RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 SCAPERQ9BY12 1400 aa17.93■□□□□ 0.46
CTNND1-235ENST00000533189 CDK13Q14004 1512 aaKnown RBP17.93■□□□□ 0.46
CTNND1-235ENST00000533189 PREX1Q8TCU6 1659 aa17.91■□□□□ 0.46
CTNND1-235ENST00000533189 PLCH2O75038 1416 aa17.9■□□□□ 0.46
CTNND1-235ENST00000533189 ATP10AO60312 1499 aa17.89■□□□□ 0.45
CTNND1-235ENST00000533189 ARHGEF12Q9NZN5 1544 aa17.89■□□□□ 0.45
CTNND1-235ENST00000533189 MYO5CQ9NQX4 1742 aa17.89■□□□□ 0.45
CTNND1-235ENST00000533189 C9orf84Q5VXU9 1444 aa17.89■□□□□ 0.45
CTNND1-235ENST00000533189 EFCAB2Q5VUJ9 269 aa17.86■□□□□ 0.45
CTNND1-235ENST00000533189 ATP1B4Q9UN42 357 aaPredicted RBP17.86■□□□□ 0.45
CTNND1-235ENST00000533189 DMRT2Q9Y5R5 561 aa17.84■□□□□ 0.45
CTNND1-235ENST00000533189 SETD1BQ9UPS6 1966 aaKnown RBP17.83■□□□□ 0.44
CTNND1-235ENST00000533189 CEBPAP49715 358 aaPredicted RBP17.83■□□□□ 0.44
CTNND1-235ENST00000533189 CDK11AQ9UQ88 783 aaPredicted RBP17.82■□□□□ 0.44
CTNND1-235ENST00000533189 ZNF518AQ6AHZ1 1483 aa17.82■□□□□ 0.44
CTNND1-235ENST00000533189 UHRF1BP1Q6BDS2 1440 aa17.81■□□□□ 0.44
CTNND1-235ENST00000533189 MYT1LQ9UL68 1186 aa17.81■□□□□ 0.44
CTNND1-235ENST00000533189 STRCQ7RTU9 1775 aa17.81■□□□□ 0.44
CTNND1-235ENST00000533189 KIF14Q15058 1648 aa17.8■□□□□ 0.44
CTNND1-235ENST00000533189 FMN1Q68DA7 1419 aa17.8■□□□□ 0.44
CTNND1-235ENST00000533189 ARHGAP5Q13017 1502 aa17.79■□□□□ 0.44
CTNND1-235ENST00000533189 DISP3Q9P2K9 1392 aa17.79■□□□□ 0.44
CTNND1-235ENST00000533189 KDM5CP41229 1560 aa17.77■□□□□ 0.44
CTNND1-235ENST00000533189 CLIP1P30622 1438 aa17.75■□□□□ 0.43
CTNND1-235ENST00000533189 UBTFP17480 764 aaKnown RBP17.75■□□□□ 0.43
CTNND1-235ENST00000533189 AFAP1Q8N556 730 aa17.75■□□□□ 0.43
CTNND1-235ENST00000533189 DIP2CQ9Y2E4 1556 aa17.74■□□□□ 0.43
CTNND1-235ENST00000533189 TROQ12816 1431 aaPredicted RBP17.74■□□□□ 0.43
CTNND1-235ENST00000533189 ESF1Q9H501 851 aaKnown RBP17.74■□□□□ 0.43
CTNND1-235ENST00000533189 REREQ9P2R6 1566 aa17.74■□□□□ 0.43
CTNND1-235ENST00000533189 C3P01024 1663 aa17.74■□□□□ 0.43
CTNND1-235ENST00000533189 EHMT2Q96KQ7 1210 aa17.73■□□□□ 0.43
CTNND1-235ENST00000533189 ARHGAP35Q9NRY4 1499 aa17.72■□□□□ 0.43
CTNND1-235ENST00000533189 ILDR2Q71H61 639 aa17.71■□□□□ 0.43
CTNND1-235ENST00000533189 CDC42BPBQ9Y5S2 1711 aa17.71■□□□□ 0.43
CTNND1-235ENST00000533189 ABCA6Q8N139 1617 aa17.71■□□□□ 0.43
CTNND1-235ENST00000533189 PTPRTO14522 1441 aa17.71■□□□□ 0.43
CTNND1-235ENST00000533189 MLH3Q9UHC1 1453 aa17.69■□□□□ 0.42
CTNND1-235ENST00000533189 SOCS7O14512 581 aa17.69■□□□□ 0.42
CTNND1-235ENST00000533189 LRRIQ1Q96JM4 1722 aa17.69■□□□□ 0.42
CTNND1-235ENST00000533189 AGLP35573 1532 aa17.67■□□□□ 0.42
CTNND1-235ENST00000533189 SPATA31D1Q6ZQQ2 1576 aa17.67■□□□□ 0.42
CTNND1-235ENST00000533189 PREX2Q70Z35 1606 aa17.67■□□□□ 0.42
CTNND1-235ENST00000533189 TRAPPC8Q9Y2L5 1435 aa17.66■□□□□ 0.42
CTNND1-235ENST00000533189 ITSN2Q9NZM3 1697 aa17.66■□□□□ 0.42
CTNND1-235ENST00000533189 ABCC1P33527 1531 aa17.65■□□□□ 0.42
CTNND1-235ENST00000533189 CNTLNQ9NXG0 1405 aa17.64■□□□□ 0.41
CTNND1-235ENST00000533189 KIDINS220Q9ULH0 1771 aa17.63■□□□□ 0.41
CTNND1-235ENST00000533189 IQSEC2Q5JU85 1478 aa17.63■□□□□ 0.41
CTNND1-235ENST00000533189 LTBP4Q8N2S1 1624 aa17.62■□□□□ 0.41
CTNND1-235ENST00000533189 NCOA1Q15788 1441 aa17.61■□□□□ 0.41
CTNND1-235ENST00000533189 CCDC18Q5T9S5 1454 aa17.6■□□□□ 0.41
CTNND1-235ENST00000533189 CDC42BPAQ5VT25 1732 aa17.6■□□□□ 0.41
CTNND1-235ENST00000533189 MROH2AA6NES4 1674 aa17.59■□□□□ 0.41
CTNND1-235ENST00000533189 CAMSAP1Q5T5Y3 1602 aa17.58■□□□□ 0.4
CTNND1-235ENST00000533189 NPATQ14207 1427 aa17.56■□□□□ 0.4
CTNND1-235ENST00000533189 CASKIN1Q8WXD9 1431 aa17.55■□□□□ 0.4
CTNND1-235ENST00000533189 SAMD9LQ8IVG5 1584 aa17.55■□□□□ 0.4
CTNND1-235ENST00000533189 SUPT6HQ7KZ85 1726 aaKnown RBP17.55■□□□□ 0.4
CTNND1-235ENST00000533189 ZNF777Q9ULD5 760 aaPredicted RBP17.54■□□□□ 0.4
CTNND1-235ENST00000533189 ZMYM3Q14202 1370 aa17.53■□□□□ 0.4
CTNND1-235ENST00000533189 SPAG9O60271 1321 aaKnown RBP17.52■□□□□ 0.4
CTNND1-235ENST00000533189 CLTCQ00610 1675 aaKnown RBP17.52■□□□□ 0.39
CTNND1-235ENST00000533189 NCKAP5LQ9HCH0 1330 aa17.51■□□□□ 0.39
CTNND1-235ENST00000533189 SYCP2Q9BX26 1530 aa17.51■□□□□ 0.39
CTNND1-235ENST00000533189 UBAP1LF5GYI3 381 aa17.5■□□□□ 0.39
CTNND1-235ENST00000533189 ZNF142P52746 1687 aaPredicted RBP17.5■□□□□ 0.39
CTNND1-235ENST00000533189 MYO3AQ8NEV4 1616 aa17.49■□□□□ 0.39
CTNND1-235ENST00000533189 ZNF335Q9H4Z2 1342 aaPredicted RBP17.48■□□□□ 0.39
CTNND1-235ENST00000533189 ATP7AQ04656 1500 aa17.48■□□□□ 0.39
CTNND1-235ENST00000533189 FYCO1Q9BQS8 1478 aa17.48■□□□□ 0.39
CTNND1-235ENST00000533189 HNRNPMP52272 730 aaKnown RBP eCLIP17.47■□□□□ 0.395e-7■■■■□ 21
CTNND1-235ENST00000533189 PKD2Q13563 968 aa17.47■□□□□ 0.39
CTNND1-235ENST00000533189 PLA2R1Q13018 1463 aa17.47■□□□□ 0.39
CTNND1-235ENST00000533189 GPATCH8Q9UKJ3 1502 aaKnown RBP17.47■□□□□ 0.39
CTNND1-235ENST00000533189 CEP170BQ9Y4F5 1589 aaPredicted RBP17.46■□□□□ 0.39
CTNND1-235ENST00000533189 A2MP01023 1474 aa17.45■□□□□ 0.38
CTNND1-235ENST00000533189 PLEKHH2Q8IVE3 1493 aa17.45■□□□□ 0.38
CTNND1-235ENST00000533189 PLXNC1O60486 1568 aa17.45■□□□□ 0.38
CTNND1-235ENST00000533189 INO80Q9ULG1 1556 aaPredicted RBP17.45■□□□□ 0.38
CTNND1-235ENST00000533189 GGT6Q6P531 493 aa17.44■□□□□ 0.38
CTNND1-235ENST00000533189 PTPRKQ15262 1439 aa17.44■□□□□ 0.38
CTNND1-235ENST00000533189 KIAA1107Q9UPP5 1409 aa17.43■□□□□ 0.38
CTNND1-235ENST00000533189 TCOF1Q13428 1488 aaKnown RBP17.43■□□□□ 0.38
CTNND1-235ENST00000533189 CFDP1Q9UEE9 299 aaPredicted RBP17.42■□□□□ 0.38
CTNND1-235ENST00000533189 ADGBQ8N7X0 1667 aa17.42■□□□□ 0.38
CTNND1-235ENST00000533189 CHIC1Q5VXU3 224 aa17.41■□□□□ 0.38
CTNND1-235ENST00000533189 PPP6R1Q9UPN7 881 aa17.41■□□□□ 0.38
CTNND1-235ENST00000533189 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
CTNND1-235ENST00000533189 SCAF1Q9H7N4 1312 aaKnown RBP17.37■□□□□ 0.37
CTNND1-235ENST00000533189 A2ML1A8K2U0 1454 aa17.37■□□□□ 0.37
CTNND1-235ENST00000533189 POLR1AO95602 1720 aaPredicted RBP17.36■□□□□ 0.37
CTNND1-235ENST00000533189 DNMT1P26358 1616 aaKnown RBP17.36■□□□□ 0.37
CTNND1-235ENST00000533189 MTUS2Q5JR59 1369 aa17.35■□□□□ 0.37
CTNND1-235ENST00000533189 PIP4K2BP78356 416 aa17.32■□□□□ 0.36
CTNND1-235ENST00000533189 CPS1P31327 1500 aa17.31■□□□□ 0.36
CTNND1-235ENST00000533189 TOM1O60784 492 aa17.31■□□□□ 0.36
CTNND1-235ENST00000533189 HSPA1LP34931 641 aa17.3■□□□□ 0.36
CTNND1-235ENST00000533189 TIAM1Q13009 1591 aa17.3■□□□□ 0.36
CTNND1-235ENST00000533189 MED1Q15648 1581 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms