RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 FMN1Q68DA7 1419 aa10.87□□□□□ -0.67
CTNND1-221ENST00000529873 NOP58Q9Y2X3 529 aaKnown RBP10.87□□□□□ -0.67
CTNND1-221ENST00000529873 HSPA5P11021 654 aaKnown RBP10.86□□□□□ -0.67
CTNND1-221ENST00000529873 CFAP44Q96MT7 982 aa10.86□□□□□ -0.67
CTNND1-221ENST00000529873 HDGFL2Q7Z4V5 671 aaPredicted RBP10.86□□□□□ -0.67
CTNND1-221ENST00000529873 EIF3AQ14152 1382 aaKnown RBP10.86□□□□□ -0.67
CTNND1-221ENST00000529873 ROCK2O75116 1388 aaKnown RBP10.86□□□□□ -0.67
CTNND1-221ENST00000529873 MCCP23508 829 aa10.85□□□□□ -0.67
CTNND1-221ENST00000529873 GOLGA2Q08379 1002 aa10.85□□□□□ -0.67
CTNND1-221ENST00000529873 HSCBQ8IWL3 235 aa10.85□□□□□ -0.67
CTNND1-221ENST00000529873 KCNJ4P48050 445 aa10.85□□□□□ -0.67
CTNND1-221ENST00000529873 FGD1P98174 961 aa10.84□□□□□ -0.67
CTNND1-221ENST00000529873 MLECQ14165 292 aa10.84□□□□□ -0.67
CTNND1-221ENST00000529873 RTF1Q92541 710 aaKnown RBP10.84□□□□□ -0.67
CTNND1-221ENST00000529873 ANKRD30AQ9BXX3 1397 aa10.84□□□□□ -0.67
CTNND1-221ENST00000529873 PKD2Q13563 968 aa10.83□□□□□ -0.68
CTNND1-221ENST00000529873 WIZO95785 1651 aa10.82□□□□□ -0.68
CTNND1-221ENST00000529873 NAP1L2Q9ULW6 460 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-221ENST00000529873 TULP1O00294 542 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-221ENST00000529873 NRDCO43847 1150 aa10.82□□□□□ -0.68
CTNND1-221ENST00000529873 TRHP20396 242 aaPredicted RBP10.81□□□□□ -0.68
CTNND1-221ENST00000529873 CALD1Q05682 793 aaKnown RBP10.81□□□□□ -0.68
CTNND1-221ENST00000529873 RALBP1Q15311 655 aa10.8□□□□□ -0.68
CTNND1-221ENST00000529873 SAFB2Q14151 953 aaKnown RBP eCLIP10.8□□□□□ -0.68
CTNND1-221ENST00000529873 TAOK2Q9UL54 1235 aa10.8□□□□□ -0.68
CTNND1-221ENST00000529873 PTMSP20962 102 aa10.8□□□□□ -0.68
CTNND1-221ENST00000529873 B4GALNT3Q6L9W6 998 aa10.8□□□□□ -0.68
CTNND1-221ENST00000529873 GGT6Q6P531 493 aa10.79□□□□□ -0.68
CTNND1-221ENST00000529873 STK26Q9P289 416 aa10.79□□□□□ -0.68
CTNND1-221ENST00000529873 RAB3GAP2Q9H2M9 1393 aa10.79□□□□□ -0.68
CTNND1-221ENST00000529873 RAPGEF2Q9Y4G8 1499 aa10.79□□□□□ -0.68
CTNND1-221ENST00000529873 SOX12O15370 315 aa10.79□□□□□ -0.68
CTNND1-221ENST00000529873 IPO8O15397 1037 aaKnown RBP10.79□□□□□ -0.68
CTNND1-221ENST00000529873 PLCB2Q00722 1185 aa10.79□□□□□ -0.68
CTNND1-221ENST00000529873 MPHOSPH9Q99550 1183 aa10.79□□□□□ -0.68
CTNND1-221ENST00000529873 CCDC18Q5T9S5 1454 aa10.78□□□□□ -0.68
CTNND1-221ENST00000529873 CHAF1AQ13111 956 aaPredicted RBP10.78□□□□□ -0.68
CTNND1-221ENST00000529873 NUP155O75694 1391 aa10.78□□□□□ -0.68
CTNND1-221ENST00000529873 KANK4Q5T7N3 995 aaPredicted RBP10.77□□□□□ -0.68
CTNND1-221ENST00000529873 GOLGA6L4A6NEF3 574 aa10.77□□□□□ -0.68
CTNND1-221ENST00000529873 RTN4Q9NQC3 1192 aaKnown RBP10.77□□□□□ -0.69
CTNND1-221ENST00000529873 FOXD1Q16676 465 aa10.77□□□□□ -0.69
CTNND1-221ENST00000529873 L1TD1Q5T7N2 865 aaKnown RBP10.76□□□□□ -0.69
CTNND1-221ENST00000529873 EFCAB2Q5VUJ9 269 aa10.76□□□□□ -0.69
CTNND1-221ENST00000529873 PAK3O75914 559 aaPredicted RBP10.74□□□□□ -0.69
CTNND1-221ENST00000529873 ITPRIPQ8IWB1 547 aa10.73□□□□□ -0.69
CTNND1-221ENST00000529873 RWDD1Q9H446 243 aaPredicted RBP10.73□□□□□ -0.69
CTNND1-221ENST00000529873 TDRD9Q8NDG6 1382 aaKnown RBP10.73□□□□□ -0.69
CTNND1-221ENST00000529873 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.73□□□□□ -0.69
CTNND1-221ENST00000529873 DEKP35659 375 aaKnown RBP10.73□□□□□ -0.69
CTNND1-221ENST00000529873 A0A0U1RQG5 324 aaPredicted RBP10.73□□□□□ -0.69
CTNND1-221ENST00000529873 FHOD3Q2V2M9 1422 aa10.72□□□□□ -0.69
CTNND1-221ENST00000529873 GNL2Q13823 731 aaKnown RBP10.72□□□□□ -0.69
CTNND1-221ENST00000529873 PMFBP1Q8TBY8 1022 aa10.72□□□□□ -0.69
CTNND1-221ENST00000529873 RCAN3Q9UKA8 241 aa10.72□□□□□ -0.69
CTNND1-221ENST00000529873 TNNT3P45378 269 aaPredicted RBP10.72□□□□□ -0.69
CTNND1-221ENST00000529873 KIAA1211Q6ZU35 1233 aa10.72□□□□□ -0.69
CTNND1-221ENST00000529873 U2AF1L5P0DN76 240 aaPredicted RBP10.72□□□□□ -0.69
CTNND1-221ENST00000529873 U2AF1Q01081 240 aaKnown RBP eCLIP10.72□□□□□ -0.692e-10■■□□□ 12.3
CTNND1-221ENST00000529873 SPAG9O60271 1321 aaKnown RBP10.72□□□□□ -0.69
CTNND1-221ENST00000529873 CSB-PGBD3P0DP91 1061 aa10.71□□□□□ -0.69
CTNND1-221ENST00000529873 AMER1Q5JTC6 1135 aaPredicted RBP10.71□□□□□ -0.69
CTNND1-221ENST00000529873 SPRYD3Q8NCJ5 442 aa10.71□□□□□ -0.69
CTNND1-221ENST00000529873 SMARCA4P51532 1647 aa10.71□□□□□ -0.69
CTNND1-221ENST00000529873 VSIG10Q8N0Z9 540 aa10.71□□□□□ -0.7
CTNND1-221ENST00000529873 CHMP4AQ9BY43 222 aa10.71□□□□□ -0.7
CTNND1-221ENST00000529873 RSPH4AQ5TD94 716 aa10.7□□□□□ -0.7
CTNND1-221ENST00000529873 MSNP26038 577 aaKnown RBP10.7□□□□□ -0.7
CTNND1-221ENST00000529873 DRC7Q8IY82 874 aa10.7□□□□□ -0.7
CTNND1-221ENST00000529873 TERF2IPQ9NYB0 399 aa10.7□□□□□ -0.7
CTNND1-221ENST00000529873 HNRNPMP52272 730 aaKnown RBP eCLIP10.7□□□□□ -0.75e-7■■■■□ 21
CTNND1-221ENST00000529873 GPATCH3Q96I76 525 aa10.69□□□□□ -0.7
CTNND1-221ENST00000529873 CADPSQ9ULU8 1353 aa10.69□□□□□ -0.7
CTNND1-221ENST00000529873 UACAQ9BZF9 1416 aa10.68□□□□□ -0.7
CTNND1-221ENST00000529873 GBP4Q96PP9 640 aa10.68□□□□□ -0.7
CTNND1-221ENST00000529873 PHLDB1Q86UU1 1377 aa10.68□□□□□ -0.7
CTNND1-221ENST00000529873 APBB1O00213 710 aa10.68□□□□□ -0.7
CTNND1-221ENST00000529873 EID1Q9Y6B2 187 aa10.68□□□□□ -0.7
CTNND1-221ENST00000529873 KIF3BO15066 747 aa10.68□□□□□ -0.7
CTNND1-221ENST00000529873 STK31Q9BXU1 1019 aa10.68□□□□□ -0.7
CTNND1-221ENST00000529873 KIF15Q9NS87 1388 aa10.67□□□□□ -0.7
CTNND1-221ENST00000529873 CLSTN1O94985 981 aa10.67□□□□□ -0.7
CTNND1-221ENST00000529873 TCERG1O14776 1098 aaKnown RBP10.67□□□□□ -0.7
CTNND1-221ENST00000529873 HTATSF1O43719 755 aaKnown RBP10.67□□□□□ -0.7
CTNND1-221ENST00000529873 ISY1Q9ULR0 285 aaKnown RBP10.67□□□□□ -0.7
CTNND1-221ENST00000529873 LMOD3Q0VAK6 560 aa10.66□□□□□ -0.7
CTNND1-221ENST00000529873 RSPH6AQ9H0K4 717 aa10.65□□□□□ -0.7
CTNND1-221ENST00000529873 SMC4Q9NTJ3 1288 aa10.65□□□□□ -0.7
CTNND1-221ENST00000529873 TMX4Q9H1E5 349 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-221ENST00000529873 HDAC5Q9UQL6 1122 aa10.65□□□□□ -0.7
CTNND1-221ENST00000529873 WASHC2CQ9Y4E1 1318 aa10.65□□□□□ -0.7
CTNND1-221ENST00000529873 HMMRO75330 724 aa10.64□□□□□ -0.71
CTNND1-221ENST00000529873 CALRP27797 417 aaKnown RBP10.64□□□□□ -0.71
CTNND1-221ENST00000529873 PDE4CQ08493 712 aa10.64□□□□□ -0.71
CTNND1-221ENST00000529873 RBM19Q9Y4C8 960 aaKnown RBP10.63□□□□□ -0.71
CTNND1-221ENST00000529873 ZNF330Q9Y3S2 320 aaPredicted RBP10.63□□□□□ -0.71
CTNND1-221ENST00000529873 CCDC144AA2RUR9 1427 aa10.63□□□□□ -0.71
CTNND1-221ENST00000529873 SYAP1Q96A49 352 aaPredicted RBP10.63□□□□□ -0.71
CTNND1-221ENST00000529873 ATAD2BQ9ULI0 1458 aa10.63□□□□□ -0.71
CTNND1-221ENST00000529873 KIAA2012Q0VF49 1180 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms