RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 PLCH2O75038 1416 aa15.34■□□□□ 0.05
VPS26B-207ENST00000532160 FMN1Q68DA7 1419 aa15.34■□□□□ 0.05
VPS26B-207ENST00000532160 PCF11O94913 1555 aaKnown RBP15.33■□□□□ 0.05
VPS26B-207ENST00000532160 ATP1B4Q9UN42 357 aaPredicted RBP15.33■□□□□ 0.04
VPS26B-207ENST00000532160 POGZQ7Z3K3 1410 aa15.33■□□□□ 0.04
VPS26B-207ENST00000532160 KIF14Q15058 1648 aa15.32■□□□□ 0.04
VPS26B-207ENST00000532160 SCAPERQ9BY12 1400 aa15.32■□□□□ 0.04
VPS26B-207ENST00000532160 LMTK3Q96Q04 1460 aa15.32■□□□□ 0.04
VPS26B-207ENST00000532160 MYO5CQ9NQX4 1742 aa15.31■□□□□ 0.04
VPS26B-207ENST00000532160 LRRIQ1Q96JM4 1722 aa15.31■□□□□ 0.04
VPS26B-207ENST00000532160 MAGI2Q86UL8 1455 aa15.3■□□□□ 0.04
VPS26B-207ENST00000532160 FER1L4A9Z1Z3 1794 aa15.27■□□□□ 0.04
VPS26B-207ENST00000532160 ADRA2BP18089 450 aa15.27■□□□□ 0.04
VPS26B-207ENST00000532160 TROQ12816 1431 aaPredicted RBP15.26■□□□□ 0.03
VPS26B-207ENST00000532160 MLECQ14165 292 aa15.26■□□□□ 0.03
VPS26B-207ENST00000532160 CDK11AQ9UQ88 783 aaPredicted RBP15.25■□□□□ 0.03
VPS26B-207ENST00000532160 EFCAB2Q5VUJ9 269 aa15.24■□□□□ 0.03
VPS26B-207ENST00000532160 ARHGAP5Q13017 1502 aa15.23■□□□□ 0.03
VPS26B-207ENST00000532160 ATP10AO60312 1499 aa15.23■□□□□ 0.03
VPS26B-207ENST00000532160 HSPA2P54652 639 aa15.23■□□□□ 0.03
VPS26B-207ENST00000532160 C9orf84Q5VXU9 1444 aa15.23■□□□□ 0.03
VPS26B-207ENST00000532160 ARHGEF12Q9NZN5 1544 aa15.22■□□□□ 0.03
VPS26B-207ENST00000532160 CLIP1P30622 1438 aa15.22■□□□□ 0.03
VPS26B-207ENST00000532160 CDC42BPBQ9Y5S2 1711 aa15.22■□□□□ 0.03
VPS26B-207ENST00000532160 ZNF518AQ6AHZ1 1483 aa15.21■□□□□ 0.03
VPS26B-207ENST00000532160 KDM5CP41229 1560 aa15.21■□□□□ 0.03
VPS26B-207ENST00000532160 FBXO41Q8TF61 875 aa15.21■□□□□ 0.03
VPS26B-207ENST00000532160 AFAP1Q8N556 730 aa15.2■□□□□ 0.02
VPS26B-207ENST00000532160 LOC105371045A0A1W2PR82 267 aa15.19■□□□□ 0.02
VPS26B-207ENST00000532160 CASKIN1Q8WXD9 1431 aa15.18■□□□□ 0.02
VPS26B-207ENST00000532160 PREX2Q70Z35 1606 aa15.18■□□□□ 0.02
VPS26B-207ENST00000532160 DIP2CQ9Y2E4 1556 aa15.18■□□□□ 0.02
VPS26B-207ENST00000532160 CCDC18Q5T9S5 1454 aa15.16■□□□□ 0.02
VPS26B-207ENST00000532160 ABCA6Q8N139 1617 aa15.16■□□□□ 0.02
VPS26B-207ENST00000532160 ABCC1P33527 1531 aa15.16■□□□□ 0.02
VPS26B-207ENST00000532160 TRAPPC8Q9Y2L5 1435 aa15.15■□□□□ 0.02
VPS26B-207ENST00000532160 ITSN2Q9NZM3 1697 aa15.15■□□□□ 0.02
VPS26B-207ENST00000532160 CDC42BPAQ5VT25 1732 aa15.14■□□□□ 0.01
VPS26B-207ENST00000532160 PREX1Q8TCU6 1659 aa15.14■□□□□ 0.01
VPS26B-207ENST00000532160 CEBPAP49715 358 aaPredicted RBP15.14■□□□□ 0.01
VPS26B-207ENST00000532160 REREQ9P2R6 1566 aa15.13■□□□□ 0.01
VPS26B-207ENST00000532160 MYT1LQ9UL68 1186 aa15.13■□□□□ 0.01
VPS26B-207ENST00000532160 MLH3Q9UHC1 1453 aa15.13■□□□□ 0.01
VPS26B-207ENST00000532160 PIAS4Q8N2W9 510 aaPredicted RBP15.12■□□□□ 0.01
VPS26B-207ENST00000532160 FYCO1Q9BQS8 1478 aa15.12■□□□□ 0.01
VPS26B-207ENST00000532160 KIDINS220Q9ULH0 1771 aa15.1■□□□□ 0.01
VPS26B-207ENST00000532160 SETD1BQ9UPS6 1966 aaKnown RBP15.08■□□□□ 0
VPS26B-207ENST00000532160 C3P01024 1663 aa15.08■□□□□ 0
VPS26B-207ENST00000532160 AGLP35573 1532 aa15.07■□□□□ 0
VPS26B-207ENST00000532160 SAMD9LQ8IVG5 1584 aa15.07■□□□□ 0
VPS26B-207ENST00000532160 STRCQ7RTU9 1775 aa15.07■□□□□ 0
VPS26B-207ENST00000532160 SYCP2Q9BX26 1530 aa15.06■□□□□ 0
VPS26B-207ENST00000532160 GPATCH8Q9UKJ3 1502 aaKnown RBP15.06■□□□□ 0
VPS26B-207ENST00000532160 UHRF1BP1Q6BDS2 1440 aa15.05■□□□□ -0
VPS26B-207ENST00000532160 ZNF777Q9ULD5 760 aaPredicted RBP15.04■□□□□ -0
VPS26B-207ENST00000532160 CERKQ8TCT0 537 aa15.03■□□□□ -0
VPS26B-207ENST00000532160 HNRNPMP52272 730 aaKnown RBP eCLIP15□□□□□ -0.011e-6■■■■□ 22.8
VPS26B-207ENST00000532160 SUPT6HQ7KZ85 1726 aaKnown RBP15□□□□□ -0.01
VPS26B-207ENST00000532160 ESF1Q9H501 851 aaKnown RBP14.99□□□□□ -0.01
VPS26B-207ENST00000532160 CNTLNQ9NXG0 1405 aa14.99□□□□□ -0.01
VPS26B-207ENST00000532160 INO80Q9ULG1 1556 aaPredicted RBP14.98□□□□□ -0.01
VPS26B-207ENST00000532160 SPAG9O60271 1321 aaKnown RBP14.98□□□□□ -0.01
VPS26B-207ENST00000532160 ATP7AQ04656 1500 aa14.98□□□□□ -0.01
VPS26B-207ENST00000532160 CCNB3Q8WWL7 1395 aa14.98□□□□□ -0.01
VPS26B-207ENST00000532160 MSH5O43196 834 aa14.97□□□□□ -0.01
VPS26B-207ENST00000532160 CFDP1Q9UEE9 299 aaPredicted RBP14.97□□□□□ -0.01
VPS26B-207ENST00000532160 KIAA1107Q9UPP5 1409 aa14.97□□□□□ -0.01
VPS26B-207ENST00000532160 PLXNC1O60486 1568 aa14.97□□□□□ -0.01
VPS26B-207ENST00000532160 MTUS2Q5JR59 1369 aa14.97□□□□□ -0.01
VPS26B-207ENST00000532160 MROH2AA6NES4 1674 aa14.97□□□□□ -0.01
VPS26B-207ENST00000532160 PLEKHH2Q8IVE3 1493 aa14.95□□□□□ -0.02
VPS26B-207ENST00000532160 TIAM1Q13009 1591 aa14.95□□□□□ -0.02
VPS26B-207ENST00000532160 CEP162Q5TB80 1403 aa14.95□□□□□ -0.02
VPS26B-207ENST00000532160 DMRT2Q9Y5R5 561 aa14.95□□□□□ -0.02
VPS26B-207ENST00000532160 CLTCQ00610 1675 aaKnown RBP14.94□□□□□ -0.02
VPS26B-207ENST00000532160 A2MP01023 1474 aa14.94□□□□□ -0.02
VPS26B-207ENST00000532160 PTPRTO14522 1441 aa14.93□□□□□ -0.02
VPS26B-207ENST00000532160 NCOA1Q15788 1441 aa14.93□□□□□ -0.02
VPS26B-207ENST00000532160 ZMYM3Q14202 1370 aa14.93□□□□□ -0.02
VPS26B-207ENST00000532160 ZNF644Q9H582 1327 aaPredicted RBP14.92□□□□□ -0.02
VPS26B-207ENST00000532160 NPATQ14207 1427 aa14.92□□□□□ -0.02
VPS26B-207ENST00000532160 EHBP1L1Q8N3D4 1523 aa14.92□□□□□ -0.02
VPS26B-207ENST00000532160 CAMSAP1Q5T5Y3 1602 aa14.91□□□□□ -0.02
VPS26B-207ENST00000532160 ADGBQ8N7X0 1667 aa14.9□□□□□ -0.02
VPS26B-207ENST00000532160 MBD5Q9P267 1494 aa14.9□□□□□ -0.02
VPS26B-207ENST00000532160 LTBP4Q8N2S1 1624 aa14.89□□□□□ -0.03
VPS26B-207ENST00000532160 MYO3AQ8NEV4 1616 aa14.88□□□□□ -0.03
VPS26B-207ENST00000532160 GGT6Q6P531 493 aa14.88□□□□□ -0.03
VPS26B-207ENST00000532160 PTPRKQ15262 1439 aa14.88□□□□□ -0.03
VPS26B-207ENST00000532160 ZNF142P52746 1687 aaPredicted RBP14.87□□□□□ -0.03
VPS26B-207ENST00000532160 CEP170BQ9Y4F5 1589 aaPredicted RBP14.85□□□□□ -0.03
VPS26B-207ENST00000532160 NCKAP5LQ9HCH0 1330 aa14.85□□□□□ -0.03
VPS26B-207ENST00000532160 NCOA2Q15596 1464 aa14.84□□□□□ -0.03
VPS26B-207ENST00000532160 RTEL1-TNFRSF6BF6WH68 1400 aa14.83□□□□□ -0.03
VPS26B-207ENST00000532160 CAMSAP2Q08AD1 1489 aa14.83□□□□□ -0.03
VPS26B-207ENST00000532160 CCDC141Q6ZP82 1450 aa14.82□□□□□ -0.04
VPS26B-207ENST00000532160 DHX29Q7Z478 1369 aaKnown RBP14.82□□□□□ -0.04
VPS26B-207ENST00000532160 PLA2R1Q13018 1463 aa14.82□□□□□ -0.04
VPS26B-207ENST00000532160 TCOF1Q13428 1488 aaKnown RBP14.81□□□□□ -0.04
VPS26B-207ENST00000532160 IQSEC2Q5JU85 1478 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms