RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 MARVELD3Q96A59 401 aa16.15■□□□□ 0.18
CHKA-205ENST00000530730 ZSWIM6Q9HCJ5 1215 aa16.15■□□□□ 0.18
CHKA-205ENST00000530730 RYDENQ9NUL5 291 aaKnown RBP16.15■□□□□ 0.18
CHKA-205ENST00000530730 PPP1R37O75864 691 aa16.14■□□□□ 0.17
CHKA-205ENST00000530730 HOXB1P14653 301 aaPredicted RBP16.14■□□□□ 0.17
CHKA-205ENST00000530730 ZNF710Q8N1W2 664 aa16.14■□□□□ 0.17
CHKA-205ENST00000530730 EMP3P54852 163 aa16.13■□□□□ 0.17
CHKA-205ENST00000530730 NKX1-1Q15270 411 aaPredicted RBP16.12■□□□□ 0.17
CHKA-205ENST00000530730 C2orf72A6NCS6 295 aa16.07■□□□□ 0.16
CHKA-205ENST00000530730 PLSCR2Q9NRY7 297 aa16.04■□□□□ 0.16
CHKA-205ENST00000530730 GPR153Q6NV75 609 aa16.02■□□□□ 0.16
CHKA-205ENST00000530730 TMC2Q8TDI7 906 aa16.02■□□□□ 0.16
CHKA-205ENST00000530730 HS3ST6Q96QI5 342 aa16.01■□□□□ 0.15
CHKA-205ENST00000530730 ABCC9O60706 1549 aa15.99■□□□□ 0.15
CHKA-205ENST00000530730 FAM205CA6NFA0 338 aa15.99■□□□□ 0.15
CHKA-205ENST00000530730 AMER1Q5JTC6 1135 aaPredicted RBP15.98■□□□□ 0.15
CHKA-205ENST00000530730 SLC34A2O95436 690 aa15.97■□□□□ 0.15
CHKA-205ENST00000530730 POTEB3A0JP26 581 aa15.96■□□□□ 0.15
CHKA-205ENST00000530730 POTEBQ6S5H4 581 aa15.96■□□□□ 0.15
CHKA-205ENST00000530730 DCAF8L2P0C7V8 631 aa15.94■□□□□ 0.14
CHKA-205ENST00000530730 GTPBP6O43824 516 aaPredicted RBP15.93■□□□□ 0.14
CHKA-205ENST00000530730 GPHNQ9NQX3 736 aaPredicted RBP15.93■□□□□ 0.14
CHKA-205ENST00000530730 FOXK1P85037 733 aa15.91■□□□□ 0.14
CHKA-205ENST00000530730 ERBB3P21860 1342 aa15.91■□□□□ 0.14
CHKA-205ENST00000530730 ARSIQ5FYB1 569 aa15.89■□□□□ 0.13
CHKA-205ENST00000530730 KRTAP3-3Q9BYR6 98 aa15.85■□□□□ 0.13
CHKA-205ENST00000530730 KRTAP3-2Q9BYR7 98 aa15.85■□□□□ 0.13
CHKA-205ENST00000530730 CRISPLD2Q9H0B8 497 aa15.83■□□□□ 0.12
CHKA-205ENST00000530730 VARS2Q5ST30 1063 aaKnown RBP15.82■□□□□ 0.12
CHKA-205ENST00000530730 PCDHGA4Q9Y5G9 962 aa15.82■□□□□ 0.12
CHKA-205ENST00000530730 PLPP6Q8IY26 295 aa15.81■□□□□ 0.12
CHKA-205ENST00000530730 CCDC180Q9P1Z9 1646 aa15.81■□□□□ 0.12
CHKA-205ENST00000530730 DSG2Q14126 1118 aa15.8■□□□□ 0.12
CHKA-205ENST00000530730 PTCD2Q8WV60 388 aaKnown RBP15.8■□□□□ 0.12
CHKA-205ENST00000530730 RTN4Q9NQC3 1192 aaKnown RBP15.8■□□□□ 0.12
CHKA-205ENST00000530730 ZNF316A6NFI3 1004 aaPredicted RBP15.79■□□□□ 0.12
CHKA-205ENST00000530730 KHSRPQ92945 711 aaKnown RBP eCLIP15.79■□□□□ 0.122e-6■□□□□ 10.7
CHKA-205ENST00000530730 ZNF687Q8N1G0 1237 aa15.78■□□□□ 0.12
CHKA-205ENST00000530730 SPNS2Q8IVW8 549 aa15.76■□□□□ 0.11
CHKA-205ENST00000530730 BBXQ8WY36 941 aaPredicted RBP15.75■□□□□ 0.11
CHKA-205ENST00000530730 NUDT7P0C024 238 aa15.74■□□□□ 0.11
CHKA-205ENST00000530730 PDE4AP27815 886 aa15.74■□□□□ 0.11
CHKA-205ENST00000530730 NCKAP5LQ9HCH0 1330 aa15.72■□□□□ 0.11
CHKA-205ENST00000530730 KDM4FA0A1W2PPD8 638 aa15.72■□□□□ 0.11
CHKA-205ENST00000530730 PPP1R15BQ5SWA1 713 aa15.68■□□□□ 0.1
CHKA-205ENST00000530730 TBC1D12O60347 775 aa15.67■□□□□ 0.1
CHKA-205ENST00000530730 PSDA5PKW4 1024 aaPredicted RBP15.66■□□□□ 0.1
CHKA-205ENST00000530730 MMRN1Q13201 1228 aa15.66■□□□□ 0.1
CHKA-205ENST00000530730 LHX6Q9UPM6 363 aa15.66■□□□□ 0.1
CHKA-205ENST00000530730 MFSD10Q14728 455 aa15.65■□□□□ 0.1
CHKA-205ENST00000530730 OXER1Q8TDS5 423 aa15.65■□□□□ 0.1
CHKA-205ENST00000530730 PBX2P40425 430 aa15.61■□□□□ 0.09
CHKA-205ENST00000530730 DDX27Q96GQ7 796 aaKnown RBP15.61■□□□□ 0.09
CHKA-205ENST00000530730 LARP6Q9BRS8 491 aaKnown RBP15.6■□□□□ 0.09
CHKA-205ENST00000530730 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.57■□□□□ 0.08
CHKA-205ENST00000530730 CADPS2Q86UW7 1296 aa15.55■□□□□ 0.08
CHKA-205ENST00000530730 SPRYD3Q8NCJ5 442 aa15.54■□□□□ 0.08
CHKA-205ENST00000530730 UPF1Q92900 1129 aaKnown RBP eCLIP15.51■□□□□ 0.07
CHKA-205ENST00000530730 PTGER2P43116 358 aa15.5■□□□□ 0.07
CHKA-205ENST00000530730 LSM11P83369 360 aaKnown RBP eCLIP15.5■□□□□ 0.07
CHKA-205ENST00000530730 POTEEQ6S8J3 1075 aa15.5■□□□□ 0.07
CHKA-205ENST00000530730 PPP4R3BQ5MIZ7 849 aa15.47■□□□□ 0.07
CHKA-205ENST00000530730 ANO8Q9HCE9 1232 aaPredicted RBP15.47■□□□□ 0.07
CHKA-205ENST00000530730 ARHGAP33O14559 1287 aa15.45■□□□□ 0.06
CHKA-205ENST00000530730 CAMK2BQ13554 666 aa15.43■□□□□ 0.06
CHKA-205ENST00000530730 EMILIN3Q9NT22 766 aa15.42■□□□□ 0.06
CHKA-205ENST00000530730 ANKRD13DQ6ZTN6 518 aa15.41■□□□□ 0.06
CHKA-205ENST00000530730 AXIN2Q9Y2T1 843 aa15.4■□□□□ 0.06
CHKA-205ENST00000530730 EVI5O60447 810 aa15.39■□□□□ 0.05
CHKA-205ENST00000530730 MYT1LQ9UL68 1186 aa15.39■□□□□ 0.05
CHKA-205ENST00000530730 FOSBP53539 338 aa15.38■□□□□ 0.05
CHKA-205ENST00000530730 MAP3K9P80192 1104 aa15.38■□□□□ 0.05
CHKA-205ENST00000530730 PAXIP1Q6ZW49 1069 aaPredicted RBP15.37■□□□□ 0.05
CHKA-205ENST00000530730 RNF166Q96A37 237 aaPredicted RBP15.36■□□□□ 0.05
CHKA-205ENST00000530730 JPH4Q96JJ6 628 aa15.36■□□□□ 0.05
CHKA-205ENST00000530730 TK2O00142 265 aa15.35■□□□□ 0.05
CHKA-205ENST00000530730 ZNF454Q8N9F8 522 aa15.34■□□□□ 0.05
CHKA-205ENST00000530730 CFAP44Q96MT7 982 aa15.33■□□□□ 0.04
CHKA-205ENST00000530730 BCL2L12Q9HB09 334 aa15.33■□□□□ 0.04
CHKA-205ENST00000530730 ADGRD1Q6QNK2 874 aa15.31■□□□□ 0.04
CHKA-205ENST00000530730 KCNH8Q96L42 1107 aa15.31■□□□□ 0.04
CHKA-205ENST00000530730 PSEN2P49810 448 aa15.3■□□□□ 0.04
CHKA-205ENST00000530730 DMRTA1Q5VZB9 504 aa15.28■□□□□ 0.04
CHKA-205ENST00000530730 ZDHHC16Q969W1 377 aa15.26■□□□□ 0.03
CHKA-205ENST00000530730 KCNK17Q96T54 332 aa15.25■□□□□ 0.03
CHKA-205ENST00000530730 SLC4A5Q9BY07 1137 aa15.25■□□□□ 0.03
CHKA-205ENST00000530730 HRO43593 1189 aa15.24■□□□□ 0.03
CHKA-205ENST00000530730 DPYSL4O14531 572 aa15.22■□□□□ 0.03
CHKA-205ENST00000530730 PTPREP23469 700 aa15.22■□□□□ 0.03
CHKA-205ENST00000530730 PCDHGA10Q9Y5H3 936 aa15.21■□□□□ 0.03
CHKA-205ENST00000530730 PHF14O94880 888 aa15.2■□□□□ 0.02
CHKA-205ENST00000530730 ARIH1Q9Y4X5 557 aaPredicted RBP15.2■□□□□ 0.02
CHKA-205ENST00000530730 FBXW7Q969H0 707 aa15.19■□□□□ 0.02
CHKA-205ENST00000530730 ADAM33Q9BZ11 813 aa15.19■□□□□ 0.02
CHKA-205ENST00000530730 E2F4Q16254 413 aa15.18■□□□□ 0.02
CHKA-205ENST00000530730 VPS9D1Q9Y2B5 631 aa15.17■□□□□ 0.02
CHKA-205ENST00000530730 TYW1BQ6NUM6 668 aa15.16■□□□□ 0.02
CHKA-205ENST00000530730 WDR70Q9NW82 654 aa15.16■□□□□ 0.02
CHKA-205ENST00000530730 PDIA6Q15084 440 aa15.15■□□□□ 0.02
CHKA-205ENST00000530730 EPAS1Q99814 870 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms