RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 MLLT3P42568 568 aaPredicted RBP3.79□□□□□ -1.8
FGFR1-235ENST00000530701 RANGAP1P46060 587 aaPredicted RBP3.79□□□□□ -1.8
FGFR1-235ENST00000530701 PDE4DQ08499 809 aa3.79□□□□□ -1.8
FGFR1-235ENST00000530701 G3V3G9 751 aa3.78□□□□□ -1.8
FGFR1-235ENST00000530701 DPYSL4O14531 572 aa3.78□□□□□ -1.8
FGFR1-235ENST00000530701 CD44P16070 742 aaKnown RBP3.78□□□□□ -1.8
FGFR1-235ENST00000530701 TMC2Q8TDI7 906 aa3.78□□□□□ -1.8
FGFR1-235ENST00000530701 DDRGK1Q96HY6 314 aa3.78□□□□□ -1.8
FGFR1-235ENST00000530701 MS4A4AQ96JQ5 239 aa3.78□□□□□ -1.8
FGFR1-235ENST00000530701 GPHNQ9NQX3 736 aaPredicted RBP3.78□□□□□ -1.8
FGFR1-235ENST00000530701 PODXL2Q9NZ53 605 aa3.78□□□□□ -1.8
FGFR1-235ENST00000530701 NUTM2FA1L443 756 aa3.77□□□□□ -1.81
FGFR1-235ENST00000530701 ZNF316A6NFI3 1004 aaPredicted RBP3.77□□□□□ -1.81
FGFR1-235ENST00000530701 TRIM66O15016 1216 aa3.77□□□□□ -1.81
FGFR1-235ENST00000530701 FXR2P51116 673 aaKnown RBP eCLIP3.77□□□□□ -1.81
FGFR1-235ENST00000530701 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.77□□□□□ -1.81
FGFR1-235ENST00000530701 MINK1Q8N4C8 1332 aaPredicted RBP3.76□□□□□ -1.81
FGFR1-235ENST00000530701 MAP3K9P80192 1104 aa3.76□□□□□ -1.81
FGFR1-235ENST00000530701 PDIA6Q15084 440 aa3.76□□□□□ -1.81
FGFR1-235ENST00000530701 PHF12Q96QT6 1004 aa3.76□□□□□ -1.81
FGFR1-235ENST00000530701 ARID3AQ99856 593 aa3.76□□□□□ -1.81
FGFR1-235ENST00000530701 GRXCR2A6NFK2 248 aa3.75□□□□□ -1.81
FGFR1-235ENST00000530701 FLIIQ13045 1269 aa3.75□□□□□ -1.81
FGFR1-235ENST00000530701 UBTFP17480 764 aaKnown RBP3.74□□□□□ -1.81
FGFR1-235ENST00000530701 MAP2K5Q13163 448 aa3.74□□□□□ -1.81
FGFR1-235ENST00000530701 DSG2Q14126 1118 aa3.74□□□□□ -1.81
FGFR1-235ENST00000530701 TTLL12Q14166 644 aaPredicted RBP3.74□□□□□ -1.81
FGFR1-235ENST00000530701 ATP1B4Q9UN42 357 aaPredicted RBP3.74□□□□□ -1.81
FGFR1-235ENST00000530701 FCHSD2O94868 740 aa3.73□□□□□ -1.81
FGFR1-235ENST00000530701 FOXK1P85037 733 aa3.73□□□□□ -1.81
FGFR1-235ENST00000530701 CHRDL2Q6WN34 429 aa3.73□□□□□ -1.81
FGFR1-235ENST00000530701 CCDC102AQ96A19 550 aa3.73□□□□□ -1.81
FGFR1-235ENST00000530701 FAM117AQ9C073 453 aa3.73□□□□□ -1.81
FGFR1-235ENST00000530701 EMILIN3Q9NT22 766 aa3.73□□□□□ -1.81
FGFR1-235ENST00000530701 IRF6O14896 467 aa3.72□□□□□ -1.81
FGFR1-235ENST00000530701 GNPATO15228 680 aa3.72□□□□□ -1.81
FGFR1-235ENST00000530701 TIE1P35590 1138 aa3.72□□□□□ -1.81
FGFR1-235ENST00000530701 HIC1Q14526 733 aa3.72□□□□□ -1.81
FGFR1-235ENST00000530701 PLPP6Q8IY26 295 aa3.72□□□□□ -1.81
FGFR1-235ENST00000530701 PIP4P2Q8N4L2 257 aa3.72□□□□□ -1.81
FGFR1-235ENST00000530701 MS4A3Q96HJ5 214 aa3.72□□□□□ -1.81
FGFR1-235ENST00000530701 TTLL13PA6NNM8 815 aa3.71□□□□□ -1.82
FGFR1-235ENST00000530701 APBB1O00213 710 aa3.71□□□□□ -1.82
FGFR1-235ENST00000530701 TBC1D12O60347 775 aa3.71□□□□□ -1.82
FGFR1-235ENST00000530701 AMHR2Q16671 573 aa3.71□□□□□ -1.82
FGFR1-235ENST00000530701 MICALL2Q8IY33 904 aa3.71□□□□□ -1.82
FGFR1-235ENST00000530701 PCMTD1Q96MG8 357 aaPredicted RBP3.71□□□□□ -1.82
FGFR1-235ENST00000530701 ZBTB7CA1YPR0 619 aa3.7□□□□□ -1.82
FGFR1-235ENST00000530701 PDIA4P13667 645 aaKnown RBP3.7□□□□□ -1.82
FGFR1-235ENST00000530701 PARP9Q8IXQ6 854 aa3.7□□□□□ -1.82
FGFR1-235ENST00000530701 UPF1Q92900 1129 aaKnown RBP eCLIP3.7□□□□□ -1.82
FGFR1-235ENST00000530701 GOPCQ9HD26 462 aa3.7□□□□□ -1.82
FGFR1-235ENST00000530701 TRIM35Q9UPQ4 493 aa3.7□□□□□ -1.82
FGFR1-235ENST00000530701 ARID3CA6NKF2 412 aa3.69□□□□□ -1.82
FGFR1-235ENST00000530701 DDX12PQ92771 950 aa3.69□□□□□ -1.82
FGFR1-235ENST00000530701 PLEKHG3A1L390 1219 aa3.68□□□□□ -1.82
FGFR1-235ENST00000530701 C2orf72A6NCS6 295 aa3.68□□□□□ -1.82
FGFR1-235ENST00000530701 GPR37O15354 613 aa3.68□□□□□ -1.82
FGFR1-235ENST00000530701 RAD21O60216 631 aa3.68□□□□□ -1.82
FGFR1-235ENST00000530701 GIGYF2Q6Y7W6 1299 aaKnown RBP3.68□□□□□ -1.82
FGFR1-235ENST00000530701 ILDR1Q86SU0 546 aaPredicted RBP3.68□□□□□ -1.82
FGFR1-235ENST00000530701 TRPC6Q9Y210 931 aa3.68□□□□□ -1.82
FGFR1-235ENST00000530701 BOLA1Q9Y3E2 137 aa3.68□□□□□ -1.82
FGFR1-235ENST00000530701 OSBPP22059 807 aa3.67□□□□□ -1.82
FGFR1-235ENST00000530701 CLCN1P35523 988 aa3.67□□□□□ -1.82
FGFR1-235ENST00000530701 TRIM26Q12899 539 aaPredicted RBP3.67□□□□□ -1.82
FGFR1-235ENST00000530701 DPY19L2Q6NUT2 758 aa3.67□□□□□ -1.82
FGFR1-235ENST00000530701 L3MBTL3Q96JM7 780 aaPredicted RBP3.67□□□□□ -1.82
FGFR1-235ENST00000530701 BMP2KQ9NSY1 1161 aaPredicted RBP3.67□□□□□ -1.82
FGFR1-235ENST00000530701 A6NJR5 290 aa3.66□□□□□ -1.82
FGFR1-235ENST00000530701 PLCG2P16885 1265 aa3.66□□□□□ -1.82
FGFR1-235ENST00000530701 PTGER2P43116 358 aa3.66□□□□□ -1.82
FGFR1-235ENST00000530701 CLCN6P51797 869 aa3.66□□□□□ -1.82
FGFR1-235ENST00000530701 PTGDRQ13258 359 aa3.66□□□□□ -1.82
FGFR1-235ENST00000530701 CCDC97Q96F63 343 aaPredicted RBP3.66□□□□□ -1.82
FGFR1-235ENST00000530701 OCEL1Q9H607 264 aa3.66□□□□□ -1.82
FGFR1-235ENST00000530701 EVI5O60447 810 aa3.65□□□□□ -1.83
FGFR1-235ENST00000530701 FECHP22830 423 aa3.65□□□□□ -1.83
FGFR1-235ENST00000530701 IER5LQ5T953 404 aa3.65□□□□□ -1.83
FGFR1-235ENST00000530701 NPM2Q86SE8 214 aaKnown RBP3.65□□□□□ -1.83
FGFR1-235ENST00000530701 CCDC82Q8N4S0 544 aa3.65□□□□□ -1.83
FGFR1-235ENST00000530701 C1orf115Q9H7X2 142 aa3.65□□□□□ -1.83
FGFR1-235ENST00000530701 CCDC9Q9Y3X0 531 aaKnown RBP3.65□□□□□ -1.83
FGFR1-235ENST00000530701 C19orf67A6NJJ6 358 aa3.64□□□□□ -1.83
FGFR1-235ENST00000530701 MAP3K7O43318 606 aa3.64□□□□□ -1.83
FGFR1-235ENST00000530701 TRAK2O60296 914 aa3.64□□□□□ -1.83
FGFR1-235ENST00000530701 SEC24BO95487 1268 aa3.64□□□□□ -1.83
FGFR1-235ENST00000530701 SH3D19Q5HYK7 790 aa3.64□□□□□ -1.83
FGFR1-235ENST00000530701 PDCD7Q8N8D1 485 aaKnown RBP3.64□□□□□ -1.83
FGFR1-235ENST00000530701 CLUAP1Q96AJ1 413 aa3.64□□□□□ -1.83
FGFR1-235ENST00000530701 GPCPD1Q9NPB8 672 aa3.64□□□□□ -1.83
FGFR1-235ENST00000530701 KIF3CO14782 793 aa3.63□□□□□ -1.83
FGFR1-235ENST00000530701 MS4A1P11836 297 aa3.63□□□□□ -1.83
FGFR1-235ENST00000530701 MCM6Q14566 821 aa3.63□□□□□ -1.83
FGFR1-235ENST00000530701 SKIV2LQ15477 1246 aaKnown RBP3.63□□□□□ -1.83
FGFR1-235ENST00000530701 PROSER2Q86WR7 435 aaPredicted RBP3.63□□□□□ -1.83
FGFR1-235ENST00000530701 WWC1Q8IX03 1113 aa3.63□□□□□ -1.83
FGFR1-235ENST00000530701 OXER1Q8TDS5 423 aa3.63□□□□□ -1.83
FGFR1-235ENST00000530701 TMEM121BQ9BXQ6 578 aaPredicted RBP3.63□□□□□ -1.83
FGFR1-235ENST00000530701 SERPINA10Q9UK55 444 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms