RNA–Protein interactions for RNA: ENST00000530669.1

PUM1-221, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-221ENST00000530669 HFM1A2PYH4 1435 aa15.63■□□□□ 0.09
PUM1-221ENST00000530669 AKNAQ7Z591 1439 aa15.63■□□□□ 0.09
PUM1-221ENST00000530669 ZCCHC11Q5TAX3 1644 aaKnown RBP15.62■□□□□ 0.09
PUM1-221ENST00000530669 ACIN1Q9UKV3 1341 aaKnown RBP15.62■□□□□ 0.09
PUM1-221ENST00000530669 DNMT1P26358 1616 aaKnown RBP15.61■□□□□ 0.09
PUM1-221ENST00000530669 ROCK1Q13464 1354 aa15.6■□□□□ 0.09
PUM1-221ENST00000530669 ABCC5O15440 1437 aa15.59■□□□□ 0.09
PUM1-221ENST00000530669 DAPK1P53355 1430 aa15.59■□□□□ 0.09
PUM1-221ENST00000530669 NAIPQ13075 1403 aa15.59■□□□□ 0.09
PUM1-221ENST00000530669 ZNF644Q9H582 1327 aaPredicted RBP15.58■□□□□ 0.08
PUM1-221ENST00000530669 CAMSAP2Q08AD1 1489 aa15.58■□□□□ 0.08
PUM1-221ENST00000530669 CDC42BPBQ9Y5S2 1711 aa15.55■□□□□ 0.08
PUM1-221ENST00000530669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.55■□□□□ 0.08
PUM1-221ENST00000530669 RSPH4AQ5TD94 716 aa15.55■□□□□ 0.08
PUM1-221ENST00000530669 GCC2Q8IWJ2 1684 aa15.54■□□□□ 0.08
PUM1-221ENST00000530669 PREX2Q70Z35 1606 aa15.54■□□□□ 0.08
PUM1-221ENST00000530669 ZNF777Q9ULD5 760 aaPredicted RBP15.53■□□□□ 0.08
PUM1-221ENST00000530669 MYO5CQ9NQX4 1742 aa15.52■□□□□ 0.08
PUM1-221ENST00000530669 CHIC2Q9UKJ5 165 aa15.52■□□□□ 0.08
PUM1-221ENST00000530669 ARHGEF5Q12774 1597 aa15.51■□□□□ 0.07
PUM1-221ENST00000530669 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
PUM1-221ENST00000530669 KCNH8Q96L42 1107 aa15.51■□□□□ 0.07
PUM1-221ENST00000530669 RRP7BPQ9NSQ0 103 aa15.51■□□□□ 0.07
PUM1-221ENST00000530669 PLCH2O75038 1416 aa15.51■□□□□ 0.07
PUM1-221ENST00000530669 TTC37Q6PGP7 1564 aa15.5■□□□□ 0.07
PUM1-221ENST00000530669 ADGRL2O95490 1459 aa15.5■□□□□ 0.07
PUM1-221ENST00000530669 ARAP3Q8WWN8 1544 aa15.49■□□□□ 0.07
PUM1-221ENST00000530669 CROCC2H7BZ55 1655 aa15.49■□□□□ 0.07
PUM1-221ENST00000530669 ADGBQ8N7X0 1667 aa15.49■□□□□ 0.07
PUM1-221ENST00000530669 PLEKHH2Q8IVE3 1493 aa15.49■□□□□ 0.07
PUM1-221ENST00000530669 SHANK2Q9UPX8 1470 aa15.49■□□□□ 0.07
PUM1-221ENST00000530669 WDR7Q9Y4E6 1490 aa15.49■□□□□ 0.07
PUM1-221ENST00000530669 KIAA1107Q9UPP5 1409 aa15.49■□□□□ 0.07
PUM1-221ENST00000530669 MBD5Q9P267 1494 aa15.48■□□□□ 0.07
PUM1-221ENST00000530669 EFCAB2Q5VUJ9 269 aa15.48■□□□□ 0.07
PUM1-221ENST00000530669 NCOA1Q15788 1441 aa15.48■□□□□ 0.07
PUM1-221ENST00000530669 TSPY4P0CV99 314 aa15.47■□□□□ 0.07
PUM1-221ENST00000530669 TSPY10P0CW01 314 aa15.47■□□□□ 0.07
PUM1-221ENST00000530669 SAMD9LQ8IVG5 1584 aa15.46■□□□□ 0.07
PUM1-221ENST00000530669 MAPKBP1O60336 1514 aa15.46■□□□□ 0.07
PUM1-221ENST00000530669 ARHGAP5Q13017 1502 aa15.46■□□□□ 0.07
PUM1-221ENST00000530669 ANKRD30AQ9BXX3 1397 aa15.46■□□□□ 0.07
PUM1-221ENST00000530669 ASXL2Q76L83 1435 aa15.45■□□□□ 0.06
PUM1-221ENST00000530669 ABCA9Q8IUA7 1624 aa15.44■□□□□ 0.06
PUM1-221ENST00000530669 HNRNPMP52272 730 aaKnown RBP eCLIP15.44■□□□□ 0.061e-6■□□□□ 9.4
PUM1-221ENST00000530669 TIMELESSQ9UNS1 1208 aa15.44■□□□□ 0.06
PUM1-221ENST00000530669 CCDC141Q6ZP82 1450 aa15.43■□□□□ 0.06
PUM1-221ENST00000530669 C9orf84Q5VXU9 1444 aa15.42■□□□□ 0.06
PUM1-221ENST00000530669 MAST1Q9Y2H9 1570 aa15.41■□□□□ 0.06
PUM1-221ENST00000530669 KDM6BO15054 1643 aa15.4■□□□□ 0.06
PUM1-221ENST00000530669 RIMBP3CA6NJZ7 1639 aa15.39■□□□□ 0.05
PUM1-221ENST00000530669 RIMBP3BA6NNM3 1639 aa15.39■□□□□ 0.05
PUM1-221ENST00000530669 RIMBP3Q9UFD9 1639 aa15.39■□□□□ 0.05
PUM1-221ENST00000530669 TRIM52Q96A61 297 aa15.37■□□□□ 0.05
PUM1-221ENST00000530669 SYCP2Q9BX26 1530 aa15.37■□□□□ 0.05
PUM1-221ENST00000530669 ANKRD50Q9ULJ7 1429 aa15.36■□□□□ 0.05
PUM1-221ENST00000530669 MPHOSPH9Q99550 1183 aa15.36■□□□□ 0.05
PUM1-221ENST00000530669 ABCC1P33527 1531 aa15.35■□□□□ 0.05
PUM1-221ENST00000530669 ARHGEF12Q9NZN5 1544 aa15.35■□□□□ 0.05
PUM1-221ENST00000530669 CYB5RLQ6IPT4 315 aa15.35■□□□□ 0.05
PUM1-221ENST00000530669 SIN3AQ96ST3 1273 aa15.32■□□□□ 0.04
PUM1-221ENST00000530669 KIF15Q9NS87 1388 aa15.32■□□□□ 0.04
PUM1-221ENST00000530669 RTEL1-TNFRSF6BF6WH68 1400 aa15.32■□□□□ 0.04
PUM1-221ENST00000530669 FANCAO15360 1455 aa15.32■□□□□ 0.04
PUM1-221ENST00000530669 PLXNC1O60486 1568 aa15.32■□□□□ 0.04
PUM1-221ENST00000530669 DENND4BO75064 1496 aaPredicted RBP15.31■□□□□ 0.04
PUM1-221ENST00000530669 CD109Q6YHK3 1445 aa15.29■□□□□ 0.04
PUM1-221ENST00000530669 TRAPPC8Q9Y2L5 1435 aa15.29■□□□□ 0.04
PUM1-221ENST00000530669 NEUROD1Q13562 356 aa15.28■□□□□ 0.04
PUM1-221ENST00000530669 SLC4A1APQ9BWU0 796 aaKnown RBP15.28■□□□□ 0.04
PUM1-221ENST00000530669 CFAP74Q9C0B2 1584 aa15.28■□□□□ 0.04
PUM1-221ENST00000530669 KDM5DQ9BY66 1539 aa15.27■□□□□ 0.04
PUM1-221ENST00000530669 DUOX2Q9NRD8 1548 aa15.27■□□□□ 0.04
PUM1-221ENST00000530669 PZPP20742 1482 aa15.27■□□□□ 0.04
PUM1-221ENST00000530669 ZNF316A6NFI3 1004 aaPredicted RBP15.27■□□□□ 0.04
PUM1-221ENST00000530669 GLI2P10070 1586 aa15.27■□□□□ 0.03
PUM1-221ENST00000530669 ANKRD30BQ9BXX2 1392 aa15.26■□□□□ 0.03
PUM1-221ENST00000530669 SPAG9O60271 1321 aaKnown RBP15.26■□□□□ 0.03
PUM1-221ENST00000530669 ADGRL1O94910 1474 aa15.26■□□□□ 0.03
PUM1-221ENST00000530669 SCAPERQ9BY12 1400 aa15.26■□□□□ 0.03
PUM1-221ENST00000530669 PPP1R15AO75807 674 aaPredicted RBP15.25■□□□□ 0.03
PUM1-221ENST00000530669 AFAP1Q8N556 730 aa15.24■□□□□ 0.03
PUM1-221ENST00000530669 NUP155O75694 1391 aa15.24■□□□□ 0.03
PUM1-221ENST00000530669 NEO1Q92859 1461 aa15.23■□□□□ 0.03
PUM1-221ENST00000530669 ERBINQ96RT1 1412 aa15.23■□□□□ 0.03
PUM1-221ENST00000530669 TONSLQ96HA7 1378 aa15.22■□□□□ 0.03
PUM1-221ENST00000530669 MAP3K4Q9Y6R4 1608 aa15.21■□□□□ 0.02
PUM1-221ENST00000530669 UNC13BO14795 1591 aa15.2■□□□□ 0.02
PUM1-221ENST00000530669 ZFYVE16Q7Z3T8 1539 aa15.2■□□□□ 0.02
PUM1-221ENST00000530669 INO80Q9ULG1 1556 aaPredicted RBP15.19■□□□□ 0.02
PUM1-221ENST00000530669 PKD2Q13563 968 aa15.19■□□□□ 0.02
PUM1-221ENST00000530669 ATP7AQ04656 1500 aa15.18■□□□□ 0.02
PUM1-221ENST00000530669 ZNF518AQ6AHZ1 1483 aa15.18■□□□□ 0.02
PUM1-221ENST00000530669 RPRD2Q5VT52 1461 aaKnown RBP15.17■□□□□ 0.02
PUM1-221ENST00000530669 PIAS4Q8N2W9 510 aaPredicted RBP15.17■□□□□ 0.02
PUM1-221ENST00000530669 MAGI2Q86UL8 1455 aa15.16■□□□□ 0.02
PUM1-221ENST00000530669 MLH3Q9UHC1 1453 aa15.15■□□□□ 0.02
PUM1-221ENST00000530669 DHX29Q7Z478 1369 aaKnown RBP15.15■□□□□ 0.02
PUM1-221ENST00000530669 IQGAP3Q86VI3 1631 aa15.15■□□□□ 0.02
PUM1-221ENST00000530669 FAM135AQ9P2D6 1515 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms