8NEV4 1616 aa12.94□□□□□ -0.34
NXF1-215ENST00000533440 PTPRKQ15262 1439 aa12.94□□□□□ -0.34
NXF1-215ENST00000533440 CEP170BQ9Y4F5 1589 aaPredicted RBP12.94□□□□□ -0.34
NXF1-215ENST00000533440 EHMT2Q96KQ7 1210 aa12.93□□□□□ -0.34
NXF1-215ENST00000533440 CASKIN1Q8WXD9 1431 aa12.93□□□□□ -0.34
NXF1-215ENST00000533440 PLXNC1O60486 1568 aa12.93□□□□□ -0.34
NXF1-215ENST00000533440 SPAG9O60271 1321 aaKnown RBP12.92□□□□□ -0.34
NXF1-215ENST00000533440 CLTCQ00610 1675 aaKnown RBP12.92□□□□□ -0.34
NXF1-215ENST00000533440 SUPT6HQ7KZ85 1726 aaKnown RBP12.91□□□□□ -0.34
NXF1-215ENST00000533440 PPP6R1Q9UPN7 881 aa12.91□□□□□ -0.34
NXF1-215ENST00000533440 SYCP2Q9BX26 1530 aa12.91□□□□□ -0.34
NXF1-215ENST00000533440 ATP7AQ04656 1500 aa12.9□□□□□ -0.34
NXF1-215ENST00000533440 GPATCH8Q9UKJ3 1502 aaKnown RBP12.9□□□□□ -0.34
NXF1-215ENST00000533440 HNRNPMP52272 730 aaKnown RBP eCLIP12.9□□□□□ -0.34
NXF1-215ENST00000533440 A2MP01023 1474 aa12.9□□□□□ -0.34
NXF1-215ENST00000533440 KIAA1107Q9UPP5 1409 aa12.89□□□□□ -0.35
NXF1-215ENST00000533440 ZNF777Q9ULD5 760 aaPredicted RBP12.89□□□□□ -0.35
NXF1-215ENST00000533440 MED1Q15648 1581 aaPredicted RBP12.89□□□□□ -0.35
NXF1-215ENST00000533440 INO80Q9ULG1 1556 aaPredicted RBP12.89□□□□□ -0.35
NXF1-215ENST00000533440 HSPA1LP34931 641 aa12.88□□□□□ -0.35
NXF1-215ENST00000533440 A2ML1A8K2U0 1454 aa12.87□□□□□ -0.35
NXF1-215ENST00000533440 GGT6Q6P531 493 aa12.87□□□□□ -0.35
NXF1-215ENST00000533440 PLEKHH2Q8IVE3 1493 aa12.86□□□□□ -0.35
NXF1-215ENST00000533440 DNMT1P26358 1616 aaKnown RBP12.86□□□□□ -0.35
NXF1-215ENST00000533440 CPS1P31327 1500 aa12.86□□□□□ -0.35
NXF1-215ENST00000533440 FYCO1Q9BQS8 1478 aa12.85□□□□□ -0.35
NXF1-215ENST00000533440 TOM1O60784 492 aa12.85□□□□□ -0.35
NXF1-215ENST00000533440 CFDP1Q9UEE9 299 aaPredicted RBP12.84□□□□□ -0.35
NXF1-215ENST00000533440 NEURL4Q96JN8 1562 aa12.84□□□□□ -0.35
NXF1-215ENST00000533440 SHANK2Q9UPX8 1470 aa12.84□□□□□ -0.35
NXF1-215ENST00000533440 PIP4K2BP78356 416 aa12.83□□□□□ -0.36
NXF1-215ENST00000533440 SCAF1Q9H7N4 1312 aaKnown RBP12.83□□□□□ -0.36
NXF1-215ENST00000533440 ADGBQ8N7X0 1667 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms