RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 MAP3K13O43283 966 aa6.39□□□□□ -1.39
AMBRA1-208ENST00000529558 KIF12Q96FN5 646 aa6.39□□□□□ -1.39
AMBRA1-208ENST00000529558 FAM117AQ9C073 453 aa6.39□□□□□ -1.39
AMBRA1-208ENST00000529558 C1orf115Q9H7X2 142 aa6.39□□□□□ -1.39
AMBRA1-208ENST00000529558 ARID3AQ99856 593 aa6.38□□□□□ -1.39
AMBRA1-208ENST00000529558 ZNF316A6NFI3 1004 aaPredicted RBP6.37□□□□□ -1.39
AMBRA1-208ENST00000529558 PLEKHG3A1L390 1219 aa6.35□□□□□ -1.39
AMBRA1-208ENST00000529558 SPDYE16A6NNV3 312 aaPredicted RBP6.35□□□□□ -1.39
AMBRA1-208ENST00000529558 FLIIQ13045 1269 aa6.35□□□□□ -1.39
AMBRA1-208ENST00000529558 DDRGK1Q96HY6 314 aa6.35□□□□□ -1.39
AMBRA1-208ENST00000529558 MINK1Q8N4C8 1332 aaPredicted RBP6.34□□□□□ -1.39
AMBRA1-208ENST00000529558 APBB1O00213 710 aa6.34□□□□□ -1.39
AMBRA1-208ENST00000529558 GPR37O15354 613 aa6.34□□□□□ -1.39
AMBRA1-208ENST00000529558 PAK3O75914 559 aaPredicted RBP6.34□□□□□ -1.39
AMBRA1-208ENST00000529558 PPP1R15BQ5SWA1 713 aa6.34□□□□□ -1.39
AMBRA1-208ENST00000529558 NPM2Q86SE8 214 aaKnown RBP6.34□□□□□ -1.39
AMBRA1-208ENST00000529558 GPHNQ9NQX3 736 aaPredicted RBP6.34□□□□□ -1.39
AMBRA1-208ENST00000529558 ARID3CA6NKF2 412 aa6.33□□□□□ -1.4
AMBRA1-208ENST00000529558 DPYSL4O14531 572 aa6.32□□□□□ -1.4
AMBRA1-208ENST00000529558 PRKAR2AP13861 404 aaKnown RBP6.32□□□□□ -1.4
AMBRA1-208ENST00000529558 PDIA6Q15084 440 aa6.32□□□□□ -1.4
AMBRA1-208ENST00000529558 EMILIN3Q9NT22 766 aa6.32□□□□□ -1.4
AMBRA1-208ENST00000529558 AMHR2Q16671 573 aa6.31□□□□□ -1.4
AMBRA1-208ENST00000529558 GOPCQ9HD26 462 aa6.31□□□□□ -1.4
AMBRA1-208ENST00000529558 IRF6O14896 467 aa6.3□□□□□ -1.4
AMBRA1-208ENST00000529558 GOLGA2Q08379 1002 aa6.3□□□□□ -1.4
AMBRA1-208ENST00000529558 MAP2K5Q13163 448 aa6.3□□□□□ -1.4
AMBRA1-208ENST00000529558 ONECUT3O60422 494 aaPredicted RBP6.29□□□□□ -1.4
AMBRA1-208ENST00000529558 PDIA4P13667 645 aaKnown RBP6.29□□□□□ -1.4
AMBRA1-208ENST00000529558 CCDC102AQ96A19 550 aa6.29□□□□□ -1.4
AMBRA1-208ENST00000529558 A6NJR5 290 aa6.28□□□□□ -1.4
AMBRA1-208ENST00000529558 PARP9Q8IXQ6 854 aa6.28□□□□□ -1.4
AMBRA1-208ENST00000529558 DSG2Q14126 1118 aa6.27□□□□□ -1.41
AMBRA1-208ENST00000529558 TMEM106CQ9BVX2 250 aa6.27□□□□□ -1.41
AMBRA1-208ENST00000529558 ZBTB7CA1YPR0 619 aa6.26□□□□□ -1.41
AMBRA1-208ENST00000529558 TRAK2O60296 914 aa6.26□□□□□ -1.41
AMBRA1-208ENST00000529558 FXR2P51116 673 aaKnown RBP eCLIP6.26□□□□□ -1.41
AMBRA1-208ENST00000529558 ILDR1Q86SU0 546 aaPredicted RBP6.26□□□□□ -1.41
AMBRA1-208ENST00000529558 NUTM2FA1L443 756 aa6.25□□□□□ -1.41
AMBRA1-208ENST00000529558 GNPATO15228 680 aa6.25□□□□□ -1.41
AMBRA1-208ENST00000529558 GRXCR2A6NFK2 248 aa6.24□□□□□ -1.41
AMBRA1-208ENST00000529558 FOXK1P85037 733 aa6.24□□□□□ -1.41
AMBRA1-208ENST00000529558 CCDC82Q8N4S0 544 aa6.24□□□□□ -1.41
AMBRA1-208ENST00000529558 CLUAP1Q96AJ1 413 aa6.24□□□□□ -1.41
AMBRA1-208ENST00000529558 HIC1Q14526 733 aa6.23□□□□□ -1.41
AMBRA1-208ENST00000529558 CCDC9Q9Y3X0 531 aaKnown RBP6.23□□□□□ -1.41
AMBRA1-208ENST00000529558 OSBPP22059 807 aa6.22□□□□□ -1.41
AMBRA1-208ENST00000529558 FECHP22830 423 aa6.22□□□□□ -1.41
AMBRA1-208ENST00000529558 NECTIN2Q92692 538 aa6.22□□□□□ -1.41
AMBRA1-208ENST00000529558 PCMTD1Q96MG8 357 aaPredicted RBP6.22□□□□□ -1.41
AMBRA1-208ENST00000529558 ZRANB1Q9UGI0 708 aa6.22□□□□□ -1.41
AMBRA1-208ENST00000529558 FCHSD2O94868 740 aa6.21□□□□□ -1.42
AMBRA1-208ENST00000529558 TMC2Q8TDI7 906 aa6.21□□□□□ -1.42
AMBRA1-208ENST00000529558 PHF12Q96QT6 1004 aa6.21□□□□□ -1.42
AMBRA1-208ENST00000529558 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.21□□□□□ -1.421e-8■□□□□ 10.8
AMBRA1-208ENST00000529558 MS4A1P11836 297 aa6.2□□□□□ -1.42
AMBRA1-208ENST00000529558 MAP3K9P80192 1104 aa6.2□□□□□ -1.42
AMBRA1-208ENST00000529558 TTLL12Q14166 644 aaPredicted RBP6.2□□□□□ -1.42
AMBRA1-208ENST00000529558 TRPC6Q9Y210 931 aa6.2□□□□□ -1.42
AMBRA1-208ENST00000529558 PTGER2P43116 358 aa6.19□□□□□ -1.42
AMBRA1-208ENST00000529558 MCM6Q14566 821 aa6.19□□□□□ -1.42
AMBRA1-208ENST00000529558 GIGYF2Q6Y7W6 1299 aaKnown RBP6.19□□□□□ -1.42
AMBRA1-208ENST00000529558 PLPP6Q8IY26 295 aa6.19□□□□□ -1.42
AMBRA1-208ENST00000529558 MICALL2Q8IY33 904 aa6.18□□□□□ -1.42
AMBRA1-208ENST00000529558 SH3D19Q5HYK7 790 aa6.17□□□□□ -1.42
AMBRA1-208ENST00000529558 DPY19L2Q6NUT2 758 aa6.17□□□□□ -1.42
AMBRA1-208ENST00000529558 REPIN1Q9BWE0 567 aaKnown RBP6.17□□□□□ -1.42
AMBRA1-208ENST00000529558 ZNF777Q9ULD5 760 aaPredicted RBP6.17□□□□□ -1.42
AMBRA1-208ENST00000529558 CD44P16070 742 aaKnown RBP6.16□□□□□ -1.42
AMBRA1-208ENST00000529558 PTGDRQ13258 359 aa6.16□□□□□ -1.42
AMBRA1-208ENST00000529558 PROSER2Q86WR7 435 aaPredicted RBP6.16□□□□□ -1.42
AMBRA1-208ENST00000529558 FNBP4Q8N3X1 1017 aaPredicted RBP6.16□□□□□ -1.42
AMBRA1-208ENST00000529558 TRAIPQ9BWF2 469 aa6.16□□□□□ -1.42
AMBRA1-208ENST00000529558 TTLL13PA6NNM8 815 aa6.15□□□□□ -1.42
AMBRA1-208ENST00000529558 KIF3CO14782 793 aa6.15□□□□□ -1.42
AMBRA1-208ENST00000529558 TIE1P35590 1138 aa6.15□□□□□ -1.42
AMBRA1-208ENST00000529558 OXER1Q8TDS5 423 aa6.15□□□□□ -1.42
AMBRA1-208ENST00000529558 MS4A3Q96HJ5 214 aa6.15□□□□□ -1.42
AMBRA1-208ENST00000529558 TMUB1Q9BVT8 246 aa6.15□□□□□ -1.42
AMBRA1-208ENST00000529558 SERPINA10Q9UK55 444 aa6.15□□□□□ -1.42
AMBRA1-208ENST00000529558 C2orf72A6NCS6 295 aa6.14□□□□□ -1.43
AMBRA1-208ENST00000529558 SKIV2LQ15477 1246 aaKnown RBP6.14□□□□□ -1.43
AMBRA1-208ENST00000529558 DDX12PQ92771 950 aa6.14□□□□□ -1.43
AMBRA1-208ENST00000529558 PRIM1P49642 420 aaKnown RBP6.13□□□□□ -1.43
AMBRA1-208ENST00000529558 PIP4P2Q8N4L2 257 aa6.13□□□□□ -1.43
AMBRA1-208ENST00000529558 KCTD17Q8N5Z5 321 aa6.13□□□□□ -1.43
AMBRA1-208ENST00000529558 TMEM121BQ9BXQ6 578 aaPredicted RBP6.13□□□□□ -1.43
AMBRA1-208ENST00000529558 RAD21O60216 631 aa6.12□□□□□ -1.43
AMBRA1-208ENST00000529558 CLCN1P35523 988 aa6.12□□□□□ -1.43
AMBRA1-208ENST00000529558 POM121Q96HA1 1249 aa6.12□□□□□ -1.43
AMBRA1-208ENST00000529558 UPF1Q92900 1129 aaKnown RBP eCLIP6.11□□□□□ -1.43
AMBRA1-208ENST00000529558 CCDC97Q96F63 343 aaPredicted RBP6.11□□□□□ -1.43
AMBRA1-208ENST00000529558 TBC1D12O60347 775 aa6.1□□□□□ -1.43
AMBRA1-208ENST00000529558 SSTR3P32745 418 aaPredicted RBP6.1□□□□□ -1.43
AMBRA1-208ENST00000529558 PDCD7Q8N8D1 485 aaKnown RBP6.1□□□□□ -1.43
AMBRA1-208ENST00000529558 PROCA1Q8NCQ7 364 aaPredicted RBP6.1□□□□□ -1.43
AMBRA1-208ENST00000529558 GPCPD1Q9NPB8 672 aa6.1□□□□□ -1.43
AMBRA1-208ENST00000529558 BMP2KQ9NSY1 1161 aaPredicted RBP6.1□□□□□ -1.43
AMBRA1-208ENST00000529558 PLSCR2Q9NRY7 297 aa6.09□□□□□ -1.43
AMBRA1-208ENST00000529558 TRIM35Q9UPQ4 493 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms